; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039709 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039709
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L10-like
Genome locationscaffold10:45409236..45411796
RNA-Seq ExpressionSpg039709
SyntenySpg039709
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001197 - Ribosomal protein L10e
IPR016180 - Ribosomal protein L10e/L16
IPR018255 - Ribosomal protein L10e, conserved site
IPR036920 - Ribosomal protein L10e/L16 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7121006.1 hypothetical protein RHSIM_Rhsim13G0057500 [Rhododendron simsii]1.8e-5885.71Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTK+SR+DYL +KAEN+
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKVTSWMPWTFSKSSTWKSFSTSNCL
        IL DGVNAKVTS +PWT S +STWKS     CL
Subjt:  ILPDGVNAKVTSWMPWTFSKSSTWKSFSTSNCL

KCW50319.1 hypothetical protein EUGRSUZ_J00099 [Eucalyptus grandis]7.9e-6287.97Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+NS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYL +K+ENK
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKVTSWMPWTFSKSSTWKSFSTSNCL
        I+PDGVNAKVT WMPWT  + STWKSF   NCL
Subjt:  ILPDGVNAKVTSWMPWTFSKSSTWKSFSTSNCL

XP_004141510.1 60S ribosomal protein L10 [Cucumis sativus]2.7e-5496.36Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        ILPDGVNAK+
Subjt:  ILPDGVNAKV

XP_008459481.1 PREDICTED: 60S ribosomal protein L10-like [Cucumis melo]2.7e-5496.36Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        ILPDGVNAK+
Subjt:  ILPDGVNAKV

XP_038891235.1 60S ribosomal protein L10-like [Benincasa hispida]2.7e-5496.36Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        ILPDGVNAK+
Subjt:  ILPDGVNAKV

TrEMBL top hitse value%identityAlignment
A0A059A9A7 Ribosomal_L16 domain-containing protein3.8e-6287.97Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+NS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYL +K+ENK
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKVTSWMPWTFSKSSTWKSFSTSNCL
        I+PDGVNAKVT WMPWT  + STWKSF   NCL
Subjt:  ILPDGVNAKVTSWMPWTFSKSSTWKSFSTSNCL

A0A0A0KVY2 Ribosomal_L16 domain-containing protein1.3e-5496.36Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        ILPDGVNAK+
Subjt:  ILPDGVNAKV

A0A1S3CAD5 60S ribosomal protein L10-like1.3e-5496.36Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        ILPDGVNAK+
Subjt:  ILPDGVNAKV

A0A6J1G6Y3 60S ribosomal protein L10-like1.7e-5494.55Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYL +K+ENK
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        I+PDGVNAK+
Subjt:  ILPDGVNAKV

A0A6J1L4H1 60S ribosomal protein L10-like1.7e-5494.55Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYL +K+ENK
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        I+PDGVNAK+
Subjt:  ILPDGVNAKV

SwissProt top hitse value%identityAlignment
P45633 60S ribosomal protein L102.4e-5389.09Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNN+ HA EALRRAKFKFP RQKII SRKWGFTKFSRADYL YK+E +
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        I+PDGVNAK+
Subjt:  ILPDGVNAKV

P93847 60S ribosomal protein L108.2e-5490Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARV IGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR DYL YK+EN+
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        I+PDGVNAK+
Subjt:  ILPDGVNAKV

Q40592 60S ribosomal protein L10 (Fragment)1.5e-5288.18Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARV IGQVLLSVRCKD N+ HAQEALRRAKFKFP RQKIIVSRKWGFTKFSR DYL YK+EN+
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        I+PDGVNAK+
Subjt:  ILPDGVNAKV

Q9M5M7 60S ribosomal protein L101.0e-5188.18Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARV IGQVLLSVRCKDNNS +AQEALRRAKFKFPGRQKIIVSRKWGFTK +RADY   K+EN+
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        ILPDGVNAK+
Subjt:  ILPDGVNAKV

Q9SPB3 60S ribosomal protein L109.1e-5387.27Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKWGFTKF+R DY+ +K++N+
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKV
        ILPDGVNAK+
Subjt:  ILPDGVNAKV

Arabidopsis top hitse value%identityAlignment
AT1G14320.1 Ribosomal protein L16p/L10e family protein2.8e-4981.25Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGK  GTCARV IGQVLLSVRCKD +  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD+   + E +
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKVTS
        ++PDGVNAK  S
Subjt:  ILPDGVNAKVTS

AT1G14320.2 Ribosomal protein L16p/L10e family protein1.8e-2475Show/hide
Query:  VLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENKILPDGVNAKVTS
        VLLSVRCKD +  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD+   + E +++PDGVNAK  S
Subjt:  VLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENKILPDGVNAKVTS

AT1G26910.1 Ribosomal protein L16p/L10e family protein7.4e-5083.04Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGK  GTCARV IGQVLLSVRCKD +  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RADY   + E +
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKVTS
        I+PDGVNAK  S
Subjt:  ILPDGVNAKVTS

AT1G66580.1 senescence associated gene 247.4e-5083.04Show/hide
Query:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK
        +VHPFHVLRINKMLSCAGADRLQTGMRGAFGK  GTCARV IGQVLLSVRCKDN+  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+Y   +A  +
Subjt:  KVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENK

Query:  ILPDGVNAKVTS
        I+PDGVNAK  S
Subjt:  ILPDGVNAKVTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTGGTATTCACTAATTGCTACGGGACGAGCCGACGAGGTCAAGTTCGAGCAGAGAGGGTCTAAAGGAACGTACGCGCGAGATGGGGAGAAGGTGCATCCCTTCCA
TGTTCTGCGAATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTCGGTAAACCACAAGGAACCTGTGCAAGAGTGGACATTG
GTCAGGTTCTTCTTTCAGTTCGCTGCAAGGATAACAACAGCCAGCATGCACAGGAGGCCCTCCGCCGTGCTAAGTTCAAATTCCCTGGTCGTCAGAAGATCATTGTCAGC
AGGAAGTGGGGATTCACTAAATTCAGTCGGGCTGATTATCTGGCTTACAAGGCAGAGAACAAAATTCTTCCAGATGGTGTAAACGCCAAGGTAACTTCTTGGATGCCATG
GACCTTTAGCAAATCGTCAACCTGGAAGAGCTTTTCTACCTCAAACTGCCTAAGTTCAGCTAGTTATTTCGCTTTGTCTTTGCTGTCTCTTTTCGTTTTTGACAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTGGTATTCACTAATTGCTACGGGACGAGCCGACGAGGTCAAGTTCGAGCAGAGAGGGTCTAAAGGAACGTACGCGCGAGATGGGGAGAAGGTGCATCCCTTCCA
TGTTCTGCGAATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTCGGTAAACCACAAGGAACCTGTGCAAGAGTGGACATTG
GTCAGGTTCTTCTTTCAGTTCGCTGCAAGGATAACAACAGCCAGCATGCACAGGAGGCCCTCCGCCGTGCTAAGTTCAAATTCCCTGGTCGTCAGAAGATCATTGTCAGC
AGGAAGTGGGGATTCACTAAATTCAGTCGGGCTGATTATCTGGCTTACAAGGCAGAGAACAAAATTCTTCCAGATGGTGTAAACGCCAAGGTAACTTCTTGGATGCCATG
GACCTTTAGCAAATCGTCAACCTGGAAGAGCTTTTCTACCTCAAACTGCCTAAGTTCAGCTAGTTATTTCGCTTTGTCTTTGCTGTCTCTTTTCGTTTTTGACAGTTGA
Protein sequenceShow/hide protein sequence
MQWYSLIATGRADEVKFEQRGSKGTYARDGEKVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVS
RKWGFTKFSRADYLAYKAENKILPDGVNAKVTSWMPWTFSKSSTWKSFSTSNCLSSASYFALSLLSLFVFDS