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Spg039556 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039556
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionJHL25P11.1 protein
Genome locationscaffold10:47486126..47486851
RNA-Seq ExpressionSpg039556
SyntenySpg039556
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602743.1 hypothetical protein SDJN03_07976, partial [Cucurbita argyrosperma subsp. sororia]3.4e-5084.8Show/hide
Query:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD
        MLATAAAAA+ WL SSRSRFF LLLCSPLLVPIFCAT P ICAIELCIRL R+R RICLRDSPE ERLRRCEEGGCR AL E++GDDGEE IGLLQRYLD
Subjt:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD

Query:  DQLLLVRSVYECGDGGKDLNGDARF
        DQLLLVRSVYECGD   DL+GDARF
Subjt:  DQLLLVRSVYECGDGGKDLNGDARF

XP_022152501.1 uncharacterized protein LOC111020213 [Momordica charantia]2.1e-4783.2Show/hide
Query:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD
        MLATAAAAA+SWL SSR+RF F+LLCSPLLVPIFCAT PFICAIELCIRL R+RR I LRDSPEIERLRRCEEGGC  AL E    DGEE IGLLQRYLD
Subjt:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD

Query:  DQLLLVRSVYECGDGGKDLNGDARF
        DQLLLVRSVYECGDG  D+NGDARF
Subjt:  DQLLLVRSVYECGDGGKDLNGDARF

XP_022962190.1 uncharacterized protein LOC111462719 [Cucurbita moschata]3.4e-5084.8Show/hide
Query:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD
        MLATAAAAA+ WL SSRSRFF LLLCSPLLVPIFCAT P ICAIELCIRL R+R RICLRDSPE ERLRRCEEGGCR AL E++GDDGEE IGLLQRYLD
Subjt:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD

Query:  DQLLLVRSVYECGDGGKDLNGDARF
        DQLLLVRSVYECGD   DL+GDARF
Subjt:  DQLLLVRSVYECGDGGKDLNGDARF

XP_022990172.1 uncharacterized protein LOC111487144 [Cucurbita maxima]4.2e-4882.4Show/hide
Query:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD
        MLATAAAAA+ WL  SRSRFF LLLCSPLLVPIFCAT P ICAIELCIRL R+R RICLRDSPE ERLRRCEEGGCR AL E++GDDGEE IGLL RYLD
Subjt:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD

Query:  DQLLLVRSVYECGDGGKDLNGDARF
        DQLLLVRSVY CGD   DL+GDARF
Subjt:  DQLLLVRSVYECGDGGKDLNGDARF

XP_023550754.1 uncharacterized protein LOC111808798 [Cucurbita pepo subsp. pepo]3.4e-5084.8Show/hide
Query:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD
        MLATAAAAA+ WL SSRSRFF LLLCSPLLVPIFCAT P ICAIELCIRL R+R RICLRDSPE ERLRRCEEGGCR AL E++GDDGEE IGLLQRYLD
Subjt:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD

Query:  DQLLLVRSVYECGDGGKDLNGDARF
        DQLLLVRSVYECGD   DL+GDARF
Subjt:  DQLLLVRSVYECGDGGKDLNGDARF

TrEMBL top hitse value%identityAlignment
A0A2P5A925 Uncharacterized protein2.1e-2455.22Show/hide
Query:  MLATAAAA--ATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLR----DSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGL
        MLA AAAA  ++SWL S R R+ FL LCSP+L+P  CAT P +CA ELC+RL R RRR   R    DS + +RLRRCEEG C        G +GEEV GL
Subjt:  MLATAAAA--ATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLR----DSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGL

Query:  LQRYLDDQLLLVRSVYECGDGGKDLNGDARFWEG
        LQRYL+DQL+LV S+Y+CG+   D++GD    EG
Subjt:  LQRYLDDQLLLVRSVYECGDGGKDLNGDARFWEG

A0A6J1DHX6 uncharacterized protein LOC1110202131.0e-4783.2Show/hide
Query:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD
        MLATAAAAA+SWL SSR+RF F+LLCSPLLVPIFCAT PFICAIELCIRL R+RR I LRDSPEIERLRRCEEGGC  AL E    DGEE IGLLQRYLD
Subjt:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD

Query:  DQLLLVRSVYECGDGGKDLNGDARF
        DQLLLVRSVYECGDG  D+NGDARF
Subjt:  DQLLLVRSVYECGDGGKDLNGDARF

A0A6J1HEC7 uncharacterized protein LOC1114627191.7e-5084.8Show/hide
Query:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD
        MLATAAAAA+ WL SSRSRFF LLLCSPLLVPIFCAT P ICAIELCIRL R+R RICLRDSPE ERLRRCEEGGCR AL E++GDDGEE IGLLQRYLD
Subjt:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD

Query:  DQLLLVRSVYECGDGGKDLNGDARF
        DQLLLVRSVYECGD   DL+GDARF
Subjt:  DQLLLVRSVYECGDGGKDLNGDARF

A0A6J1JHX7 uncharacterized protein LOC1114871442.0e-4882.4Show/hide
Query:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD
        MLATAAAAA+ WL  SRSRFF LLLCSPLLVPIFCAT P ICAIELCIRL R+R RICLRDSPE ERLRRCEEGGCR AL E++GDDGEE IGLL RYLD
Subjt:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLD

Query:  DQLLLVRSVYECGDGGKDLNGDARF
        DQLLLVRSVY CGD   DL+GDARF
Subjt:  DQLLLVRSVYECGDGGKDLNGDARF

A0A7J6E883 Uncharacterized protein6.0e-2450.35Show/hide
Query:  MLATAAAAAT---SWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLV--RYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLL
        MLA+ +AAAT   SWLHS R R+ FLLLCSP+L+P  CA+ PF+CA ELC+R+   R  RR    +  E +RLRRCEEG C        G    E +GLL
Subjt:  MLATAAAAAT---SWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLV--RYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLL

Query:  QRYLDDQLLLVRSVYECGDGGKDLNG-DARFWEGSKEVIACTV
        QRYL+DQL+LV S+Y+CGD G+  +G D+ F+        CTV
Subjt:  QRYLDDQLLLVRSVYECGDGGKDLNG-DARFWEGSKEVIACTV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G35430.1 unknown protein1.9e-2252.17Show/hide
Query:  WLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIE--RLRRCEEG-GCRPALLEEIGDDGEEVIGLLQRYLDDQLLLVRS
        WL + RSRF F LLCSPLL+PI CA++P +CA+E+  RL R R     + + E +  RLRRCEEG GC        G D  E  GLLQRYL+DQL+LVRS
Subjt:  WLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIE--RLRRCEEG-GCRPALLEEIGDDGEEVIGLLQRYLDDQLLLVRS

Query:  VYECGDGGKDLNGDA
        VY+CG+  +D + D+
Subjt:  VYECGDGGKDLNGDA

AT4G09170.1 unknown protein6.3e-1039.53Show/hide
Query:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRI-----------CLRDSPEIERLRRCEEGGCRPALLEEIGDDGE
        ML  A+  +T W     SR  FL+LCSPLL    C ++P +CA+E+  RL+    RI            L D  +  RLR+CEEG     + EE   D  
Subjt:  MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRI-----------CLRDSPEIERLRRCEEGGCRPALLEEIGDDGE

Query:  EVIGLLQRYLDDQLLLVRSVYECGDGGKD
        E  GLL RYLD+QL L R++++  DG +D
Subjt:  EVIGLLQRYLDDQLLLVRSVYECGDGGKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCCACGGCCGCCGCCGCCGCCACTTCTTGGCTTCATTCCAGCCGGAGCCGCTTTTTCTTTCTCTTGCTTTGTTCTCCCCTCCTCGTTCCCATTTTCTGCGCTAC
TCTCCCCTTCATCTGTGCCATAGAGCTCTGCATCCGCCTTGTTCGTTATAGGCGAAGGATATGTCTTCGCGATTCCCCTGAAATCGAACGGTTGCGGCGATGTGAGGAAG
GCGGCTGCAGACCAGCGCTCCTGGAGGAGATTGGTGATGACGGGGAGGAGGTGATCGGCCTATTACAGAGGTACTTGGATGATCAGCTACTGCTTGTTCGATCTGTTTAT
GAATGTGGGGATGGTGGCAAAGACTTAAATGGAGATGCTCGATTTTGGGAAGGAAGCAAGGAAGTTATAGCCTGTACTGTAGGAATGCGGTTTGAATGGGAATGGCAACT
GCATTCTGCAGGCAACGAGGCATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGCCACGGCCGCCGCCGCCGCCACTTCTTGGCTTCATTCCAGCCGGAGCCGCTTTTTCTTTCTCTTGCTTTGTTCTCCCCTCCTCGTTCCCATTTTCTGCGCTAC
TCTCCCCTTCATCTGTGCCATAGAGCTCTGCATCCGCCTTGTTCGTTATAGGCGAAGGATATGTCTTCGCGATTCCCCTGAAATCGAACGGTTGCGGCGATGTGAGGAAG
GCGGCTGCAGACCAGCGCTCCTGGAGGAGATTGGTGATGACGGGGAGGAGGTGATCGGCCTATTACAGAGGTACTTGGATGATCAGCTACTGCTTGTTCGATCTGTTTAT
GAATGTGGGGATGGTGGCAAAGACTTAAATGGAGATGCTCGATTTTGGGAAGGAAGCAAGGAAGTTATAGCCTGTACTGTAGGAATGCGGTTTGAATGGGAATGGCAACT
GCATTCTGCAGGCAACGAGGCATTTTAA
Protein sequenceShow/hide protein sequence
MLATAAAAATSWLHSSRSRFFFLLLCSPLLVPIFCATLPFICAIELCIRLVRYRRRICLRDSPEIERLRRCEEGGCRPALLEEIGDDGEEVIGLLQRYLDDQLLLVRSVY
ECGDGGKDLNGDARFWEGSKEVIACTVGMRFEWEWQLHSAGNEAF