; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039785 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039785
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein farnesyltransferase subunit beta
Genome locationscaffold10:47098026..47101291
RNA-Seq ExpressionSpg039785
SyntenySpg039785
Gene Ontology termsGO:0018343 - protein farnesylation (biological process)
GO:0005965 - protein farnesyltransferase complex (cellular component)
GO:0004660 - protein farnesyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001330 - PFTB repeat
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR026872 - Protein farnesyltransferase subunit beta
IPR045089 - Prenyltransferase subunit beta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594044.1 Protein farnesyltransferase subunit beta, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6085.93Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NILDDELV NVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQA LECGFQGRTNKLVDGCY FWQGGVC
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS
        SLL+RLSLDIDEQS++P+AQE GSS D LST   +
Subjt:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS

KAG7017761.1 Protein farnesyltransferase subunit beta [Cucurbita argyrosperma subsp. argyrosperma]2.4e-6085.93Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NILDDELV NVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQA LECGFQGRTNKLVDGCY FWQGGVC
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS
        SLL+RLSLDIDEQS++P+AQE GSS D LST   +
Subjt:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS

XP_022934867.1 protein farnesyltransferase subunit beta [Cucurbita moschata]2.4e-6085.93Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NILDDELV NVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQA LECGFQGRTNKLVDGCY FWQGGVC
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS
        SLL+RLSLDIDEQS++P+AQE GSS D LST   +
Subjt:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS

XP_022982750.1 protein farnesyltransferase subunit beta [Cucurbita maxima]7.0e-6085.19Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NILD+ELV NVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQA LECGFQGRTNKLVDGCY FWQGGVC
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS
        SLL+RLSLDIDEQS++P+AQE GSS D LST   +
Subjt:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS

XP_023527307.1 protein farnesyltransferase subunit beta [Cucurbita pepo subsp. pepo]2.4e-6085.93Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NILDDELV NVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQA LECGFQGRTNKLVDGCY FWQGGVC
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS
        SLL+RLSLDIDEQS++P+AQE GSS D LST   +
Subjt:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS

TrEMBL top hitse value%identityAlignment
A0A0A0LG61 Protein farnesyltransferase subunit beta1.9e-5883.7Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NILDDELV NVGNYI SCQTFEGGIAGEPGSEAHGGYTFCGLA +ILINEV RLDLRSL+DWVVFRQA LECGFQGRTNKLVDGCY FWQGGVC
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS
        SLL+RLSLDIDEQS++P+A+ EGSS D+LST   +
Subjt:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS

A0A1S3B910 Protein farnesyltransferase subunit beta2.4e-5883.7Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NILDDELV NVGNYI SCQTFEGGIAGEPGSEAHGGYTFCGLA +ILINEV RLDLRSL+DWVVFRQA LECGFQGRTNKLVDGCY FWQGGVC
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS
        SLL+RLSLDIDEQS++P+A+ EGSS D LST   +
Subjt:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS

A0A6J1DXE6 Protein farnesyltransferase subunit beta2.9e-5984.44Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NILDDELV NVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQA LECGFQGRTNKLVDGCY FWQGGVC
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS
        S+L+RLSL+ID+ S+R +AQEEGSSI+SL T T +
Subjt:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS

A0A6J1F3Z8 Protein farnesyltransferase subunit beta1.2e-6085.93Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NILDDELV NVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQA LECGFQGRTNKLVDGCY FWQGGVC
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS
        SLL+RLSLDIDEQS++P+AQE GSS D LST   +
Subjt:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS

A0A6J1J3Q0 Protein farnesyltransferase subunit beta3.4e-6085.19Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NILD+ELV NVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLA MILINEV RLDLRSLV+WVVFRQA LECGFQGRTNKLVDGCY FWQGGVC
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS
        SLL+RLSLDIDEQS++P+AQE GSS D LST   +
Subjt:  SLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSS

SwissProt top hitse value%identityAlignment
P49355 Protein farnesyltransferase subunit beta4.6e-3055.24Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VAS++NI+  +L      +I  CQ +EGGI G PG EAHGGYTFCGLAA++++ + + L+L+SL+ WV  RQ   E GFQGR NKLVDGCY FWQ G+ 
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRR
         LL R
Subjt:  SLLRR

Q02293 Protein farnesyltransferase subunit beta4.6e-3055.24Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VAS++NI+  +L      +I  CQ +EGGI G PG EAHGGYTFCGLAA++++ + + L+L+SL+ WV  RQ   E GFQGR NKLVDGCY FWQ G+ 
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRR
         LL R
Subjt:  SLLRR

Q04903 Protein farnesyltransferase subunit beta1.2e-4662.58Show/hide
Query:  EGKSLEDAATSPRAVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKL
        EG+    A  +  +VAS+ NILDDEL+ NVG++ILSCQT+EGG+AGEPGSEAHGGYTFCGLAAMILI EV RLDL  L+DWVVFRQ   ECGFQGRTNKL
Subjt:  EGKSLEDAATSPRAVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKL

Query:  VDGCYLFWQGGVCSLLRRLSLDIDEQSIR-------PEAQEEGSSIDSLSTSTSS
        VDGCY FWQGG  +LL+RL   IDEQ           +A EE   +D  S+  +S
Subjt:  VDGCYLFWQGGVCSLLRRLSLDIDEQSIR-------PEAQEEGSSIDSLSTSTSS

