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Spg039813 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039813
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD repeat protein
Genome locationscaffold10:40555473..40558956
RNA-Seq ExpressionSpg039813
SyntenySpg039813
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140944.1 uncharacterized protein LOC101218374 [Cucumis sativus]3.2e-3095.65Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        DSLIKPVTRIIFGVAIIT+LITFLSRDSQGWMKKLNI GNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]1.4e-3097.1Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        DSLIKPVTRIIFGVAIIT+LITFLSRDSQGWMKKLNI GNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]1.3e-2688.73Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFL--SRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        DSLIKPVTRI+F VAIIT+LIT L  SR+SQGWMKKLNI GNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  DSLIKPVTRIIFGVAIITVLITFL--SRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
XP_023518857.1 uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo]9.6e-2787.32Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFL--SRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        DSLIKPVTRI+F VAIIT++IT L  SR+SQGWMKKLNI GNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  DSLIKPVTRIIFGVAIITVLITFL--SRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
XP_038884244.1 uncharacterized protein LOC120075142 [Benincasa hispida]5.5e-3094.2Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        DSLIKPVTRIIFGVA+IT+LITFLSRDSQGWMKK NI GNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
TrEMBL top hitse value%identityAlignment
A0A0A0K9G4 Uncharacterized protein1.5e-3095.65Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        DSLIKPVTRIIFGVAIIT+LITFLSRDSQGWMKKLNI GNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
A0A1S3C3V7 uncharacterized protein LOC1034965716.9e-3197.1Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        DSLIKPVTRIIFGVAIIT+LITFLSRDSQGWMKKLNI GNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
A0A6J1BYH2 uncharacterized protein LOC1110067356.1e-2789.71Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYG
        DSLIKP+TRIIFGVAI+T+LITFLSR+SQG MKKLNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+G
Subjt:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYG
A0A6J1HAT7 uncharacterized protein LOC1114611104.4e-2584.51Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFL--SRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        DSLIKPVT I+F VAIIT++IT L  SR SQGWMK LNI GNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  DSLIKPVTRIIFGVAIITVLITFL--SRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
A0A6J1JTD1 uncharacterized protein LOC1114873206.1e-2788.73Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFL--SRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        DSLIKPVTRI+F VAIIT+LIT L  SR+SQGWMKKLNI GNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  DSLIKPVTRIIFGVAIITVLITFL--SRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71780.1 unknown protein1.4e-2366.67Show/hide
Query:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        DSL+KP+TRII GV I+T+LITFL +D   W+K     G FPPW+LAC+VIVFTR+RKRTRD  KKYGW
Subjt:  DSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCTCCCGTAGGAGGGAGGGGAGAAGAAAGAGACCGAAAGAAAGAGGCACAAGAGAAGCCCGTAGAAGGCACAGGAGTCCAGAACCTAGTGTCCCTGCTCCCATG
GGGAAACGACTGGTTGACTAACAAGGAGAGGAGGCAAGCAATGCCAAACAAACTCATGGATTCCCTGATCAAACCAGTAACCAGGATTATTTTTGGTGTGGCAATTATAA
CCGTTTTGATTACGTTTCTCTCTCGAGACTCACAAGGATGGATGAAGAAATTAAATATCAACGGGAACTTCCCTCCTTGGATTCTTGCTTGTGTCGTTATCGTTTTTACT
CGCTCAAGGAAGAGAACTAGAGACTTGCTGAAAAAGTACGGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCTCCCGTAGGAGGGAGGGGAGAAGAAAGAGACCGAAAGAAAGAGGCACAAGAGAAGCCCGTAGAAGGCACAGGAGTCCAGAACCTAGTGTCCCTGCTCCCATG
GGGAAACGACTGGTTGACTAACAAGGAGAGGAGGCAAGCAATGCCAAACAAACTCATGGATTCCCTGATCAAACCAGTAACCAGGATTATTTTTGGTGTGGCAATTATAA
CCGTTTTGATTACGTTTCTCTCTCGAGACTCACAAGGATGGATGAAGAAATTAAATATCAACGGGAACTTCCCTCCTTGGATTCTTGCTTGTGTCGTTATCGTTTTTACT
CGCTCAAGGAAGAGAACTAGAGACTTGCTGAAAAAGTACGGTTGGTGA
Protein sequenceShow/hide protein sequence
MEAPVGGRGEERDRKKEAQEKPVEGTGVQNLVSLLPWGNDWLTNKERRQAMPNKLMDSLIKPVTRIIFGVAIITVLITFLSRDSQGWMKKLNINGNFPPWILACVVIVFT
RSRKRTRDLLKKYGW