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Spg039863 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039863
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFibroin heavy chain
Genome locationscaffold10:46643411..46643818
RNA-Seq ExpressionSpg039863
SyntenySpg039863
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051071.1 fibroin heavy chain [Cucumis melo var. makuwa]3.9e-3466.67Show/hide
Query:  MKSD-SNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPP--ALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVG
        MKSD S+SPW       NNF T        FS    F  +RRN K+ P  ALVLEAGGGAG+GCG+G GFGLVGG+GHGGASPWNHLHLVFGLG GCGVG
Subjt:  MKSD-SNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPP--ALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVG

Query:  LGLGFGQGIGYGLSFDSLDSYFSDHKSNPKH-NPRLIQ
        LGLG GQG GYG SF+SLDSYFS   S+PKH  P LIQ
Subjt:  LGLGFGQGIGYGLSFDSLDSYFSDHKSNPKH-NPRLIQ

KAG5528001.1 hypothetical protein RHGRI_028808 [Rhododendron griersonianum]3.1e-2353.23Show/hide
Query:  KSDSNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGLG
        K+D NS WKW          +  + V KF         + ++K+  A  L  GGGAGIGCGVG+GFGLVGGVG+GG  PW+HL + FG+G+GCG GLG+G
Subjt:  KSDSNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGLG

Query:  FGQGIGYGLSFDSLDSYFSDHKSN
        FGQGIG GLS DSL SY S+ KS+
Subjt:  FGQGIGYGLSFDSLDSYFSDHKSN

KAG6578355.1 hypothetical protein SDJN03_22803, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5582.96Show/hide
Query:  MKSDSNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGL
        MKSDSNSPWKWNTAI NNF T    D + FSLPNIF  NRRNAKQPP LVL+AGGGAG+GCGVGLGFGLVGG+GHGGASPWNHLHLVFGLGLGCGVGLGL
Subjt:  MKSDSNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGL

Query:  GFGQGIGYGLSFDSLDSYFSDHKSNPKHNPRLIQI
        G G+GIGYG+SFDSLDSYFSDHK NP+  P LIQI
Subjt:  GFGQGIGYGLSFDSLDSYFSDHKSNPKHNPRLIQI

KGN63146.1 hypothetical protein Csa_022245 [Cucumis sativus]1.8e-3463.97Show/hide
Query:  MKSD-SNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLG
        MKSD SNSPW                  N F     F  +RRN K+ PALVLEAGGGAG+GCG+G+GFGLVGG+GH GASPWNHLHLVFGLG GCGVGLG
Subjt:  MKSD-SNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLG

Query:  LGFGQGIGYGLSFDSLDSYFSDHKSNPK-HNPRLIQ
        LG GQG GYG+SF S+DSYFS   SNPK   P LIQ
Subjt:  LGFGQGIGYGLSFDSLDSYFSDHKSNPK-HNPRLIQ

XP_030955948.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic [Quercus lobata]3.1e-2350.74Show/hide
Query:  MKSDSNSPWK-WNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLG
        +K+DS+S W  WN    +N   N       F +    H N + A++   +VL  GGG GIGCGVGLGFGLVGGVG+GG  PWNHL LV G+G+GCGVG+G
Subjt:  MKSDSNSPWK-WNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLG

Query:  LGFGQGIGYGLSFDSLDSYFSDHKSNPKHNPRLIQI
         G+GQGIGYG S +SL+SY S   S+      +I+I
Subjt:  LGFGQGIGYGLSFDSLDSYFSDHKSNPKHNPRLIQI

TrEMBL top hitse value%identityAlignment
A0A0A0LSZ2 Uncharacterized protein8.6e-3563.97Show/hide
Query:  MKSD-SNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLG
        MKSD SNSPW                  N F     F  +RRN K+ PALVLEAGGGAG+GCG+G+GFGLVGG+GH GASPWNHLHLVFGLG GCGVGLG
Subjt:  MKSD-SNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLG

Query:  LGFGQGIGYGLSFDSLDSYFSDHKSNPK-HNPRLIQ
        LG GQG GYG+SF S+DSYFS   SNPK   P LIQ
Subjt:  LGFGQGIGYGLSFDSLDSYFSDHKSNPK-HNPRLIQ

A0A2N9FV55 Uncharacterized protein8.0e-2552.94Show/hide
Query:  MKSDSNSPWK-WNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLG
        +K+DSNS W  WN   GNN     N+   +F +    H NR  A++   +VL  GGG GIGCGVG+GFGLVGG+G+GG  PWNHL LVFG+G+GCGVG+G
Subjt:  MKSDSNSPWK-WNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLG

Query:  LGFGQGIGYGLSFDSLDSYFSDHKSNPKHNPRLIQI
         G+GQGIG G S DSL+SY S   S+      +I+I
Subjt:  LGFGQGIGYGLSFDSLDSYFSDHKSNPKHNPRLIQI

A0A5A7UC28 Fibroin heavy chain1.9e-3466.67Show/hide
Query:  MKSD-SNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPP--ALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVG
        MKSD S+SPW       NNF T        FS    F  +RRN K+ P  ALVLEAGGGAG+GCG+G GFGLVGG+GHGGASPWNHLHLVFGLG GCGVG
Subjt:  MKSD-SNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPP--ALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVG

Query:  LGLGFGQGIGYGLSFDSLDSYFSDHKSNPKH-NPRLIQ
        LGLG GQG GYG SF+SLDSYFS   S+PKH  P LIQ
Subjt:  LGLGFGQGIGYGLSFDSLDSYFSDHKSNPKH-NPRLIQ

A0A5N6QWW9 Uncharacterized protein2.6e-2352Show/hide
Query:  MKSDSNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGL
        +K+DS+S WKWN     N      ++  +F +   F   R  A++   +VL  G G GIGCGVG+GFGLVGG+G+GG  PWNHL +VFG G+GCGVGLG 
Subjt:  MKSDSNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGL

Query:  GFGQGIGYGLSFDSLDSYFSDHKSN
        G+GQGIGYG S +SL+SY S   S+
Subjt:  GFGQGIGYGLSFDSLDSYFSDHKSN

A0A7N2KWH8 Uncharacterized protein1.5e-2350.74Show/hide
Query:  MKSDSNSPWK-WNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLG
        +K+DS+S W  WN    +N   N       F +    H N + A++   +VL  GGG GIGCGVGLGFGLVGGVG+GG  PWNHL LV G+G+GCGVG+G
Subjt:  MKSDSNSPWK-WNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLG

Query:  LGFGQGIGYGLSFDSLDSYFSDHKSNPKHNPRLIQI
         G+GQGIGYG S +SL+SY S   S+      +I+I
Subjt:  LGFGQGIGYGLSFDSLDSYFSDHKSNPKHNPRLIQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66820.1 glycine-rich protein1.7e-1150Show/hide
Query:  GGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGLGFGQGIGYGLSFDSLDSYF
        G G GIGCG G+G GL GG+G G +   +H ++V G G+GCG+G G G+G G+G G SFD +   F
Subjt:  GGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGLGFGQGIGYGLSFDSLDSYF

AT4G10330.1 glycine-rich protein1.2e-0950.77Show/hide
Query:  GAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGLGFGQGIGYGLSFDSLDSYFS
        G G+GCG G G GL+GGVG G   P     L FGLG G G G+G+GFG G+G G ++D   SY++
Subjt:  GAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGLGFGQGIGYGLSFDSLDSYFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCAGACTCCAATTCGCCATGGAAGTGGAACACAGCAATCGGAAACAACTTCCTCACCAACAACAATGACGACGTCAACAAATTCTCTCTCCCCAACATTTTCCA
CCCCAATCGCCGGAACGCTAAGCAACCACCAGCTCTGGTCTTGGAGGCCGGCGGAGGAGCTGGCATAGGCTGCGGTGTCGGACTGGGCTTCGGTCTCGTCGGCGGGGTTG
GCCACGGCGGCGCCTCGCCCTGGAATCACCTTCACCTGGTTTTCGGGCTCGGTCTCGGCTGCGGCGTTGGCTTAGGGCTTGGATTTGGGCAAGGGATTGGCTATGGCTTA
TCCTTCGACTCTCTTGATTCTTATTTCTCTGATCACAAATCAAACCCTAAACATAACCCTCGTCTCATTCAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCAGACTCCAATTCGCCATGGAAGTGGAACACAGCAATCGGAAACAACTTCCTCACCAACAACAATGACGACGTCAACAAATTCTCTCTCCCCAACATTTTCCA
CCCCAATCGCCGGAACGCTAAGCAACCACCAGCTCTGGTCTTGGAGGCCGGCGGAGGAGCTGGCATAGGCTGCGGTGTCGGACTGGGCTTCGGTCTCGTCGGCGGGGTTG
GCCACGGCGGCGCCTCGCCCTGGAATCACCTTCACCTGGTTTTCGGGCTCGGTCTCGGCTGCGGCGTTGGCTTAGGGCTTGGATTTGGGCAAGGGATTGGCTATGGCTTA
TCCTTCGACTCTCTTGATTCTTATTTCTCTGATCACAAATCAAACCCTAAACATAACCCTCGTCTCATTCAGATTTGA
Protein sequenceShow/hide protein sequence
MKSDSNSPWKWNTAIGNNFLTNNNDDVNKFSLPNIFHPNRRNAKQPPALVLEAGGGAGIGCGVGLGFGLVGGVGHGGASPWNHLHLVFGLGLGCGVGLGLGFGQGIGYGL
SFDSLDSYFSDHKSNPKHNPRLIQI