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Spg039585 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039585
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranslation initiation factor IF-2
Genome locationscaffold10:45918290..45921536
RNA-Seq ExpressionSpg039585
SyntenySpg039585
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0055028 - cortical microtubule (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578448.1 hypothetical protein SDJN03_22896, partial [Cucurbita argyrosperma subsp. sororia]4.7e-4994.59Show/hide
Query:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL
        LGD  MNRSFRALESQMQAPV+QRQQQVGGLRASV KDKEEELALFLEMRKREKERNDLLSN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFL
Subjt:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL

Query:  NSDNDKNDYDW
        NSDNDKNDYDW
Subjt:  NSDNDKNDYDW

KAG7016011.1 hypothetical protein SDJN02_21115 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-4994.59Show/hide
Query:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL
        LGD  MNRSFRALESQMQAPV+QRQQQVGGLRASV KDKEEELALFLEMRKREKERNDLLSN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFL
Subjt:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL

Query:  NSDNDKNDYDW
        NSDNDKNDYDW
Subjt:  NSDNDKNDYDW

XP_022939313.1 flocculation protein FLO11-like [Cucurbita moschata]2.1e-4995.5Show/hide
Query:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL
        LGD  MNRSFRALESQMQAPVKQRQQQVGGLRASV KDKEEELALFLEMRKREKERNDLLSN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFL
Subjt:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL

Query:  NSDNDKNDYDW
        NSDNDKNDYDW
Subjt:  NSDNDKNDYDW

XP_023551118.1 flocculation protein FLO11-like [Cucurbita pepo subsp. pepo]2.1e-4995.5Show/hide
Query:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL
        LGD  MNRSFRALESQMQAPVKQRQQQVGGLRASV KDKEEELALFLEMRKREKERNDLLSN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFL
Subjt:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL

Query:  NSDNDKNDYDW
        NSDNDKNDYDW
Subjt:  NSDNDKNDYDW

XP_038885154.1 endochitinase A [Benincasa hispida]5.6e-5098.18Show/hide
Query:  GDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLN
        G L MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLN
Subjt:  GDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLN

Query:  SDNDKNDYDW
        SDNDKNDYDW
Subjt:  SDNDKNDYDW

TrEMBL top hitse value%identityAlignment
A0A1S3B3G3 endochitinase A isoform X14.8e-4798.11Show/hide
Query:  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDND
        MNRSFRALESQMQAPVKQR QQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPL TKPGTSPIFNISSATPAPTRKTGADDFLNSDND
Subjt:  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDND

Query:  KNDYDW
        KNDYDW
Subjt:  KNDYDW

A0A6J1BXA9 mucin-5AC isoform X16.7e-4998.11Show/hide
Query:  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDND
        MNRSFRALESQMQAPV+QRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFLNSDND
Subjt:  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDND

Query:  KNDYDW
        KNDYDW
Subjt:  KNDYDW

A0A6J1FLB1 flocculation protein FLO11-like1.0e-4995.5Show/hide
Query:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL
        LGD  MNRSFRALESQMQAPVKQRQQQVGGLRASV KDKEEELALFLEMRKREKERNDLLSN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFL
Subjt:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL

Query:  NSDNDKNDYDW
        NSDNDKNDYDW
Subjt:  NSDNDKNDYDW

A0A6J1JP82 zonadhesin1.6e-4796.23Show/hide
Query:  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDND
        MNRSFRALESQ+QAP K RQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNN EEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDND
Subjt:  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDND

Query:  KNDYDW
        KNDYDW
Subjt:  KNDYDW

A0A6J1JXM8 flocculation protein FLO11-like1.5e-4893.69Show/hide
Query:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL
        LGD  MNRSFRA ESQMQAPVKQRQQQ GGLRASV KDKEEELALFLEMRKREKERNDLLSN+AEEFDAPLGTKPGTSPIFNI+SATPAPTRKTGADDFL
Subjt:  LGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFL

Query:  NSDNDKNDYDW
        NSDNDKNDYDW
Subjt:  NSDNDKNDYDW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38160.1 unknown protein8.4e-0435.9Show/hide
Query:  VMKDKEEELALFLEMRKREKERN-DLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW
        V++D +EEL+LFLEMR+REK +    LS           TK        +   +    R++  + FL+S+NDK+DY+W
Subjt:  VMKDKEEELALFLEMRKREKERN-DLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW

AT2G38160.2 unknown protein8.4e-0435.9Show/hide
Query:  VMKDKEEELALFLEMRKREKERN-DLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW
        V++D +EEL+LFLEMR+REK +    LS           TK        +   +    R++  + FL+S+NDK+DY+W
Subjt:  VMKDKEEELALFLEMRKREKERN-DLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW

AT2G40070.1 BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1)7.1e-2761.68Show/hide
Query:  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKER-NDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDN
        MNRSFRA ES +    ++++QQ   LRAS+M +K+EEL+LFLEMR+REKE+ N LL+NN +EF+ PLG+K GTSP+FNISS  P P+RK   DDFLNS+ 
Subjt:  MNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKER-NDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDN

Query:  DKNDYDW
        DKNDY+W
Subjt:  DKNDYDW

AT2G40070.2 FUNCTIONS IN: molecular_function unknown4.3e-1665.62Show/hide
Query:  MRKREKER-NDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW
        MR+REKE+ N LL+NN +EF+ PLG+K GTSP+FNISS  P P+RK   DDFLNS+ DKNDY+W
Subjt:  MRKREKER-NDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW

AT3G09000.1 proline-rich family protein3.7e-0742.68Show/hide
Query:  DKEEELALFLEMRKREKER--------NDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW
        D++EEL+LFLEMR+REKE         +D +S NA    A      G S     +S+   P R+T A++FL S+N+K+DYDW
Subjt:  DKEEELALFLEMRKREKER--------NDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGAGAGGCTTGCAGTGGGAGAAGCGAATTTGGATGCGGATTCTTCACCTATTGGGTTGTGCTTGGAAGTGTTGTGGCCGGGGAGCTTCACTGCAGATCTAATTGACTT
GGGGGATTTAGACATGAATCGTAGCTTTAGGGCTTTGGAATCGCAAATGCAAGCTCCGGTAAAGCAGCGGCAGCAGCAAGTTGGGGGACTGAGGGCGTCGGTGATGAAAG
ATAAGGAGGAGGAGCTTGCTTTGTTCTTAGAAATGAGAAAGCGTGAGAAAGAGAGGAATGATCTTCTCTCTAACAACGCGGAAGAGTTCGATGCGCCTTTAGGAACAAAA
CCAGGAACTTCTCCAATATTTAACATCTCATCAGCGACTCCAGCCCCTACACGCAAGACTGGTGCTGATGATTTTCTTAATTCTGACAATGATAAAAATGATTATGATTG
GTAA
mRNA sequenceShow/hide mRNA sequence
TTAGAGAGGCTTGCAGTGGGAGAAGCGAATTTGGATGCGGATTCTTCACCTATTGGGTTGTGCTTGGAAGTGTTGTGGCCGGGGAGCTTCACTGCAGATCTAATTGACTT
GGGGGATTTAGACATGAATCGTAGCTTTAGGGCTTTGGAATCGCAAATGCAAGCTCCGGTAAAGCAGCGGCAGCAGCAAGTTGGGGGACTGAGGGCGTCGGTGATGAAAG
ATAAGGAGGAGGAGCTTGCTTTGTTCTTAGAAATGAGAAAGCGTGAGAAAGAGAGGAATGATCTTCTCTCTAACAACGCGGAAGAGTTCGATGCGCCTTTAGGAACAAAA
CCAGGAACTTCTCCAATATTTAACATCTCATCAGCGACTCCAGCCCCTACACGCAAGACTGGTGCTGATGATTTTCTTAATTCTGACAATGATAAAAATGATTATGATTG
GTAA
Protein sequenceShow/hide protein sequence
LERLAVGEANLDADSSPIGLCLEVLWPGSFTADLIDLGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTK
PGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW