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Spg039399 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039399
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold10:46721615..46725057
RNA-Seq ExpressionSpg039399
SyntenySpg039399
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047188.1 hypothetical protein E6C27_scaffold83G00680 [Cucumis melo var. makuwa]2.0e-0444.78Show/hide
Query:  SSKVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFGRLGWD
        ++K+ SWNTRGL+D SK++ +K+ L+N + ++VLIQE+K  SI+  I+K    IW    S   +GWD
Subjt:  SSKVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFGRLGWD

KAG6638248.1 hypothetical protein CIPAW_10G022700 [Carya illinoinensis]7.4e-0440.54Show/hide
Query:  KVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKT----EEVIWVHVESFGRLG-----WD
        K+ SWN RGL +++KR++++  L+    D+V +QETKL +IDRRIV++      V W ++ S G  G     WD
Subjt:  KVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKT----EEVIWVHVESFGRLG-----WD

RVW23991.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]5.2e-0536.11Show/hide
Query:  RSSKVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFG---RLGWDD-QSYGWESLMLSAKLRNLKSAMKVWFNK
        + +KVRSWN +GL   +KR  +K FL++ + D+V+IQETK    DRR     E +W+   +F    R  W   Q  GWE      +L+ +K+ +K W NK
Subjt:  RSSKVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFG---RLGWDD-QSYGWESLMLSAKLRNLKSAMKVWFNK

Query:  YEIAKNEE
        +   +  E
Subjt:  YEIAKNEE

XP_028096430.1 uncharacterized protein LOC114296321 [Camellia sinensis]8.8e-0531.4Show/hide
Query:  KVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFGRLGWDDQSY-------------------------------
        KV SWN RGL    K  +++ F+++   DMVLIQETK +SID R V++   +W   +  G +  DD+ +                               
Subjt:  KVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFGRLGWDDQSY-------------------------------

Query:  GWESLMLSAKLRNLKSAMKVW
        GW    +  KLR LK A+K+W
Subjt:  GWESLMLSAKLRNLKSAMKVW

XP_038876676.1 uncharacterized protein LOC120069076 [Benincasa hispida]3.3e-0445.33Show/hide
Query:  KVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVK----TEEVIWVHVESFGRLG-----WDD
        K+ +W+TRGL D SKR+ LK+FL+ V+ D+VLIQETK   I+   +K    ++EV    VE+ G+ G     WDD
Subjt:  KVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVK----TEEVIWVHVESFGRLG-----WDD

TrEMBL top hitse value%identityAlignment
A0A2N9HML3 CHZ domain-containing protein8.0e-0434.34Show/hide
Query:  KVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKT----EEVIWVHVESFGRLG-----WD-------DQSYGWESLMLSAKLRNL
        K+ SWN RGL DV KRI++K  L+    D++ +QE K+  I R+I+++      V W+++ S G  G     WD       +++ G+ S  +S K RN+
Subjt:  KVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKT----EEVIWVHVESFGRLG-----WD-------DQSYGWESLMLSAKLRNL

A0A438CLB8 Transposon TX1 uncharacterized 149 kDa protein2.5e-0536.11Show/hide
Query:  RSSKVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFG---RLGWDD-QSYGWESLMLSAKLRNLKSAMKVWFNK
        + +KVRSWN +GL   +KR  +K FL++ + D+V+IQETK    DRR     E +W+   +F    R  W   Q  GWE      +L+ +K+ +K W NK
Subjt:  RSSKVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFG---RLGWDD-QSYGWESLMLSAKLRNLKSAMKVWFNK

Query:  YEIAKNEE
        +   +  E
Subjt:  YEIAKNEE

A0A5A7TWB6 Uncharacterized protein9.5e-0544.78Show/hide
Query:  SSKVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFGRLGWD
        ++K+ SWNTRGL+D SK++ +K+ L+N + ++VLIQE+K  SI+  I+K    IW    S   +GWD
Subjt:  SSKVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFGRLGWD

A5BNY2 Uncharacterized protein6.2e-0433.65Show/hide
Query:  TRVLLRSSKVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVI----WVHVESFGRLG-----WDDQSYGWESLMLSAKLRNL
        TR +  S K+ +WNTRGL   +KR  +K FL++ + D+V+IQETK    DRR V +   +    W  + + G LG     WD +    E +++ +   ++
Subjt:  TRVLLRSSKVRSWNTRGLVDVSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVI----WVHVESFGRLG-----WDDQSYGWESLMLSAKLRNL

