; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039528 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039528
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold10:43302569..43303066
RNA-Seq ExpressionSpg039528
SyntenySpg039528
Gene Ontology termsGO:0010190 - cytochrome b6f complex assembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51853.2 hypothetical protein Csa_008870 [Cucumis sativus]6.9e-7384.85Show/hide
Query:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE
        M+E+PS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVA+CCCPCSVVSFLALALVK+PWMVGRRCLQ+ARKKRKKRKL+ R+GECDGA AA   E
Subjt:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE

Query:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
        TGG    E+GLPE+ PGSGE++E  GNFSARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

XP_008458773.1 PREDICTED: uncharacterized protein LOC103498078 [Cucumis melo]2.1e-7486.67Show/hide
Query:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE
        M+E+PSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVA+CCCPCSVVSFLALALVK+PWMVGRRCLQ+ARKKRKKRKL+RR+GECDGA AA   E
Subjt:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE

Query:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
        TGG    E+GLPEI PGSGE++E  GNFSARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

XP_011655414.1 uncharacterized protein LOC105435525 [Cucumis sativus]6.9e-7384.85Show/hide
Query:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE
        M+E+PS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVA+CCCPCSVVSFLALALVK+PWMVGRRCLQ+ARKKRKKRKL+ R+GECDGA AA   E
Subjt:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE

Query:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
        TGG    E+GLPE+ PGSGE++E  GNFSARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

XP_022989907.1 uncharacterized protein LOC111486958 [Cucurbita maxima]3.9e-6880.46Show/hide
Query:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE
        MEE+PS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVA+CCCPCSVVSFLALALVK+PWM+GRRCLQRA   RKKRKLIRRK ECDGAAA  A+E
Subjt:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE

Query:  TGGVPAAEEGLPEILPGS---------GEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
        TG  PA EEGLPEI+PGS          E+EEG+GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGN+N WPNSN
Subjt:  TGGVPAAEEGLPEILPGS---------GEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

XP_038891069.1 uncharacterized protein LOC120080480 [Benincasa hispida]3.0e-7688.48Show/hide
Query:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE
        M+E+PSR TRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVA+CCCPCSVVSFLALAL+K+PWMVGRRCLQRARKKRKKRKLIRR+GECDGA AA   E
Subjt:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE

Query:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
        TGG  A+EEGLPEI PGSGE+EE +GNFSARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

TrEMBL top hitse value%identityAlignment
A0A0A0KR58 Uncharacterized protein3.3e-7384.85Show/hide
Query:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE
        M+E+PS+ATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVA+CCCPCSVVSFLALALVK+PWMVGRRCLQ+ARKKRKKRKL+ R+GECDGA AA   E
Subjt:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE

Query:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
        TGG    E+GLPE+ PGSGE++E  GNFSARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

A0A1S3C8M3 uncharacterized protein LOC1034980781.0e-7486.67Show/hide
Query:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE
        M+E+PSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVA+CCCPCSVVSFLALALVK+PWMVGRRCLQ+ARKKRKKRKL+RR+GECDGA AA   E
Subjt:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE

Query:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
        TGG    E+GLPEI PGSGE++E  GNFSARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

A0A5A7T2E5 Uncharacterized protein1.0e-7486.67Show/hide
Query:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE
        M+E+PSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVA+CCCPCSVVSFLALALVK+PWMVGRRCLQ+ARKKRKKRKL+RR+GECDGA AA   E
Subjt:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE

Query:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
        TGG    E+GLPEI PGSGE++E  GNFSARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  TGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

A0A6J1HEE2 uncharacterized protein LOC1114632062.1e-6781.66Show/hide
Query:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE
        MEE+PS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVA+CCCPCSVVSFLALALVK+PWM+GRRCLQRA   RKKRKLIRRK ECDGAAAA  T 
Subjt:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE

Query:  TGGVPAAEEGLPEILPGS----GEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
         G   A EEGLPEI+PGS     E+EEG+GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGN+N WPNSN
Subjt:  TGGVPAAEEGLPEILPGS----GEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

A0A6J1JH40 uncharacterized protein LOC1114869581.9e-6880.46Show/hide
Query:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE
        MEE+PS  TRRRRF VDDG DLIDCSGKHCRSCTAGLVADCVA+CCCPCSVVSFLALALVK+PWM+GRRCLQRA   RKKRKLIRRK ECDGAAA  A+E
Subjt:  MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATE

Query:  TGGVPAAEEGLPEILPGS---------GEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
        TG  PA EEGLPEI+PGS          E+EEG+GNFSARFEAERIWLQLYQ+GQLGFGRVSFTGN+N WPNSN
Subjt:  TGGVPAAEEGLPEILPGS---------GEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01516.1 unknown protein1.5e-2543.95Show/hide
Query:  CSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRK-----------------GECDGAAAA--------VAT
        CSGK CRS  A  +ADCVA+CCCPC+VV+   LA VKVPWM+GR+C+ R    +K+ K I R+                 G C G               
Subjt:  CSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRK-----------------GECDGAAAA--------VAT

Query:  ETGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTG
        E  G    EE     L      EE     SAR EAER+WL+LYQ+G LGFGRVSFTG
Subjt:  ETGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTG

AT3G11690.1 unknown protein1.1e-0434.18Show/hide
Query:  NPSRATRRR---RFAVDDGADLIDCSGKHCRSCTAGLVADCVAI-CCCPCSVVSFLALALVKVPWMVGRRCLQRARKKR
        +PSR+ RR+   + ++   +    C G        G  A C A+ CCCPC +V+ L LA+ KVP  + RR ++  R+K+
Subjt:  NPSRATRRR---RFAVDDGADLIDCSGKHCRSCTAGLVADCVAI-CCCPCSVVSFLALALVKVPWMVGRRCLQRARKKR

AT5G06380.1 unknown protein7.2e-0442.11Show/hide
Query:  GKHCRSCTAGLVADCVAIC-CCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRK
        G     C  G  A C A+C C PCSVV+ + LA+ K+P  + RR ++R R+KR  +K
Subjt:  GKHCRSCTAGLVADCVAIC-CCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRK

AT5G14690.1 unknown protein7.2e-2837.96Show/hide
Query:  MEENPSRATRR-------RRFAVDD-----------GADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRK
        MEENP R +RR       +  AVD+             D + CS K CRS  A  +ADCVA+CCCPC++++ L L LVKVPWM+GRRCL    + +KKR+
Subjt:  MEENPSRATRR-------RRFAVDD-----------GADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRK

Query:  LIRRK---------------------------GE---CDGAAAA------------VATETGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQ
        +I R+                           GE   C G                V    G +   EE         GED +     SAR EAER+WL+
Subjt:  LIRRK---------------------------GE---CDGAAAA------------VATETGGVPAAEEGLPEILPGSGEDEEGMGNFSARFEAERIWLQ

Query:  LYQVGQLGFGRVSFTG
        LYQ+G LGFGRVSFTG
Subjt:  LYQVGQLGFGRVSFTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAACCCATCTCGAGCAACACGCCGGCGGAGGTTCGCCGTGGATGACGGCGCCGATCTTATAGACTGCTCCGGCAAGCATTGCCGGTCCTGCACCGCCGGCCT
GGTGGCCGATTGCGTCGCCATCTGCTGCTGCCCGTGTTCGGTAGTCAGCTTCTTGGCTCTGGCCCTCGTCAAAGTGCCCTGGATGGTCGGCCGGCGGTGTCTGCAGCGGG
CGAGAAAGAAGAGGAAGAAGAGGAAATTGATTCGCCGGAAAGGGGAATGCGACGGCGCAGCGGCGGCGGTAGCGACGGAGACTGGTGGGGTTCCGGCGGCAGAGGAGGGG
TTGCCGGAGATTCTGCCGGGGTCCGGCGAGGATGAAGAAGGGATGGGGAATTTCAGTGCGAGGTTTGAAGCAGAGAGAATTTGGTTGCAGTTGTATCAGGTGGGTCAGTT
GGGTTTTGGAAGAGTTTCTTTCACCGGGAATACAAACCTTTGGCCCAACTCCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAAACCCATCTCGAGCAACACGCCGGCGGAGGTTCGCCGTGGATGACGGCGCCGATCTTATAGACTGCTCCGGCAAGCATTGCCGGTCCTGCACCGCCGGCCT
GGTGGCCGATTGCGTCGCCATCTGCTGCTGCCCGTGTTCGGTAGTCAGCTTCTTGGCTCTGGCCCTCGTCAAAGTGCCCTGGATGGTCGGCCGGCGGTGTCTGCAGCGGG
CGAGAAAGAAGAGGAAGAAGAGGAAATTGATTCGCCGGAAAGGGGAATGCGACGGCGCAGCGGCGGCGGTAGCGACGGAGACTGGTGGGGTTCCGGCGGCAGAGGAGGGG
TTGCCGGAGATTCTGCCGGGGTCCGGCGAGGATGAAGAAGGGATGGGGAATTTCAGTGCGAGGTTTGAAGCAGAGAGAATTTGGTTGCAGTTGTATCAGGTGGGTCAGTT
GGGTTTTGGAAGAGTTTCTTTCACCGGGAATACAAACCTTTGGCCCAACTCCAATTAG
Protein sequenceShow/hide protein sequence
MEENPSRATRRRRFAVDDGADLIDCSGKHCRSCTAGLVADCVAICCCPCSVVSFLALALVKVPWMVGRRCLQRARKKRKKRKLIRRKGECDGAAAAVATETGGVPAAEEG
LPEILPGSGEDEEGMGNFSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN