; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039611 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039611
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description(thale cress) hypothetical protein
Genome locationscaffold10:41152666..41153635
RNA-Seq ExpressionSpg039611
SyntenySpg039611
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016058.1 hypothetical protein SDJN02_21162 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-6085.03Show/hide
Query:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA
        F       PISSN GLSQILY PK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAV S FSRYREAIGLQIEAFFRRNYL 
Subjt:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA

Query:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA
        LLGFGA LVCALLWRIMFGIANTFVG+SEGMAKYGFLALSSAIVAFA
Subjt:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA

XP_004141508.1 uncharacterized protein LOC101215996 [Cucumis sativus]3.5e-5982.43Show/hide
Query:  PRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNY
        P F      KPISSNVGLSQ LY+PKL+ GNSSL TKLN +H  SRFRFFSVK P FGGQINGNFAKKV+DKPAAAVSS FSRYREAIGLQIEAFF+RNY
Subjt:  PRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNY

Query:  LALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAF
        L LLGF A L+CALLW+IMFGIANTFVGLSEGMAKYGFLALSSAIVAF
Subjt:  LALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAF

XP_022938904.1 uncharacterized protein LOC111444978 [Cucurbita moschata]3.1e-6085.03Show/hide
Query:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA
        F       PISSN GLSQILY PK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAV S FSRYREAIGLQIEAFFRRNYL 
Subjt:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA

Query:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA
        LLGFGA LVCALLWRIMFGIANTFVG+SEGMAKYGFLALSSAIVAFA
Subjt:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA

XP_022993023.1 uncharacterized protein LOC111489167 [Cucurbita maxima]3.1e-6084.35Show/hide
Query:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA
        F+ +S Q   SSN GLSQILY PK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQINGNFAKKVLDKP AAV S FSRYREAIGLQIEAFFRRNYL 
Subjt:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA

Query:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA
        LLGFGA LVCALLWRIMFG+ANTFVGLSEGMAKYGFLALSSAIVAFA
Subjt:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA

XP_023551594.1 uncharacterized protein LOC111809375 [Cucurbita pepo subsp. pepo]2.8e-6185.71Show/hide
Query:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA
        F+ +S Q   SSN GLSQILYTPK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAV S FSRYREAIGLQIEAFFRRNYL 
Subjt:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA

Query:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA
        LLGFGA LVCALLWRIMFG+ANTFVGLSEGMAKYGFLALSSAIVAFA
Subjt:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA

TrEMBL top hitse value%identityAlignment
A0A0A0KSP6 Uncharacterized protein1.7e-5982.43Show/hide
Query:  PRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNY
        P F      KPISSNVGLSQ LY+PKL+ GNSSL TKLN +H  SRFRFFSVK P FGGQINGNFAKKV+DKPAAAVSS FSRYREAIGLQIEAFF+RNY
Subjt:  PRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNY

Query:  LALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAF
        L LLGF A L+CALLW+IMFGIANTFVGLSEGMAKYGFLALSSAIVAF
Subjt:  LALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAF

A0A5D3BP90 60S ribosomal protein L10-like3.7e-5982.43Show/hide
Query:  PRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNY
        P F      KPISSNVGLSQ LY+PKL+ GNSSL TKLN +   SRFRFFSVK P FGGQINGNFAKKV+DKPAAAVSS FSRYREA+GLQIEAFF+RNY
Subjt:  PRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNY

Query:  LALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAF
        L LLGFGA L+CALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAF
Subjt:  LALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAF

A0A6J1FFG8 uncharacterized protein LOC1114449781.5e-6085.03Show/hide
Query:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA
        F       PISSN GLSQILY PK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAV S FSRYREAIGLQIEAFFRRNYL 
Subjt:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA

Query:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA
        LLGFGA LVCALLWRIMFGIANTFVG+SEGMAKYGFLALSSAIVAFA
Subjt:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA

A0A6J1H883 uncharacterized protein LOC1114610242.9e-5983.33Show/hide
Query:  PPRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRN
        P +F  N    PISSN+GLSQILYTPKL  GNSSLAT  N +   SRFR FS KTPGFGGQINGNFAKKVLDKPAAAVSS FSRYREAIGLQIEAFFRRN
Subjt:  PPRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRN

Query:  YLALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA
        YL LLGFGA LVCALLWRIMFGIANTF+G SEGMAKYGFLALSSAIVAFA
Subjt:  YLALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA

A0A6J1K0Y8 uncharacterized protein LOC1114891671.5e-6084.35Show/hide
Query:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA
        F+ +S Q   SSN GLSQILY PK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQINGNFAKKVLDKP AAV S FSRYREAIGLQIEAFFRRNYL 
Subjt:  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLA

Query:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA
        LLGFGA LVCALLWRIMFG+ANTFVGLSEGMAKYGFLALSSAIVAFA
Subjt:  LLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G40800.1 unknown protein2.8e-3857.41Show/hide
Query:  IPSPEIFPPQPPRFNRNSL-QKPISSNVGLSQILYTPKLSVG-NSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREA
        IPS  +   Q P+F+ +SL  KP S NVGL QIL +PKL+     +L        F S FR  S K+ GF  +++G+FA+KV+DKP  AVSSTF+RYREA
Subjt:  IPSPEIFPPQPPRFNRNSL-QKPISSNVGLSQILYTPKLSVG-NSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREA

Query:  IGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA
        IGL I+AF+++N L + G     VC  LWRIMFGIA+TFVGLSEGMAKYGFLALSSAIVAF+
Subjt:  IGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA

AT3G56430.1 unknown protein7.3e-3956.1Show/hide
Query:  IPSPEIFPPQPPRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKL----NGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYR
        +PS  +   QP     + L +P S NVGLSQIL +PKL  G  +    L       +FVS FR FS  + GF  +++GNFA+KV+DKP  AVSSTF+RYR
Subjt:  IPSPEIFPPQPPRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKL----NGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYR

Query:  EAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA
         A+GL ++AF+++N L + G GA  VC  LWR+MFGIA+TFVGLSEGMAKYGFLALSSAIVAFA
Subjt:  EAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCCTCCCTTCTCACCCCTTCTTCGAGATCCCATCGCCCGAAATTTTTCCTCCCCAGCCTCCTCGTTTCAATCGAAATTCCCTTCAAAAACCCATTTCTTCAAA
TGTTGGTTTGTCCCAGATCCTCTATACTCCCAAGCTCAGTGTTGGAAATTCTTCTTTAGCTACTAAATTGAATGGCTATCACTTTGTCTCTAGGTTTAGATTCTTCTCTG
TAAAGACTCCGGGTTTTGGGGGCCAAATCAATGGAAATTTTGCTAAGAAGGTCCTTGATAAGCCCGCTGCGGCTGTTAGTTCCACATTTTCGAGGTATCGGGAAGCCATA
GGGTTGCAAATTGAGGCTTTCTTCAGAAGAAACTATCTAGCTCTACTGGGGTTTGGAGCAACTCTTGTTTGTGCATTGCTCTGGAGGATTATGTTTGGTATTGCGAACAC
CTTTGTTGGGCTCTCTGAAGGCATGGCCAAGTATGGATTTCTTGCTTTATCTTCAGCTATCGTTGCTTTTGCTAAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCCTCCCTTCTCACCCCTTCTTCGAGATCCCATCGCCCGAAATTTTTCCTCCCCAGCCTCCTCGTTTCAATCGAAATTCCCTTCAAAAACCCATTTCTTCAAA
TGTTGGTTTGTCCCAGATCCTCTATACTCCCAAGCTCAGTGTTGGAAATTCTTCTTTAGCTACTAAATTGAATGGCTATCACTTTGTCTCTAGGTTTAGATTCTTCTCTG
TAAAGACTCCGGGTTTTGGGGGCCAAATCAATGGAAATTTTGCTAAGAAGGTCCTTGATAAGCCCGCTGCGGCTGTTAGTTCCACATTTTCGAGGTATCGGGAAGCCATA
GGGTTGCAAATTGAGGCTTTCTTCAGAAGAAACTATCTAGCTCTACTGGGGTTTGGAGCAACTCTTGTTTGTGCATTGCTCTGGAGGATTATGTTTGGTATTGCGAACAC
CTTTGTTGGGCTCTCTGAAGGCATGGCCAAGTATGGATTTCTTGCTTTATCTTCAGCTATCGTTGCTTTTGCTAAAAGTTGA
Protein sequenceShow/hide protein sequence
MAALPSHPFFEIPSPEIFPPQPPRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAI
GLQIEAFFRRNYLALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFAKS