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Spg039530 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039530
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase ATL4-like
Genome locationscaffold10:43438627..43439073
RNA-Seq ExpressionSpg039530
SyntenySpg039530
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8530253.1 hypothetical protein F0562_004962 [Nyssa sinensis]2.1e-3356.25Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI
        MA+V+S+IL+F+ I +LV IHVCIVGRA   G F++      R    + G  S+ + DL+KLPCF++       KGSSPVDCAVCL  F++GDKCRLLP+
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHANCVDQWLLLTPICPICRTS--TLQSLESCGGEGNDVS
        CKHSFHA CVD WLL TPICPICRTS  T +   S GGE +  S
Subjt:  CKHSFHANCVDQWLLLTPICPICRTS--TLQSLESCGGEGNDVS

KAE8021557.1 hypothetical protein FH972_007437 [Carpinus fangiana]1.3e-3359.57Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI
        MA+++SV L+F GI +L+ IHVCIVGRA R G F N T      RG + G  S+ + DLDKLPC++Y     E + SSPVDCAVCL  F+MGDKCRLLP 
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHANCVDQWLLLTPICPICRTSTLQSLE--SCGGEGN
        CKHSFHA CVD WLL TPICPICRTS  +S +  S  GEG+
Subjt:  CKHSFHANCVDQWLLLTPICPICRTSTLQSLE--SCGGEGN

KAG6578641.1 putative RING-H2 finger protein ATL50, partial [Cucurbita argyrosperma subsp. sororia]5.1e-4373.88Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDAS--LRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLL
        M ++VS+ILI LGIAILV I+V IVGRALR G FENETTT  R   NNNG+A+  +R+ DL+KLPCF+Y MA+EEP G SPVDCAVCLGKF+MG+KCRLL
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDAS--LRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLL

Query:  PICKHSFHANCVDQWLLLTPICPICRTSTLQSLE
        PICKHSFHA CVD+WLLLTP CPICRTSTL+SL+
Subjt:  PICKHSFHANCVDQWLLLTPICPICRTSTLQSLE

XP_022134384.1 E3 ubiquitin-protein ligase ATL4-like [Momordica charantia]9.3e-4569.13Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI
        MAV+VSV LI + I ILV IHVCIV RALR G FENE T       +NNGDAS+ + DL+KLPCFE+ MA+EE  G SPVDCAVCLGKFEMGDKCR+LP+
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHANCVDQWLLLTPICPICRTSTLQSLESCGG-EGNDVSTVPPSN
        CKHSFHA CVD+WLL+TPICPICRT+TL+SL+ CGG EGN V   P S+
Subjt:  CKHSFHANCVDQWLLLTPICPICRTSTLQSLESCGG-EGNDVSTVPPSN

XP_023551528.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]6.7e-4371.22Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDAS--LRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLL
        M ++VS+ILI LGIAILV I+V IVGRALR G FENE TT  R   NNNG+A+  +R+ DL+KLPCF+Y MA+EEP G SPVDCAVCLGKF+MG+KCRLL
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDAS--LRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLL

Query:  PICKHSFHANCVDQWLLLTPICPICRTSTLQSLESCGGE
        PICKHSFHA CVD+WLLLTP CPICRTSTL SL+   G+
Subjt:  PICKHSFHANCVDQWLLLTPICPICRTSTLQSLESCGGE

TrEMBL top hitse value%identityAlignment
A0A2N9ED16 RING-type domain-containing protein9.4e-3564Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI
        MA+++SVIL+F G+ +LV IHVCIVGR+ R G   N T    RG   + G+ASL K DLDKLPC++Y   + + + SSPVDCAVCL  F+MGDKCRLLPI
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHANCVDQWLLLTPICPICRT
        CKHSFHA CVD+WLL TPICPICRT
Subjt:  CKHSFHANCVDQWLLLTPICPICRT

A0A5B6YID6 Putative RING-H2 finger protein ATL56-like6.1e-3458.04Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI
        MA+V+SVIL+F+GI +LV IHVC+VGRA R G F N       G     G  S+ + DL+KLPCF++       KGSSPVDCAVCL  F++GDKCRLLP+
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHANCVDQWLLLTPICPICRTSTLQSLESC-GGEGNDVS
        CKHSFHA CVD WLL TPICPICRTS     ++C GGE +  S
Subjt:  CKHSFHANCVDQWLLLTPICPICRTSTLQSLESC-GGEGNDVS

A0A5J5AGW7 Uncharacterized protein1.0e-3356.25Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI
        MA+V+S+IL+F+ I +LV IHVCIVGRA   G F++      R    + G  S+ + DL+KLPCF++       KGSSPVDCAVCL  F++GDKCRLLP+
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHANCVDQWLLLTPICPICRTS--TLQSLESCGGEGNDVS
        CKHSFHA CVD WLL TPICPICRTS  T +   S GGE +  S
Subjt:  CKHSFHANCVDQWLLLTPICPICRTS--TLQSLESCGGEGNDVS

A0A5N6QVF9 RING-type domain-containing protein6.1e-3459.57Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI
        MA+++SV L+F GI +L+ IHVCIVGRA R G F N T      RG + G  S+ + DLDKLPC++Y     E + SSPVDCAVCL  F+MGDKCRLLP 
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHANCVDQWLLLTPICPICRTSTLQSLE--SCGGEGN
        CKHSFHA CVD WLL TPICPICRTS  +S +  S  GEG+
Subjt:  CKHSFHANCVDQWLLLTPICPICRTSTLQSLE--SCGGEGN

A0A6J1BYM3 E3 ubiquitin-protein ligase ATL4-like4.5e-4569.13Show/hide
Query:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI
        MAV+VSV LI + I ILV IHVCIV RALR G FENE T       +NNGDAS+ + DL+KLPCFE+ MA+EE  G SPVDCAVCLGKFEMGDKCR+LP+
Subjt:  MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPI

Query:  CKHSFHANCVDQWLLLTPICPICRTSTLQSLESCGG-EGNDVSTVPPSN
        CKHSFHA CVD+WLL+TPICPICRT+TL+SL+ CGG EGN V   P S+
Subjt:  CKHSFHANCVDQWLLLTPICPICRTSTLQSLESCGG-EGNDVSTVPPSN

SwissProt top hitse value%identityAlignment
Q7X843 RING-H2 finger protein ATL482.3e-1446.75Show/hide
Query:  DASLRKHDLDKLPCFEY-NMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPICKHSFHANCVDQWLLLTPICPICRTS
        D+ L +  +D LP F Y N+ +       P DCAVCL +F   DK RLLP+C H+FH +C+D WLL    CP+CR S
Subjt:  DASLRKHDLDKLPCFEY-NMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPICKHSFHANCVDQWLLLTPICPICRTS

Q8W571 RING-H2 finger protein ATL329.7e-1333.1Show/hide
Query:  VSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLD-----KLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP
        V V L FL   + V+I  C            +   ++TR   N   D S R+  LD       P F Y+   E   GS  ++CA+CL + E  +  RLLP
Subjt:  VSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLD-----KLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP

Query:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLESCGGEGNDV
        IC H FH +C+D WL     CP+CR++        G E + V
Subjt:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLESCGGEGNDV

Q940Q4 RING-H2 finger protein ATL137.5e-1335.07Show/hide
Query:  VVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGN---NNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP
        +++S+I    G+  L+   +       R   F+N   T  +G+     +  D+ + +  +D LP F Y   +     + P DCAVCL +FE  DK RLLP
Subjt:  VVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGN---NNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP

Query:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLES
         C H+FH +C+D WLL    CP+CR+S L  L S
Subjt:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLES

Q9LY41 E3 ubiquitin-protein ligase ATL41.6e-1533.33Show/hide
Query:  VSVILIFLGIAILVFIHVCIVGRALR------------SGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMG
        V VI++ L + +L+ + +C + R L             S      T+ + R  G+     + R   LD LP F+++         +  DCAVCL KFE  
Subjt:  VSVILIFLGIAILVFIHVCIVGRALR------------SGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMG

Query:  DKCRLLPICKHSFHANCVDQWLLLTPICPICRTSTLQS
        D+ RLLP+C H+FHA+C+D WL+    CP+CR+    S
Subjt:  DKCRLLPICKHSFHANCVDQWLLLTPICPICRTSTLQS

Q9ZV53 Putative RING-H2 finger protein ATL494.4e-1335.07Show/hide
Query:  VVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGN---NNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP
        +++S+I    G+  ++   +    R  R   F+N   T  +G+     N  D+ + +  +D LP F Y   V      SP DC VCL +FE  DK RLLP
Subjt:  VVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGN---NNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP

Query:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLES
         C H+FH  C+D WLL    CP+CR++ L    S
Subjt:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLES

Arabidopsis top hitse value%identityAlignment
AT2G18650.1 RING/U-box superfamily protein3.1e-1435.07Show/hide
Query:  VVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGN---NNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP
        +++S+I    G+  ++   +    R  R   F+N   T  +G+     N  D+ + +  +D LP F Y   V      SP DC VCL +FE  DK RLLP
Subjt:  VVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGN---NNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP

Query:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLES
         C H+FH  C+D WLL    CP+CR++ L    S
Subjt:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLES

AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein1.6e-1546.75Show/hide
Query:  DASLRKHDLDKLPCFEY-NMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPICKHSFHANCVDQWLLLTPICPICRTS
        D+ L +  +D LP F Y N+ +       P DCAVCL +F   DK RLLP+C H+FH +C+D WLL    CP+CR S
Subjt:  DASLRKHDLDKLPCFEY-NMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPICKHSFHANCVDQWLLLTPICPICRTS

AT3G60220.1 TOXICOS EN LEVADURA 41.1e-1633.33Show/hide
Query:  VSVILIFLGIAILVFIHVCIVGRALR------------SGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMG
        V VI++ L + +L+ + +C + R L             S      T+ + R  G+     + R   LD LP F+++         +  DCAVCL KFE  
Subjt:  VSVILIFLGIAILVFIHVCIVGRALR------------SGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMG

Query:  DKCRLLPICKHSFHANCVDQWLLLTPICPICRTSTLQS
        D+ RLLP+C H+FHA+C+D WL+    CP+CR+    S
Subjt:  DKCRLLPICKHSFHANCVDQWLLLTPICPICRTSTLQS

AT4G30400.1 RING/U-box superfamily protein5.3e-1435.07Show/hide
Query:  VVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGN---NNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP
        +++S+I    G+  L+   +       R   F+N   T  +G+     +  D+ + +  +D LP F Y   +     + P DCAVCL +FE  DK RLLP
Subjt:  VVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGN---NNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP

Query:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLES
         C H+FH +C+D WLL    CP+CR+S L  L S
Subjt:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLES

AT4G40070.1 RING/U-box superfamily protein6.9e-1433.1Show/hide
Query:  VSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLD-----KLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP
        V V L FL   + V+I  C            +   ++TR   N   D S R+  LD       P F Y+   E   GS  ++CA+CL + E  +  RLLP
Subjt:  VSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLD-----KLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLP

Query:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLESCGGEGNDV
        IC H FH +C+D WL     CP+CR++        G E + V
Subjt:  ICKHSFHANCVDQWLLLTPICPICRTSTLQSLESCGGEGNDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGGTGGTATCTGTGATATTGATATTTTTGGGAATTGCAATTTTGGTGTTCATTCATGTGTGCATAGTTGGAAGAGCATTGAGATCAGGAGAGTTTGAAAATGA
AACTACTACTACTACTAGGGGAAGAGGCAACAATAATGGAGATGCAAGCCTGCGCAAACATGACTTGGACAAGCTGCCTTGCTTTGAATATAATATGGCTGTGGAGGAAC
CAAAAGGGAGTAGCCCTGTGGATTGTGCTGTTTGCTTGGGCAAATTTGAGATGGGGGACAAGTGTAGGTTATTGCCTATTTGCAAGCATAGCTTCCATGCCAACTGTGTG
GACCAGTGGCTTTTGTTGACTCCTATTTGCCCTATTTGTCGAACGAGTACGCTTCAGTCTCTCGAGAGTTGTGGCGGAGAAGGCAACGACGTCTCGACGGTTCCACCTTC
GAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGGTGGTATCTGTGATATTGATATTTTTGGGAATTGCAATTTTGGTGTTCATTCATGTGTGCATAGTTGGAAGAGCATTGAGATCAGGAGAGTTTGAAAATGA
AACTACTACTACTACTAGGGGAAGAGGCAACAATAATGGAGATGCAAGCCTGCGCAAACATGACTTGGACAAGCTGCCTTGCTTTGAATATAATATGGCTGTGGAGGAAC
CAAAAGGGAGTAGCCCTGTGGATTGTGCTGTTTGCTTGGGCAAATTTGAGATGGGGGACAAGTGTAGGTTATTGCCTATTTGCAAGCATAGCTTCCATGCCAACTGTGTG
GACCAGTGGCTTTTGTTGACTCCTATTTGCCCTATTTGTCGAACGAGTACGCTTCAGTCTCTCGAGAGTTGTGGCGGAGAAGGCAACGACGTCTCGACGGTTCCACCTTC
GAATTGA
Protein sequenceShow/hide protein sequence
MAVVVSVILIFLGIAILVFIHVCIVGRALRSGEFENETTTTTRGRGNNNGDASLRKHDLDKLPCFEYNMAVEEPKGSSPVDCAVCLGKFEMGDKCRLLPICKHSFHANCV
DQWLLLTPICPICRTSTLQSLESCGGEGNDVSTVPPSN