; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039757 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039757
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold10:42098067..42099691
RNA-Seq ExpressionSpg039757
SyntenySpg039757
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96496.1 chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa]1.6e-13798.37Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIAT AFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

XP_004143800.1 chlorophyll a-b binding protein 6A, chloroplastic [Cucumis sativus]1.7e-13697.56Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIAT AFPSVLSSSKSKFA  VPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

XP_008453995.1 PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo]7.0e-13898.37Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIAT AFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

XP_022133484.1 chlorophyll a-b binding protein 6A, chloroplastic [Momordica charantia]2.6e-13797.97Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIAT AFPSVLSSSKSKFAAAVPISGV  NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

XP_038891246.1 chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida]2.4e-13899.19Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIAT AFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGS+PGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

TrEMBL top hitse value%identityAlignment
A0A0A0KNM4 Chlorophyll a-b binding protein, chloroplastic8.3e-13797.56Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIAT AFPSVLSSSKSKFA  VPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

A0A1S3BYE0 Chlorophyll a-b binding protein, chloroplastic3.4e-13898.37Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIAT AFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

A0A5A7TXV7 Chlorophyll a-b binding protein, chloroplastic3.4e-13898.37Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIAT AFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS+EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

A0A5D3BC57 Chlorophyll a-b binding protein, chloroplastic7.5e-13898.37Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIAT AFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS EWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

A0A6J1BW39 Chlorophyll a-b binding protein, chloroplastic1.3e-13797.97Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIAT AFPSVLSSSKSKFAAAVPISGV  NASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPR+ISP
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

SwissProt top hitse value%identityAlignment
P12360 Chlorophyll a-b binding protein 6A, chloroplastic6.2e-12186.18Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGI  +  PS LSS+KSKFAAA+P+   A N  SRFSMSA+WMPGQPRP YLDGSAPGDFGFD L LGEVP NLER+KESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA
        PGI+VPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSKDP K +E KVKEIKNGRLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLA

Query:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP
        LLA VGFCVQQSAY GTGPLENLATHLADPWHNNIGD+IIP+ I P
Subjt:  LLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP

Q01667 Chlorophyll a-b binding protein 6, chloroplastic2.4e-11785.12Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA + +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP+KL+E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic3.8e-3840.95Show/hide
Query:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP
        W PG   P +LDGS  GD+GFDP  LG+  E                                            ++RF+E ELIH RWAMLA  G L  
Subjt:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP

Query:  EALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV
        E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DPEK  + ++ EIK+ RLA++AF+
Subjt:  EALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV

Query:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD

Q9SDM1 Chlorophyll a-b binding protein 1B-21, chloroplastic3.6e-10574.9Show/hide
Query:  ASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVP
        +S+ L SC  + +  PS+L+ S     + +P    A   S R +MSAEW PGQPRP +LDGS+PGDFGFDPL L  VPEN ERFKESE+ HCRWAML VP
Subjt:  ASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVP

Query:  GILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLAL
        G+LVPEALGLGNWVKAQEWAA+P GQATYLG PVPWG LPTIL IEFLAIAF E QR+MEKDPEKKKYPGGAFDPLG+SKDP K +E K+KEIKNGRLA+
Subjt:  GILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLAL

Query:  LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSI
        LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IPR+I
Subjt:  LAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSI

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic1.9e-3738.2Show/hide
Query:  SVLSSSKSKFAAAVPISGVAVN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE----------------------------------
        S +SS+ S+F A         +   A +  S    W PG   P YLDGS  GD+GFDP  LG+  E                                  
Subjt:  SVLSSSKSKFAAAVPISGVAVN---ASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE----------------------------------

Query:  ---------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPG
                  L+RF+E ELIH RWAMLA  G +  E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPG
Subjt:  ---------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPG

Query:  GA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        G  FDPLG + DP K  + ++ EIK+ RLA++ F+GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD

Arabidopsis top hitse value%identityAlignment
AT3G54890.1 photosystem I light harvesting complex gene 11.7e-11885.12Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA + +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP+KL+E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

AT3G54890.2 photosystem I light harvesting complex gene 17.3e-9371.9Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA + +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAF                                  E KVKEIKNGRL
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRL

Query:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  ALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

AT3G54890.3 photosystem I light harvesting complex gene 17.8e-6378.81Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA + +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLA
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA

AT3G54890.4 photosystem I light harvesting complex gene 12.0e-9081.91Show/hide
Query:  MASNTLMSCGIATIAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA + +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YLDGSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATIAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGR
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDP+KL+E KVKEIKNG+
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGR

AT5G01530.1 light harvesting complex photosystem II2.7e-3940.95Show/hide
Query:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP
        W PG   P +LDGS  GD+GFDP  LG+  E                                            ++RF+E ELIH RWAMLA  G L  
Subjt:  WMPGQPRPPYLDGSAPGDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLAVPGILVP

Query:  EALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV
        E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DPEK  + ++ EIK+ RLA++AF+
Subjt:  EALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEKLKEYKVKEIKNGRLALLAFV

Query:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GFCVQQSAYPGTGPLENLATHLADPWHNNIGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACCATCGCCTTCCCTTCTGTCCTATCTTCCTCCAAGTCCAAATTCGCCGCCGCTGTCCCGATTTCCGGCGTCGC
CGTCAATGCCTCCTCGCGCTTCTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCGCCGTACCTCGACGGCTCTGCCCCCGGTGATTTTGGCTTTGACCCTCTTC
GGTTGGGAGAAGTGCCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCTAATCCACTGCAGATGGGCCATGCTTGCTGTTCCAGGAATTTTGGTACCTGAGGCGTTGGGA
TTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCCATTCCAGGAGGCCAAGCTACCTACTTGGGGCAACCAGTTCCATGGGGAACTTTGCCTACCATTTTGGTCATTGA
GTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGAGGCGCTTTCGACCCATTGGGCTACTCAAAAGACCCTG
AAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAATGGTCGGTTGGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACCCAGGAACTGGGCCATTG
GAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATCATCATCCCCAGATCGATTTCGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACCATCGCCTTCCCTTCTGTCCTATCTTCCTCCAAGTCCAAATTCGCCGCCGCTGTCCCGATTTCCGGCGTCGC
CGTCAATGCCTCCTCGCGCTTCTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCGCCGTACCTCGACGGCTCTGCCCCCGGTGATTTTGGCTTTGACCCTCTTC
GGTTGGGAGAAGTGCCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCTAATCCACTGCAGATGGGCCATGCTTGCTGTTCCAGGAATTTTGGTACCTGAGGCGTTGGGA
TTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCCATTCCAGGAGGCCAAGCTACCTACTTGGGGCAACCAGTTCCATGGGGAACTTTGCCTACCATTTTGGTCATTGA
GTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGAGGCGCTTTCGACCCATTGGGCTACTCAAAAGACCCTG
AAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAATGGTCGGTTGGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACCCAGGAACTGGGCCATTG
GAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATCATCATCCCCAGATCGATTTCGCCTTGA
Protein sequenceShow/hide protein sequence
MASNTLMSCGIATIAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALG
LGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPL
ENLATHLADPWHNNIGDIIIPRSISP