Q38920 Protein farnesyltransferase subunit beta2.2e-4073.58Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NI+DDEL   +G+YILSCQT+EGGI GEPGSEAHGGYT+CGLAAMILINEV RL+L SL++W V RQ  +E GFQGRTNKLVDGCY FWQ   C
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRL
         LL+RL
Subjt:  SLLRRL

Q8K2I1 Protein farnesyltransferase subunit beta4.6e-3055.24Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VAS++NI+  +L      +I  CQ +EGGI G PG EAHGGYTFCGLAA++++ + + L+L+SL+ WV  RQ   E GFQGR NKLVDGCY FWQ G+ 
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRR
         LL R
Subjt:  SLLRR

Arabidopsis top hitse value%identityAlignment
AT2G39550.1 Prenyltransferase family protein2.7e-1741.28Show/hide
Query:  NYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEV-----------QRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVCSLLRRLS
        NYIL+CQ+++GG    PGSE+HGG T+C +A++ L+  +             +D   L++W + RQA+ + GFQGRTNK  D CY FW G V  L+   +
Subjt:  NYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEV-----------QRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVCSLLRRLS

Query:  LDIDEQSIR
        L ID+ ++R
Subjt:  LDIDEQSIR

AT3G12070.1 RAB geranylgeranyl transferase beta subunit 23.4e-1236.96Show/hide
Query:  SISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFW
        SI   LD   V    +YI+SC+  +GG    PG+E+H G  FC + A+ +   + R+D   L  W+  RQ     G  GR  KL D CY +W
Subjt:  SISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFW

AT3G12070.2 RAB geranylgeranyl transferase beta subunit 23.4e-1236.96Show/hide
Query:  SISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFW
        SI   LD   V    +YI+SC+  +GG    PG+E+H G  FC + A+ +   + R+D   L  W+  RQ     G  GR  KL D CY +W
Subjt:  SISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFW

AT5G12210.1 RAB geranylgeranyl transferase beta subunit 19.9e-1236.96Show/hide
Query:  SISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFW
        SI   LD   V     YI+SC+  +GG    PG+E+H G  FC + A+ +   +  +D  SL  W+  RQ     G  GR  KL D CY +W
Subjt:  SISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFW

AT5G40280.1 Prenyltransferase family protein1.6e-4173.58Show/hide
Query:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC
        +VASI NI+DDEL   +G+YILSCQT+EGGI GEPGSEAHGGYT+CGLAAMILINEV RL+L SL++W V RQ  +E GFQGRTNKLVDGCY FWQ   C
Subjt:  AVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECGFQGRTNKLVDGCYLFWQGGVC

Query:  SLLRRL
         LL+RL
Subjt:  SLLRRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGATCTCCCTTTTCGGCGTCACTGCCGCCGTCTTTGCCGTCACCGCCGCCGCAGAAGGTAAATCGTTGGAGGACGCAGCTACTTCTCCCCGTGCCGTTGCCAGTATATC
GAACATCTTGGATGATGAACTAGTTCACAATGTTGGAAACTACATTTTAAGTTGTCAAACTTTTGAAGGTGGCATTGCAGGAGAACCTGGATCTGAAGCTCATGGTGGGT
ACACCTTTTGCGGTTTGGCTGCCATGATTCTGATCAATGAAGTCCAGCGGTTGGACTTGAGGAGTTTAGTTGACTGGGTGGTGTTTCGTCAAGCTGATTTAGAGTGTGGA
TTTCAAGGAAGAACAAATAAGTTGGTCGATGGCTGCTACTTGTTCTGGCAGGGAGGTGTTTGCTCACTGTTACGAAGATTAAGTTTGGATATTGATGAACAATCAATTCG
ACCTGAAGCTCAAGAAGAAGGCTCTTCCATTGACAGCCTATCAACTAGTACGTCATCAGTTCTCTATCTTTTCGTTTTAAGATAA
mRNA sequenceShow/hide mRNA sequence
ACGATCTCCCTTTTCGGCGTCACTGCCGCCGTCTTTGCCGTCACCGCCGCCGCAGAAGGTAAATCGTTGGAGGACGCAGCTACTTCTCCCCGTGCCGTTGCCAGTATATC
GAACATCTTGGATGATGAACTAGTTCACAATGTTGGAAACTACATTTTAAGTTGTCAAACTTTTGAAGGTGGCATTGCAGGAGAACCTGGATCTGAAGCTCATGGTGGGT
ACACCTTTTGCGGTTTGGCTGCCATGATTCTGATCAATGAAGTCCAGCGGTTGGACTTGAGGAGTTTAGTTGACTGGGTGGTGTTTCGTCAAGCTGATTTAGAGTGTGGA
TTTCAAGGAAGAACAAATAAGTTGGTCGATGGCTGCTACTTGTTCTGGCAGGGAGGTGTTTGCTCACTGTTACGAAGATTAAGTTTGGATATTGATGAACAATCAATTCG
ACCTGAAGCTCAAGAAGAAGGCTCTTCCATTGACAGCCTATCAACTAGTACGTCATCAGTTCTCTATCTTTTCGTTTTAAGATAA
Protein sequenceShow/hide protein sequence
TISLFGVTAAVFAVTAAAEGKSLEDAATSPRAVASISNILDDELVHNVGNYILSCQTFEGGIAGEPGSEAHGGYTFCGLAAMILINEVQRLDLRSLVDWVVFRQADLECG
FQGRTNKLVDGCYLFWQGGVCSLLRRLSLDIDEQSIRPEAQEEGSSIDSLSTSTSSVLYLFVLR