Query:  KSAM
        K A+
Subjt:  KSAM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAACGCATCCTCAAGAAGGAAGAATCCATGGATGAAATGAGAAGCAACATGCAAGAATTACACCAAATGATGAAAGTTGACTTCAACAATGGAAACTATGAGAT
ATGGAAAAATGCCTATAAGATCTTGGCCAAAGATGCTGATATTAATGAAACGACATCACACTCTCTTCTCCTATCTACTAGTTTCTCGTCTTCACTTGCCGATGTTTTCT
TACTGGTCTCCGATTATCTTCCTTGGATCCAGTTTTATCTCGTTTTGAGTACTCTTATGGTGTTTTCTTGGAGTTACCCCTCTGCTTGTATTTTCAAACGAAAAGTCATG
GAGAATCAAAAAGTAATGAAAGACGAAGGGTTTGATTCTCAAATACAAAATCCAGATGTCGAATACTATGGAAAAATGCTGGAAATTCCTTCGGTTTCAAGGGACCCTAA
GGAGCCTCTCCATGGAGTGAGGGAGGTTTTTAAGAATGAGGAGGATGTTGCGTTTATTGATGAATCATTAAATGATATTTTAACTCAAGTTTCAAACGCATACAAATCAA
ATGATCTTGAAATCAATAGTTGTAATATCGGGCTAGAAGGTGTGCTTCTCACAAGAGTTCTGCTTCGCTCTTCTAAAGTCCGTTCATGGAACACTAGAGGTTTGGTGGAT
GTCTCCAAAAGGATAAAGCTGAAGAAATTTTTGCAAAATGTAAGTCAAGATATGGTTCTTATTCAAGAGACCAAGTTGACTTCTATTGACAGGAGGATTGTTAAAACTGA
AGAGGTTATTTGGGTGCATGTGGAATCTTTTGGCAGATTGGGGTGGGATGATCAATCGTATGGATGGGAAAGTTTGATGCTTTCTGCTAAGCTTCGAAATTTGAAATCAG
CAATGAAAGTTTGGTTTAACAAATACGAAATAGCAAAGAATGAGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAACGCATCCTCAAGAAGGAAGAATCCATGGATGAAATGAGAAGCAACATGCAAGAATTACACCAAATGATGAAAGTTGACTTCAACAATGGAAACTATGAGAT
ATGGAAAAATGCCTATAAGATCTTGGCCAAAGATGCTGATATTAATGAAACGACATCACACTCTCTTCTCCTATCTACTAGTTTCTCGTCTTCACTTGCCGATGTTTTCT
TACTGGTCTCCGATTATCTTCCTTGGATCCAGTTTTATCTCGTTTTGAGTACTCTTATGGTGTTTTCTTGGAGTTACCCCTCTGCTTGTATTTTCAAACGAAAAGTCATG
GAGAATCAAAAAGTAATGAAAGACGAAGGGTTTGATTCTCAAATACAAAATCCAGATGTCGAATACTATGGAAAAATGCTGGAAATTCCTTCGGTTTCAAGGGACCCTAA
GGAGCCTCTCCATGGAGTGAGGGAGGTTTTTAAGAATGAGGAGGATGTTGCGTTTATTGATGAATCATTAAATGATATTTTAACTCAAGTTTCAAACGCATACAAATCAA
ATGATCTTGAAATCAATAGTTGTAATATCGGGCTAGAAGGTGTGCTTCTCACAAGAGTTCTGCTTCGCTCTTCTAAAGTCCGTTCATGGAACACTAGAGGTTTGGTGGAT
GTCTCCAAAAGGATAAAGCTGAAGAAATTTTTGCAAAATGTAAGTCAAGATATGGTTCTTATTCAAGAGACCAAGTTGACTTCTATTGACAGGAGGATTGTTAAAACTGA
AGAGGTTATTTGGGTGCATGTGGAATCTTTTGGCAGATTGGGGTGGGATGATCAATCGTATGGATGGGAAAGTTTGATGCTTTCTGCTAAGCTTCGAAATTTGAAATCAG
CAATGAAAGTTTGGTTTAACAAATACGAAATAGCAAAGAATGAGGAGTGA
Protein sequenceShow/hide protein sequence
MSQRILKKEESMDEMRSNMQELHQMMKVDFNNGNYEIWKNAYKILAKDADINETTSHSLLLSTSFSSSLADVFLLVSDYLPWIQFYLVLSTLMVFSWSYPSACIFKRKVM
ENQKVMKDEGFDSQIQNPDVEYYGKMLEIPSVSRDPKEPLHGVREVFKNEEDVAFIDESLNDILTQVSNAYKSNDLEINSCNIGLEGVLLTRVLLRSSKVRSWNTRGLVD
VSKRIKLKKFLQNVSQDMVLIQETKLTSIDRRIVKTEEVIWVHVESFGRLGWDDQSYGWESLMLSAKLRNLKSAMKVWFNKYEIAKNEE