; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039876 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039876
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold10:46550357..46551158
RNA-Seq ExpressionSpg039876
SyntenySpg039876
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC33378.1 hypothetical protein L484_010788 [Morus notabilis]1.6e-1651.45Show/hide
Query:  EEDPPFRAFYELCSMIIDVLKIPPLPIPI-LRSSSSTL-------PPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS
        +ED   R F+EL SMII +LK+PPLPIP  +R+SSS+        P  +SP  FASLF+GISLAL+LFG++T  IGFVLMP+V  L+LLFY   +L  LS
Subjt:  EEDPPFRAFYELCSMIIDVLKIPPLPIPI-LRSSSSTL-------PPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS

Query:  NFARSMLCACTVSSLKDVSAGE-----FLCFFFGNLRA
           RS+L     SS + VSAG+     F CF F  LR+
Subjt:  NFARSMLCACTVSSLKDVSAGE-----FLCFFFGNLRA

KAF5479836.1 hypothetical protein F2P56_000625 [Juglans regia]2.2e-1554.63Show/hide
Query:  EEDPPFRAFYELCSMIIDVLKIPP--LPIPILRS------SSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS
        ++DP  R FYELCSMII +L  PP  LP+P LRS      SSS   P SSPA F SLF+GIS+ L+LFG++T  IGF+LMP+V  L+ LFYF  ++  LS
Subjt:  EEDPPFRAFYELCSMIIDVLKIPP--LPIPILRS------SSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS

Query:  NFARSMLC
           RS+LC
Subjt:  NFARSMLC

KAG8384982.1 hypothetical protein BUALT_Bualt04G0174800 [Buddleja alternifolia]4.5e-1658.65Show/hide
Query:  EEDPPFRAFYELCSMIIDVLKIPPLPI--PILRS--SSSTLPPNS-SPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILSNFA
        EED   R  YELCSMII + + PPLPI  P L S  SSS+ PP+  SPA F SLFIGIS+AL+LFG++T LIGF+LMP+V +L++LFYF  ++S LS   
Subjt:  EEDPPFRAFYELCSMIIDVLKIPPLPI--PILRS--SSSTLPPNS-SPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILSNFA

Query:  RSML
        RS+L
Subjt:  RSML

XP_018853121.1 uncharacterized protein LOC109015095 [Juglans regia]2.2e-1554.63Show/hide
Query:  EEDPPFRAFYELCSMIIDVLKIPP--LPIPILRS------SSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS
        ++DP  R FYELCSMII +L  PP  LP+P LRS      SSS   P SSPA F SLF+GIS+ L+LFG++T  IGF+LMP+V  L+ LFYF  ++  LS
Subjt:  EEDPPFRAFYELCSMIIDVLKIPP--LPIPILRS------SSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS

Query:  NFARSMLC
           RS+LC
Subjt:  NFARSMLC

XP_022134096.1 uncharacterized protein LOC111006451 [Momordica charantia]3.0e-2063.81Show/hide
Query:  RAFYELCSMIIDVLKIPPLPIPILRSSSS-----------TLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILSNFA
        RA Y+L SMI+DVL+IPP PIPIL SS +            L  ++SPAVFASLFI IS+ALILFGTI L+IGF+L+P++  +LLLFYFFNV+SILSNFA
Subjt:  RAFYELCSMIIDVLKIPPLPIPILRSSSS-----------TLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILSNFA

Query:  RSMLC
        RS+LC
Subjt:  RSMLC

TrEMBL top hitse value%identityAlignment
A0A2I4HAE7 uncharacterized protein LOC1090150951.1e-1554.63Show/hide
Query:  EEDPPFRAFYELCSMIIDVLKIPP--LPIPILRS------SSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS
        ++DP  R FYELCSMII +L  PP  LP+P LRS      SSS   P SSPA F SLF+GIS+ L+LFG++T  IGF+LMP+V  L+ LFYF  ++  LS
Subjt:  EEDPPFRAFYELCSMIIDVLKIPP--LPIPILRS------SSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS

Query:  NFARSMLC
           RS+LC
Subjt:  NFARSMLC

A0A5N6QUQ1 Uncharacterized protein1.4e-1550Show/hide
Query:  EEDPPFRAFYELCSMIIDVLKIPPLPIPILRSSSSTLPPNS---SPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILSNFARS
        ++DP     YELCSMI+ +L+ PPLP P    + + + P+S   SPA F SLF+GIS+AL+LFG++T  IGF+LMP+V  L+LLFYF   +SILS F RS
Subjt:  EEDPPFRAFYELCSMIIDVLKIPPLPIPILRSSSSTLPPNS---SPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILSNFARS

Query:  MLCACTVSSLKDVSAGEF
        +L  C V S K+  A  +
Subjt:  MLCACTVSSLKDVSAGEF

A0A6I9UFL0 uncharacterized protein LOC1051774422.7e-1454.21Show/hide
Query:  EEDPPFRAFYELCSMIIDVLKIPPLPI--PILR------SSSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS
        E+D   R  YELCSMII +L+ PPLPI  P L       SSSS+ P   SPA F SLFIGIS+AL+LFG++T +IG +LMP+V  L+LLFYF  ++S LS
Subjt:  EEDPPFRAFYELCSMIIDVLKIPPLPI--PILR------SSSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS

Query:  NFARSML
           R +L
Subjt:  NFARSML

A0A6J1BX03 uncharacterized protein LOC1110064511.5e-2063.81Show/hide
Query:  RAFYELCSMIIDVLKIPPLPIPILRSSSS-----------TLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILSNFA
        RA Y+L SMI+DVL+IPP PIPIL SS +            L  ++SPAVFASLFI IS+ALILFGTI L+IGF+L+P++  +LLLFYFFNV+SILSNFA
Subjt:  RAFYELCSMIIDVLKIPPLPIPILRSSSS-----------TLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILSNFA

Query:  RSMLC
        RS+LC
Subjt:  RSMLC

W9SAM7 Uncharacterized protein7.5e-1751.45Show/hide
Query:  EEDPPFRAFYELCSMIIDVLKIPPLPIPI-LRSSSSTL-------PPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS
        +ED   R F+EL SMII +LK+PPLPIP  +R+SSS+        P  +SP  FASLF+GISLAL+LFG++T  IGFVLMP+V  L+LLFY   +L  LS
Subjt:  EEDPPFRAFYELCSMIIDVLKIPPLPIPI-LRSSSSTL-------PPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILS

Query:  NFARSMLCACTVSSLKDVSAGE-----FLCFFFGNLRA
           RS+L     SS + VSAG+     F CF F  LR+
Subjt:  NFARSMLCACTVSSLKDVSAGE-----FLCFFFGNLRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein1.4e-1041.07Show/hide
Query:  RAFYELCSMIIDVLKIPPLPIPI----------LR--------SSSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVL
        R FY+L S+++++L+ PP+PI +          +R        SSSS    + SP+ FASL +GIS+AL+L G++T  IGF+LMP V  L+L+FY   ++
Subjt:  RAFYELCSMIIDVLKIPPLPIPI----------LR--------SSSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVL

Query:  SILSNFARSMLC
        S +S   RS+LC
Subjt:  SILSNFARSMLC

AT1G27290.2 unknown protein1.4e-1041.07Show/hide
Query:  RAFYELCSMIIDVLKIPPLPIPI----------LR--------SSSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVL
        R FY+L S+++++L+ PP+PI +          +R        SSSS    + SP+ FASL +GIS+AL+L G++T  IGF+LMP V  L+L+FY   ++
Subjt:  RAFYELCSMIIDVLKIPPLPIPI----------LR--------SSSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVL

Query:  SILSNFARSMLC
        S +S   RS+LC
Subjt:  SILSNFARSMLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCATGAAGAGGATCCTCCATTTAGGGCTTTTTACGAGCTCTGCTCCATGATAATCGACGTCCTCAAAATTCCTCCATTACCAATCCCCATCCTCCGATCTTCCTC
CTCGACACTGCCTCCGAATTCCTCTCCGGCGGTCTTCGCCTCGCTCTTCATCGGAATTTCTCTCGCTTTGATTCTCTTCGGAACGATTACGCTCCTCATTGGATTCGTGT
TGATGCCTGTTGTTACGCTCTTGCTCCTTCTCTTCTACTTCTTCAACGTCCTTTCGATTTTGTCCAATTTTGCCCGTTCCATGCTCTGCGCCTGCACCGTCTCCTCGCTA
AAAGATGTTTCCGCCGGTGAATTTCTCTGTTTCTTCTTTGGGAATCTTCGTGCTGCTGCGGCTGCTGAATTCCGCCGCCGCTGCCAACTTAGGGTTGTTGAAGATTCTGA
AGGTCGTTTCATTACCATTACTTATTTAGCCTTTTGGAATTTGATGAAGTTCAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCATGAAGAGGATCCTCCATTTAGGGCTTTTTACGAGCTCTGCTCCATGATAATCGACGTCCTCAAAATTCCTCCATTACCAATCCCCATCCTCCGATCTTCCTC
CTCGACACTGCCTCCGAATTCCTCTCCGGCGGTCTTCGCCTCGCTCTTCATCGGAATTTCTCTCGCTTTGATTCTCTTCGGAACGATTACGCTCCTCATTGGATTCGTGT
TGATGCCTGTTGTTACGCTCTTGCTCCTTCTCTTCTACTTCTTCAACGTCCTTTCGATTTTGTCCAATTTTGCCCGTTCCATGCTCTGCGCCTGCACCGTCTCCTCGCTA
AAAGATGTTTCCGCCGGTGAATTTCTCTGTTTCTTCTTTGGGAATCTTCGTGCTGCTGCGGCTGCTGAATTCCGCCGCCGCTGCCAACTTAGGGTTGTTGAAGATTCTGA
AGGTCGTTTCATTACCATTACTTATTTAGCCTTTTGGAATTTGATGAAGTTCAGGTAG
Protein sequenceShow/hide protein sequence
MSHEEDPPFRAFYELCSMIIDVLKIPPLPIPILRSSSSTLPPNSSPAVFASLFIGISLALILFGTITLLIGFVLMPVVTLLLLLFYFFNVLSILSNFARSMLCACTVSSL
KDVSAGEFLCFFFGNLRAAAAAEFRRRCQLRVVEDSEGRFITITYLAFWNLMKFR