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Spg039325 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039325
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold10:47008486..47011209
RNA-Seq ExpressionSpg039325
SyntenySpg039325
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW48901.1 hypothetical protein CK203_091224 [Vitis vinifera]2.3e-0844.92Show/hide
Query:  MHAQGDAAKCQERRYVCELVGLAAVDATVSRPALTATTKLALAMLASRPTAISPSALKFTHRNQDPLL-----AFELAVVGGHVGIARAEVSVAGSSRRH
        MH QGDA + + R      V LAA DAT    ALTAT   A AM  SR  A SPSAL+    +   LL      F    +GGH+GIARA++ VAGS+R H
Subjt:  MHAQGDAAKCQERRYVCELVGLAAVDATVSRPALTATTKLALAMLASRPTAISPSALKFTHRNQDPLL-----AFELAVVGGHVGIARAEVSVAGSSRRH

Query:  AVASITACLARSYANLRP
        AV  + A +  S   L P
Subjt:  AVASITACLARSYANLRP
TrEMBL top hitse value%identityAlignment
A0A438EMD2 Uncharacterized protein1.1e-0844.92Show/hide
Query:  MHAQGDAAKCQERRYVCELVGLAAVDATVSRPALTATTKLALAMLASRPTAISPSALKFTHRNQDPLL-----AFELAVVGGHVGIARAEVSVAGSSRRH
        MH QGDA + + R      V LAA DAT    ALTAT   A AM  SR  A SPSAL+    +   LL      F    +GGH+GIARA++ VAGS+R H
Subjt:  MHAQGDAAKCQERRYVCELVGLAAVDATVSRPALTATTKLALAMLASRPTAISPSALKFTHRNQDPLL-----AFELAVVGGHVGIARAEVSVAGSSRRH

Query:  AVASITACLARSYANLRP
        AV  + A +  S   L P
Subjt:  AVASITACLARSYANLRP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCACTCAGTTTCCTTTTCATTTTCATTCTCCTTCTCCTTCTCCTTCAGGCTTTTTCAGAGGCTTCCTCATCTTTCAATGCTATTGCAAATATGCATGCTCAAGG
CGATGCAGCAAAGTGTCAAGAAAGAAGATATGTATGCGAGCTTGTGGGACTTGCTGCAGTCGATGCCACTGTGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCC
TTGCTATGCTCGCCTCAAGACCCACGGCAATAAGCCCAAGTGCCCTTAAATTCACACACAGGAATCAGGATCCACTCTTGGCATTTGAGCTTGCCGTCGTGGGTGGTCAT
GTTGGCATAGCAAGGGCAGAGGTCTCGGTTGCCGGAAGTTCCCGGCGGCACGCAGTGGCATCTATTACAGCATGTCTCGCACGCTCTTATGCAAATCTTCGGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCACTCAGTTTCCTTTTCATTTTCATTCTCCTTCTCCTTCTCCTTCAGGCTTTTTCAGAGGCTTCCTCATCTTTCAATGCTATTGCAAATATGCATGCTCAAGG
CGATGCAGCAAAGTGTCAAGAAAGAAGATATGTATGCGAGCTTGTGGGACTTGCTGCAGTCGATGCCACTGTGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCC
TTGCTATGCTCGCCTCAAGACCCACGGCAATAAGCCCAAGTGCCCTTAAATTCACACACAGGAATCAGGATCCACTCTTGGCATTTGAGCTTGCCGTCGTGGGTGGTCAT
GTTGGCATAGCAAGGGCAGAGGTCTCGGTTGCCGGAAGTTCCCGGCGGCACGCAGTGGCATCTATTACAGCATGTCTCGCACGCTCTTATGCAAATCTTCGGCCTTGA
Protein sequenceShow/hide protein sequence
MKPLSFLFIFILLLLLLQAFSEASSSFNAIANMHAQGDAAKCQERRYVCELVGLAAVDATVSRPALTATTKLALAMLASRPTAISPSALKFTHRNQDPLLAFELAVVGGH
VGIARAEVSVAGSSRRHAVASITACLARSYANLRP