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Spg039360 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039360
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein 230
Genome locationscaffold10:44469993..44473295
RNA-Seq ExpressionSpg039360
SyntenySpg039360
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459349.1 PREDICTED: transmembrane protein 230 [Cucumis melo]9.4e-5694.83Show/hide
Query:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRN+RYSSLA+DDND+D EGS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022939930.1 transmembrane protein 230-like [Cucurbita moschata]2.7e-5593.97Show/hide
Query:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+TDDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022961740.1 transmembrane protein 230-like [Cucurbita moschata]2.2e-5797.41Show/hide
Query:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLA DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022990725.1 transmembrane protein 230-like [Cucurbita maxima]2.5e-5696.55Show/hide
Query:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR+VRYSSLA DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGY FASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_023521905.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]7.7e-5898.28Show/hide
Query:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLA DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

TrEMBL top hitse value%identityAlignment
A0A1S3C9X7 Transmembrane protein 2304.5e-5694.83Show/hide
Query:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRN+RYSSLA+DDND+D EGS++DPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1FP54 Transmembrane protein 2301.3e-5593.97Show/hide
Query:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+TDDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1HAY7 Transmembrane protein 2301.1e-5797.41Show/hide
Query:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLA DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1JQW3 Transmembrane protein 2301.2e-5696.55Show/hide
Query:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR+VRYSSLA DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGY FASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1K312 Transmembrane protein 2301.3e-5593.97Show/hide
Query:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+TDDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2309.2e-1439.34Show/hide
Query:  NFAFMASRRNVRYSSL-ATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYE
        N A       V+YS L +TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY 
Subjt:  NFAFMASRRNVRYSSL-ATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYE

Query:  TRIAYYAWRGANGYRFASIPDY
         RIAYYA +G  GY +  IPD+
Subjt:  TRIAYYAWRGANGYRFASIPDY

Q5E975 Transmembrane protein 2301.2e-1339.34Show/hide
Query:  NFAFMASRRNVRYSSL-ATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYE
        N A       V+YS L +TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +L G+++ G   +A  +L +G L FLPGFY 
Subjt:  NFAFMASRRNVRYSSL-ATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYE

Query:  TRIAYYAWRGANGYRFASIPDY
         RIAYYA +G  GY +  IPD+
Subjt:  TRIAYYAWRGANGYRFASIPDY

Q5ZLH4 Transmembrane protein 2302.4e-1441.07Show/hide
Query:  VRYSSLA-TDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS LA TDD  +D +  +  P          KIP+K+IALA+ L ++G+ L+ +   +L G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSLA-TDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q8CIB6 Transmembrane protein 2304.1e-1440.16Show/hide
Query:  NFAFMASRRNVRYSSLA-TDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYE
        N A       V+YS LA TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY 
Subjt:  NFAFMASRRNVRYSSLA-TDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYE

Query:  TRIAYYAWRGANGYRFASIPDY
         RIAYYA +G  GY +  IPD+
Subjt:  TRIAYYAWRGANGYRFASIPDY

Q96A57 Transmembrane protein 2309.2e-1440.98Show/hide
Query:  NFAFMASRRNVRYSSL-ATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYE
        N A       V+YS L +TDD  +D +       F  TP    KIP+K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY 
Subjt:  NFAFMASRRNVRYSSL-ATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYE

Query:  TRIAYYAWRGANGYRFASIPDY
         RIAYYA +G  GY +  IPD+
Subjt:  TRIAYYAWRGANGYRFASIPDY

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)1.2e-1143.24Show/hide
Query:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP
        P K I+LA+ LL+ G+L + L +F+    + G++      + LG L F+PGFY TRIAYYA++G  G+ F++IP
Subjt:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)3.1e-4166.12Show/hide
Query:  MASRRNVRYSSLATDDNDLDY-----EGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYET
        MASRR+VRY+ L  D++D  Y     E   +DPRF Y+PKAFD++PWKSIALA+FLL LG LLL LS+F+  GHM G+ SQ Y LL LG LTFLPGFYET
Subjt:  MASRRNVRYSSLATDDNDLDY-----EGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYET

Query:  RIAYYAWRGANGYRFASIPDY
        RIAYY+WRGA GYRFA+IP Y
Subjt:  RIAYYAWRGANGYRFASIPDY

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)2.0e-1143.24Show/hide
Query:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP
        P K IALA+ LL+ G+L +   +F+    + G++      + LG L F+PGFY TRIAYYA++G  G+ F++IP
Subjt:  PWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTTGTGGATTAGGGTTTCTGAAGATTTCACGATCGATTTCCCATCGCCGTCTCTCGCCTCTTCTCTTCCGAGATTTCCTCTTTCAGACTGCATTCTTGAACTT
CGCTTTCATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCCACGGATGATAACGATCTTGATTATGAAGGAAGTCAATATGACCCTCGCTTTTACTATACACCAA
AAGCTTTTGACAAGATCCCGTGGAAATCCATCGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCA
GGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAAACTAGGATTGCATATTATGCATGGAGGGGTGCTAATGGATA
TCGCTTCGCTTCCATTCCCGATTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTTGTGGATTAGGGTTTCTGAAGATTTCACGATCGATTTCCCATCGCCGTCTCTCGCCTCTTCTCTTCCGAGATTTCCTCTTTCAGACTGCATTCTTGAACTT
CGCTTTCATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCCACGGATGATAACGATCTTGATTATGAAGGAAGTCAATATGACCCTCGCTTTTACTATACACCAA
AAGCTTTTGACAAGATCCCGTGGAAATCCATCGCTCTTGCTATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCA
GGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAAACTAGGATTGCATATTATGCATGGAGGGGTGCTAATGGATA
TCGCTTCGCTTCCATTCCCGATTACTAG
Protein sequenceShow/hide protein sequence
MEICGLGFLKISRSISHRRLSPLLFRDFLFQTAFLNFAFMASRRNVRYSSLATDDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMA
GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY