; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039451 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039451
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-H2 finger protein ATL74-like
Genome locationscaffold10:41327838..41334104
RNA-Seq ExpressionSpg039451
SyntenySpg039451
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602265.1 RING-H2 finger protein ATL7, partial [Cucurbita argyrosperma subsp. sororia]3.5e-6579.08Show/hide
Query:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS
        + +S LERG HG+EPFVVANFPTKK             CTVCLADYH EDLLRILPYCGHFFHVTCIDIWLH+HSTCPVCR SLREVPDKKR +QPLFSS
Subjt:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS

Query:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE
        AIRSHYNLNSDVCA+PC GFPL DHEN+GLEPIQEN+ N AADP ENASSFTE
Subjt:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE

KAG7032948.1 RING-H2 finger protein ATL7 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-6579.08Show/hide
Query:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS
        + +S LERG HG+EPFVVANFPTKK             CTVCLADYH EDLLRILPYCGHFFHVTCIDIWLH+HSTCPVCR SLREVPDKKR +QPLFSS
Subjt:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS

Query:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE
        AIRSHYNLNSDVCA+PC GFPL DHEN+GLEPIQEN+ N AADP ENASSFTE
Subjt:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE

XP_022960827.1 RING-H2 finger protein ATL74-like [Cucurbita moschata]2.3e-6478.43Show/hide
Query:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS
        + +S LERG HG+EPFVVANFPTKK             CTVCLADY+ EDLLRILPYCGH FHVTCIDIWLH+HSTCPVCR SLREVPDKKR +QPLFSS
Subjt:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS

Query:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE
        AIRSHYNLNSDVCA+PC GFPL DHEN+GLEPIQEN+ NGAADP ENASSFTE
Subjt:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE

XP_022990455.1 RING-H2 finger protein ATL74-like [Cucurbita maxima]3.5e-6579.08Show/hide
Query:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS
        + +S LERG HG+EPFVVANFPTKK             CTVCLADYH EDLLRILPYCGH FHVTCIDIWLH+HSTCPVCR SLREVPDKKR +QPLFSS
Subjt:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS

Query:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE
        AIRSHYNLNSDVCA+PC GFPL DHEN+GLEPIQEN+ NGAADP ENASSFTE
Subjt:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE

XP_023524777.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]3.5e-6579.08Show/hide
Query:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS
        + +S LERG HG+EPFVVANFPTKK             CTVCLADYH EDLLRILPYCGH FHVTCIDIWLH+HSTCPVCR SLREVPDKKR +QPLFSS
Subjt:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS

Query:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE
        AIRSHYNLNSDVCA+PC GFPL DHEN+GLEPIQEN+ NGAADP ENASSFTE
Subjt:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE

TrEMBL top hitse value%identityAlignment
A0A6J1BZK6 RING-H2 finger protein ATL38-like3.5e-5875.5Show/hide
Query:  LERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSSAIRSH
        LERGLHGLE F VANFPTKK             CTVCLADYH ED+LRILPYCGH FHV CIDIWLHQHSTCPVCR+SLRE PDKKR MQPLFSSAIRSH
Subjt:  LERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSSAIRSH

Query:  YNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTN---GAADPTENASSFTE
        Y LNS+VC HPC GFPLRD ENSGLEPIQEN  +     AD TENASSF E
Subjt:  YNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTN---GAADPTENASSFTE

A0A6J1FMG8 putative RING-H2 finger protein ATL711.2e-5571.97Show/hide
Query:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS
        + +S LERGLHGLEP VVANFPTKK             CTVCLADYH EDLLRILPYCGH FHV CIDIWLHQ+ TCPVCRISLR+VPDKKR MQPLFSS
Subjt:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS

Query:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGL-EPIQEN-----RTNGAADPTENASSF
        AIRSHYNLNSD  AHPC  FPL+D ENSGL +PIQ+      RTNGAA+  EN SSF
Subjt:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGL-EPIQEN-----RTNGAADPTENASSF

A0A6J1H8I0 RING-H2 finger protein ATL74-like1.1e-6478.43Show/hide
Query:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS
        + +S LERG HG+EPFVVANFPTKK             CTVCLADY+ EDLLRILPYCGH FHVTCIDIWLH+HSTCPVCR SLREVPDKKR +QPLFSS
Subjt:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS

Query:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE
        AIRSHYNLNSDVCA+PC GFPL DHEN+GLEPIQEN+ NGAADP ENASSFTE
Subjt:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE

A0A6J1JQ55 RING-H2 finger protein ATL74-like1.7e-6579.08Show/hide
Query:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS
        + +S LERG HG+EPFVVANFPTKK             CTVCLADYH EDLLRILPYCGH FHVTCIDIWLH+HSTCPVCR SLREVPDKKR +QPLFSS
Subjt:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS

Query:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE
        AIRSHYNLNSDVCA+PC GFPL DHEN+GLEPIQEN+ NGAADP ENASSFTE
Subjt:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTE

A0A6J1K062 putative RING-H2 finger protein ATL714.2e-5673.72Show/hide
Query:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS
        + +S LERGLHGLEP VVANFPTKK             CTVCLADYH EDLLRILP CGH FHV CIDIWLHQ+ TCPVCRISLR+VPDKKR MQPLFSS
Subjt:  AQVSTLERGLHGLEPFVVANFPTKK-------------CTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSS

Query:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGL-EPIQEN----RTNGAADPTENASSF
        AIRSHYNLNSD  AHPC  FPLRD ENSGL +PIQEN    RTNGAA+  EN SSF
Subjt:  AIRSHYNLNSDVCAHPCRGFPLRDHENSGL-EPIQEN----RTNGAADPTENASSF

SwissProt top hitse value%identityAlignment
Q8RXX9 E3 ubiquitin-protein ligase ATL63.3e-1336Show/hide
Query:  GAAQVSTLERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQP
        GA   +T+     GL+  VV  FPT                +C +CL ++  ++ LR+LP C H FH  CID WL  H TCPVCR +L E   +   ++P
Subjt:  GAAQVSTLERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQP

Q9C7I1 RING-H2 finger protein ATL341.2e-1530.59Show/hide
Query:  YNNFGVNGIGNFPDEVGAAQVSTLERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVC
        Y N   +G  +  +E G  +V+   R   GL   V+ +FP+                +C +CL ++  E+ LR++P C H FH +CID+WL   STCPVC
Subjt:  YNNFGVNGIGNFPDEVGAAQVSTLERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVC

Query:  RISLREVPDKKRMMQPLFSSAIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASS
        R SL   P K    Q      IR H N + D+     R   L   +   L+ +  +   GA  P  + S+
Subjt:  RISLREVPDKKRMMQPLFSSAIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASS

Q9M0R5 Putative RING-H2 finger protein ATL366.6e-1430.54Show/hide
Query:  FPDEVGAAQVSTL-ERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDK
        + +E+GAA    L  R   GLE  V+ +FPT                +C +CL+++  ++ LR +P C H FH  CID+WL   STCPVCR +L   P +
Subjt:  FPDEVGAAQVSTL-ERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDK

Query:  KRMMQPLFSSAIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTEESHS
                     S+  LN DV     +  P  +   +G      +R+ G       A  F   SHS
Subjt:  KRMMQPLFSSAIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTEESHS

Q9SN27 E3 ubiquitin-protein ligase ATL599.5e-1354.9Show/hide
Query:  KCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVP
        +C+VCL DY  E+ L+ +P CGH FH+ CID+WL  H+TCP+CR+SL   P
Subjt:  KCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVP

Q9SN28 RING-H2 finger protein ATL73.3e-1350Show/hide
Query:  EPFVVANFPTKKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVP
        E F+V +    +C+VCL DY  E+ L+ +P CGH FH+ CID+WL  H+TCP+CR+SL   P
Subjt:  EPFVVANFPTKKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVP

Arabidopsis top hitse value%identityAlignment
AT1G35330.1 RING/U-box superfamily protein8.5e-1730.59Show/hide
Query:  YNNFGVNGIGNFPDEVGAAQVSTLERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVC
        Y N   +G  +  +E G  +V+   R   GL   V+ +FP+                +C +CL ++  E+ LR++P C H FH +CID+WL   STCPVC
Subjt:  YNNFGVNGIGNFPDEVGAAQVSTLERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVC

Query:  RISLREVPDKKRMMQPLFSSAIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASS
        R SL   P K    Q      IR H N + D+     R   L   +   L+ +  +   GA  P  + S+
Subjt:  RISLREVPDKKRMMQPLFSSAIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASS

AT3G05200.1 RING/U-box superfamily protein2.3e-1436Show/hide
Query:  GAAQVSTLERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQP
        GA   +T+     GL+  VV  FPT                +C +CL ++  ++ LR+LP C H FH  CID WL  H TCPVCR +L E   +   ++P
Subjt:  GAAQVSTLERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQP

AT4G09120.1 RING/U-box superfamily protein4.7e-1530.54Show/hide
Query:  FPDEVGAAQVSTL-ERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDK
        + +E+GAA    L  R   GLE  V+ +FPT                +C +CL+++  ++ LR +P C H FH  CID+WL   STCPVCR +L   P +
Subjt:  FPDEVGAAQVSTL-ERGLHGLEPFVVANFPT---------------KKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDK

