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Spg039401 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039401
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDuplicated homeodomain-like superfamily protein
Genome locationscaffold10:46022668..46023042
RNA-Seq ExpressionSpg039401
SyntenySpg039401
Gene Ontology termsGO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR044636 - Transcription factor RADIALIS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER30485.1 duplicated homeodomain-like superfamily protein [Striga asiatica]8.7e-1242.53Show/hide
Query:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTSKNRETPKEKEEHR
        WT  EN AF+ AL  ++EKTPDRWHKV A VP KT+ D+I HY ++  ++ +IE+G V +  Y A ++S     + +     +EEH+
Subjt:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTSKNRETPKEKEEHR

GFP80575.1 transcription factor divaricata [Phtheirospermum japonicum]8.7e-1248.65Show/hide
Query:  REWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRP
        R WT  EN AF+ AL +++E TPDRWHKV A VP KT+ DVI  Y E+  ++ +IEAG VP+  Y   ++   P
Subjt:  REWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRP

KAB5520377.1 hypothetical protein DKX38_024696 [Salix brachista]8.7e-1244.87Show/hide
Query:  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNY
        +S +N   ++ +  +WT  EN AF+ AL +Y++ TPDRWHKV A +P KT+RDVI  Y E+  ++  IEAG +P+  Y
Subjt:  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNY

KAE9605999.1 putative transcription factor MYB/SANT family [Lupinus albus]3.9e-1245.33Show/hide
Query:  EWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTS
        +WT +EN  F+ AL +Y+++TPDRWHK+ A +P KT+ DV+  Y E+  ++ NIEAG VP+  Y++ TN+   T+
Subjt:  EWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTS

XP_031277790.1 transcription factor DIVARICATA-like [Pistacia vera]3.9e-1245.24Show/hide
Query:  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNS
        +ST+N   +  +  +WT  EN  F+ AL +Y++ TPDRWHKV A +P KT+ DVI  Y E+  ++ NIEAG +P+  Y   TNS
Subjt:  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNS

TrEMBL top hitse value%identityAlignment
A0A5A7P647 Duplicated homeodomain-like superfamily protein4.2e-1250.72Show/hide
Query:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNS
        WT  EN AF+ AL ++++ TPDRWHKV A VP KT+ DVI HY E+  ++ +IEAG VP+  Y    +S
Subjt:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNS

A0A5A7PC39 Duplicated homeodomain-like superfamily protein4.2e-1242.53Show/hide
Query:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTSKNRETPKEKEEHR
        WT  EN AF+ AL  ++EKTPDRWHKV A VP KT+ D+I HY ++  ++ +IE+G V +  Y A ++S     + +     +EEH+
Subjt:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTSKNRETPKEKEEHR

A0A5N5JZT6 Uncharacterized protein4.2e-1244.87Show/hide
Query:  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNY
        +S +N   ++ +  +WT  EN AF+ AL +Y++ TPDRWHKV A +P KT+RDVI  Y E+  ++  IEAG +P+  Y
Subjt:  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNY

A0A6A5NSE9 Putative transcription factor MYB/SANT family1.9e-1245.33Show/hide
Query:  EWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTS
        +WT +EN  F+ AL +Y+++TPDRWHK+ A +P KT+ DV+  Y E+  ++ NIEAG VP+  Y++ TN+   T+
Subjt:  EWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTS

B9SHX6 DNA binding protein, putative5.5e-1244.87Show/hide
Query:  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNY
        +S++N   ++ +  +WT  EN  F+ AL +Y++ TPDRWHKV A +P KT+ DVI  Y E+  ++ NIEAG VP+  Y
Subjt:  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNY

SwissProt top hitse value%identityAlignment
Q1A173 Protein RADIALIS-like 66.9e-1245.07Show/hide
Query:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDR
        WTF++N  F+ AL +Y++ TPDRWH V   V  KT+ +V  HY  +  +L NIE G VPL NY+   ++ R
Subjt:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDR

Q58FS3 Transcription factor RADIALIS1.0e-0734.07Show/hide
Query:  REWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTSKNRETPKEKEEHRRV
        R W+  EN AF+ AL +Y++ TPDRW  V   V  +T  +V  HY  +  ++  IE+G VP  NY       R T  N +T +++  + ++
Subjt:  REWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTSKNRETPKEKEEHRRV

Q6NNN0 Protein RADIALIS-like 32.7e-0839.13Show/hide
Query:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNS
        WT  EN  F+ AL  Y++ TPDRWH V   V  K+  +V  HY  +  ++ +IE+G  P  NY +  N+
Subjt:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNS

Q8S9H7 Transcription factor DIVARICATA3.8e-1033.04Show/hide
Query:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEA--------------------------KTNSDRPTS
        WT  EN AF+ AL +++E TP+RW +V   VP KT+ DV+  Y E+  ++ +IEAG VP+  Y                            K++S RP+ 
Subjt:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEA--------------------------KTNSDRPTS

Query:  KNRE--TPKEKEEHR
        + R+   P  +EEH+
Subjt:  KNRE--TPKEKEEHR

Q9SIJ5 Protein RADIALIS-like 26.0e-0837.97Show/hide
Query:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKT-NSDRPTSKNRE
        WT  +N AF+ AL +Y++ TPDRWH V   V  KT  +    Y  +  ++ +IE G VP  +Y+  T NS+R   ++ E
Subjt:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKT-NSDRPTSKNRE

Arabidopsis top hitse value%identityAlignment
AT1G75250.1 RAD-like 64.9e-1345.07Show/hide
Query:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDR
        WTF++N  F+ AL +Y++ TPDRWH V   V  KT+ +V  HY  +  +L NIE G VPL NY+   ++ R
Subjt:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDR

AT1G75250.2 RAD-like 64.9e-1345.07Show/hide
Query:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDR
        WTF++N  F+ AL +Y++ TPDRWH V   V  KT+ +V  HY  +  +L NIE G VPL NY+   ++ R
Subjt:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDR

AT2G38090.1 Duplicated homeodomain-like superfamily protein2.9e-1341.03Show/hide
Query:  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNY
        + TSN    + +  +WT  EN  F+ AL  Y++ TPDRW +V A +P KT+ DVI  Y E+  ++ +IEAG +P+  Y
Subjt:  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNY

AT5G05790.1 Duplicated homeodomain-like superfamily protein9.9e-1445.07Show/hide
Query:  QRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKT
        Q   WT  EN  F+ AL +Y + TPDRW KV A +P KT+ DV+  Y+++  +L++IEAG VP+  Y + T
Subjt:  QRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKT

AT5G58900.1 Homeodomain-like transcriptional regulator7.6e-1447.62Show/hide
Query:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNY
        WT  EN AF+ AL +Y++ TPDRW KV A +P KT+ DVI  Y ++  ++ +IEAG +P+  Y
Subjt:  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCTCGAATCGGTGTCCGGACAAAGAGCAGAGGAGAGAGTGGACGTTTACTGAGAATGTAGCATTTGACACGGCTCTTAGAATGTACAATGAGAAAACTCCGGA
CCGATGGCACAAGGTGGTGGCTTGTGTTCCATGGAAGACTCTGAGGGATGTGATCGATCATTATGCCGAAATACATGGAGAGTTATATAACATTGAAGCCGGTACAGTTC
CACTTGTAAATTATGAGGCTAAGACCAATTCTGATCGGCCGACTTCCAAGAACCGGGAAACGCCTAAAGAAAAGGAAGAACACAGGCGAGTTTCCTTCACTAAACTATAT
GGGGATGCCTTCAAAGTTGAAACAACTCCACGTTACGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACCTCGAATCGGTGTCCGGACAAAGAGCAGAGGAGAGAGTGGACGTTTACTGAGAATGTAGCATTTGACACGGCTCTTAGAATGTACAATGAGAAAACTCCGGA
CCGATGGCACAAGGTGGTGGCTTGTGTTCCATGGAAGACTCTGAGGGATGTGATCGATCATTATGCCGAAATACATGGAGAGTTATATAACATTGAAGCCGGTACAGTTC
CACTTGTAAATTATGAGGCTAAGACCAATTCTGATCGGCCGACTTCCAAGAACCGGGAAACGCCTAAAGAAAAGGAAGAACACAGGCGAGTTTCCTTCACTAAACTATAT
GGGGATGCCTTCAAAGTTGAAACAACTCCACGTTACGATTTTTGA
Protein sequenceShow/hide protein sequence
MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTSKNRETPKEKEEHRRVSFTKLY
GDAFKVETTPRYDF