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Spg039802 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039802
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSHSP domain-containing protein
Genome locationscaffold10:40922475..40925207
RNA-Seq ExpressionSpg039802
SyntenySpg039802
Gene Ontology termsNA
InterPro domainsIPR008978 - HSP20-like chaperone


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646641.1 hypothetical protein Csa_005322 [Cucumis sativus]4.1e-0956.25Show/hide
Query:  GFSKDQVRITLMEGIKTLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK
        GFSKD++RI L    + ++VTGQK DG FN+TRLNER+ IK +C L  V A +S +TL VTF K
Subjt:  GFSKDQVRITLMEGIKTLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK

KAG6602241.1 hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]8.8e-0436.36Show/hide
Query:  GFSKDQVRITLMEGIKTLLVTGQKQDGFNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRKIDN
        G S++Q++I++   ++T+ +   K++G+N+ R+NE IPI+  CSL++V A+     L +TF K  N
Subjt:  GFSKDQVRITLMEGIKTLLVTGQKQDGFNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRKIDN

KAG7016359.1 hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-0852.86Show/hide
Query:  LQIAREGFSKDQVRITLMEGIKTLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK
        L +   GF K++++ITL    +TL VTGQKQDG FN+ RLNERI I   CSL+ V A + + TL VTF K
Subjt:  LQIAREGFSKDQVRITLMEGIKTLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK

XP_022939359.1 uncharacterized protein LOC111445297 [Cucurbita moschata]6.9e-0954.29Show/hide
Query:  LQIAREGFSKDQVRITLMEGIKTLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK
        L +   GF K+Q++ITL    +TL VTGQKQDG FN+ RLNERI I   CSL+ V A + ++TL VTF K
Subjt:  LQIAREGFSKDQVRITLMEGIKTLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK

TrEMBL top hitse value%identityAlignment
A0A0A0KB53 SHSP domain-containing protein2.0e-0956.25Show/hide
Query:  GFSKDQVRITLMEGIKTLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK
        GFSKD++RI L    + ++VTGQK DG FN+TRLNER+ IK +C L  V A +S +TL VTF K
Subjt:  GFSKDQVRITLMEGIKTLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK

A0A6J1FGX8 uncharacterized protein LOC1114452973.4e-0954.29Show/hide
Query:  LQIAREGFSKDQVRITLMEGIKTLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK
        L +   GF K+Q++ITL    +TL VTGQKQDG FN+ RLNERI I   CSL+ V A + ++TL VTF K
Subjt:  LQIAREGFSKDQVRITLMEGIKTLLVTGQKQDG-FNVTRLNERIPIKSNCSLNDVSANMSEETLSVTFRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACGGGTCAAGACCGAGGCCGAGGCCGAGTCCGACCGACTCCGTTCGGTCCGTGCAACCTCCAACCACTCCGGTTCCGCCTGGTTTGTCCCGAAACGCCTCCAAAT
TCCTAAAAACCCTAGGAGCATGAGCAGGTCACGTCTTCCCCCTCATCTACAAATTGCACGTGAAGGTTTTTCAAAGGATCAAGTGCGAATCACCTTGATGGAAGGAATAA
AGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTTAATGTCACTCGTTTGAATGAGCGCATACCAATTAAATCTAACTGCTCATTAAATGATGTTTCTGCAAACATG
TCTGAAGAAACTCTTTCGGTTACCTTCCGCAAAATAGATAACAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACGGGTCAAGACCGAGGCCGAGGCCGAGTCCGACCGACTCCGTTCGGTCCGTGCAACCTCCAACCACTCCGGTTCCGCCTGGTTTGTCCCGAAACGCCTCCAAAT
TCCTAAAAACCCTAGGAGCATGAGCAGGTCACGTCTTCCCCCTCATCTACAAATTGCACGTGAAGGTTTTTCAAAGGATCAAGTGCGAATCACCTTGATGGAAGGAATAA
AGACTCTTTTAGTTACAGGACAAAAACAAGATGGCTTTAATGTCACTCGTTTGAATGAGCGCATACCAATTAAATCTAACTGCTCATTAAATGATGTTTCTGCAAACATG
TCTGAAGAAACTCTTTCGGTTACCTTCCGCAAAATAGATAACAAATAA
Protein sequenceShow/hide protein sequence
MGRVKTEAEAESDRLRSVRATSNHSGSAWFVPKRLQIPKNPRSMSRSRLPPHLQIAREGFSKDQVRITLMEGIKTLLVTGQKQDGFNVTRLNERIPIKSNCSLNDVSANM
SEETLSVTFRKIDNK