Query:  KRMMQPLFSSAIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTEESHS
                     S+  LN DV     +  P  +   +G      +R+ G       A  F   SHS
Subjt:  KRMMQPLFSSAIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTEESHS

AT4G10150.1 RING/U-box superfamily protein2.3e-1450Show/hide
Query:  EPFVVANFPTKKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVP
        E F+V +    +C+VCL DY  E+ L+ +P CGH FH+ CID+WL  H+TCP+CR+SL   P
Subjt:  EPFVVANFPTKKCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVP

AT4G10160.1 RING/U-box superfamily protein6.8e-1454.9Show/hide
Query:  KCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVP
        +C+VCL DY  E+ L+ +P CGH FH+ CID+WL  H+TCP+CR+SL   P
Subjt:  KCTVCLADYHGEDLLRILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGCGTGACACCAGCATGTGACCTTCACGTGACACCAGCAGTGAATTTGTATGAGAGGGGGGAAGACATGGCCTGGTCCGTTTTCTGGTCCTGTTTTCGGGCTCG
TGCCACTTACGTTTGCTCCTTGAATTCTGAAGTGGTCAGAATTATCTATAACAATTTCGGCGTGAATGGGATTGGAAATTTTCCTGACGAGGTTGGAGCTGCTCAAGTTA
GCACGCTGGAACGGGGATTACACGGTCTAGAGCCTTTTGTTGTAGCTAACTTTCCAACTAAGAAATGCACAGTTTGCCTGGCAGATTATCATGGTGAAGACTTATTGCGC
ATTCTCCCCTACTGTGGACACTTCTTCCATGTGACCTGCATAGACATATGGCTGCATCAGCACTCGACGTGCCCAGTTTGTCGTATATCGTTACGTGAAGTCCCAGACAA
GAAACGAATGATGCAACCCTTGTTTAGTTCAGCAATCCGCTCTCATTACAACCTCAACTCAGATGTCTGTGCTCATCCCTGCCGCGGGTTCCCATTAAGAGACCATGAAA
ACAGTGGGTTGGAACCAATCCAAGAGAATCGGACCAATGGAGCAGCAGATCCGACAGAGAACGCTTCCTCGTTTACCGAAGAATCTCATTCTGCAGCTGCTGTTGTTTTG
TTTTGGAGTTTTGATGTACTTTCCTGTGGGCTGTGGACACTGCAAGAATTGACCCAAATTCTAAATCTCTCCAGTTTCTGC
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGCGTGACACCAGCATGTGACCTTCACGTGACACCAGCAGTGAATTTGTATGAGAGGGGGGAAGACATGGCCTGGTCCGTTTTCTGGTCCTGTTTTCGGGCTCG
TGCCACTTACGTTTGCTCCTTGAATTCTGAAGTGGTCAGAATTATCTATAACAATTTCGGCGTGAATGGGATTGGAAATTTTCCTGACGAGGTTGGAGCTGCTCAAGTTA
GCACGCTGGAACGGGGATTACACGGTCTAGAGCCTTTTGTTGTAGCTAACTTTCCAACTAAGAAATGCACAGTTTGCCTGGCAGATTATCATGGTGAAGACTTATTGCGC
ATTCTCCCCTACTGTGGACACTTCTTCCATGTGACCTGCATAGACATATGGCTGCATCAGCACTCGACGTGCCCAGTTTGTCGTATATCGTTACGTGAAGTCCCAGACAA
GAAACGAATGATGCAACCCTTGTTTAGTTCAGCAATCCGCTCTCATTACAACCTCAACTCAGATGTCTGTGCTCATCCCTGCCGCGGGTTCCCATTAAGAGACCATGAAA
ACAGTGGGTTGGAACCAATCCAAGAGAATCGGACCAATGGAGCAGCAGATCCGACAGAGAACGCTTCCTCGTTTACCGAAGAATCTCATTCTGCAGCTGCTGTTGTTTTG
TTTTGGAGTTTTGATGTACTTTCCTGTGGGCTGTGGACACTGCAAGAATTGACCCAAATTCTAAATCTCTCCAGTTTCTGC
Protein sequenceShow/hide protein sequence
MSCVTPACDLHVTPAVNLYERGEDMAWSVFWSCFRARATYVCSLNSEVVRIIYNNFGVNGIGNFPDEVGAAQVSTLERGLHGLEPFVVANFPTKKCTVCLADYHGEDLLR
ILPYCGHFFHVTCIDIWLHQHSTCPVCRISLREVPDKKRMMQPLFSSAIRSHYNLNSDVCAHPCRGFPLRDHENSGLEPIQENRTNGAADPTENASSFTEESHSAAAVVL
FWSFDVLSCGLWTLQELTQILNLSSFC