; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039879 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039879
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMetalloendoproteinase 3-MMP-like
Genome locationscaffold10:43607969..43608976
RNA-Seq ExpressionSpg039879
SyntenySpg039879
Gene Ontology termsGO:0030198 - extracellular matrix organization (biological process)
GO:0030574 - collagen catabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002477 - Peptidoglycan binding-like
IPR036365 - PGBD-like superfamily
IPR036366 - PGBD superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037452.1 metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa]1.7e-3066.96Show/hide
Query:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS
        MASKLCLQLF  LL AFI PH+ SAR L  HK SR LFP+HL GSRK D   GIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN S
Subjt:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS

Query:  GILDKETLAQMSKNR
        G+LD+ETL QM++ R
Subjt:  GILDKETLAQMSKNR

XP_004142466.2 metalloendoproteinase 2-MMP [Cucumis sativus]7.8e-2863.79Show/hide
Query:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA
        MA+KLCLQLF  LLLAF+ PH+ SAR L  HKSSR LFP+HL GS K D +  GIH VK YLQRYGY S   +NN   DAFD+ LESA+K YQKF  L  
Subjt:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKNR
        SG+LD+ETL QMS+ R
Subjt:  SGILDKETLAQMSKNR

XP_008458911.1 PREDICTED: metalloendoproteinase 3-MMP-like [Cucumis melo]6.4e-3066.09Show/hide
Query:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS
        M SKLCLQLF  LL AFI PH+ SAR L  HK SR LFP+HL GSRK D   GIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN S
Subjt:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS

Query:  GILDKETLAQMSKNR
        G+LD+ETL QM++ R
Subjt:  GILDKETLAQMSKNR

XP_008458912.1 PREDICTED: metalloendoproteinase 3-MMP-like [Cucumis melo]1.0e-2765.52Show/hide
Query:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA
        MASKLCLQLF  LLLAFI PH+ SAR L  HK S  LFPKHL GS K D +  GIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQKF K+  
Subjt:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKNR
        SG+LD+ETL QMS  R
Subjt:  SGILDKETLAQMSKNR

XP_008458913.1 PREDICTED: metalloendoproteinase 5-MMP-like [Cucumis melo]1.3e-2763.79Show/hide
Query:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNA
        MASKLCLQLF  LLLAF+ PH+ SAR L  HK SR LFP+HL GS K D +  GIH VK YLQRYGY S  N++    D FD  LESA+K YQKF KL  
Subjt:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKNR
        SG+LD+ETL QMSK R
Subjt:  SGILDKETLAQMSKNR

TrEMBL top hitse value%identityAlignment
A0A0A0KS35 ZnMc domain-containing protein3.8e-2863.79Show/hide
Query:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA
        MA+KLCLQLF  LLLAF+ PH+ SAR L  HKSSR LFP+HL GS K D +  GIH VK YLQRYGY S   +NN   DAFD+ LESA+K YQKF  L  
Subjt:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKNR
        SG+LD+ETL QMS+ R
Subjt:  SGILDKETLAQMSKNR

A0A1S3C8Z2 metalloendoproteinase 3-MMP-like3.1e-3066.09Show/hide
Query:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS
        M SKLCLQLF  LL AFI PH+ SAR L  HK SR LFP+HL GSRK D   GIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN S
Subjt:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS

Query:  GILDKETLAQMSKNR
        G+LD+ETL QM++ R
Subjt:  GILDKETLAQMSKNR

A0A1S3C9J1 metalloendoproteinase 3-MMP-like4.9e-2865.52Show/hide
Query:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA
        MASKLCLQLF  LLLAFI PH+ SAR L  HK S  LFPKHL GS K D +  GIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQKF K+  
Subjt:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKNR
        SG+LD+ETL QMS  R
Subjt:  SGILDKETLAQMSKNR

A0A5D3BRA5 Metalloendoproteinase 3-MMP-like4.9e-2865.52Show/hide
Query:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA
        MASKLCLQLF  LLLAFI PH+ SAR L  HK S  LFPKHL GS K D +  GIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQKF K+  
Subjt:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKNR
        SG+LD+ETL QMS  R
Subjt:  SGILDKETLAQMSKNR

A0A5D3BUL7 Metalloendoproteinase 3-MMP-like8.1e-3166.96Show/hide
Query:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS
        MASKLCLQLF  LL AFI PH+ SAR L  HK SR LFP+HL GSRK D   GIH VK YLQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN S
Subjt:  MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTYLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNAS

Query:  GILDKETLAQMSKNR
        G+LD+ETL QM++ R
Subjt:  GILDKETLAQMSKNR

SwissProt top hitse value%identityAlignment
O04529 Metalloendoproteinase 2-MMP1.5e-0537.5Show/hide
Query:  GSRKGDKLGGIHSVKTYLQRYGYLSK--NNSHADAFDEPLESAVKRYQKFFKLNASGILDKETL
        G   G  + G++ +K Y QR+GY+ +  + +  D FD+ L++AV+ YQ  F LN +G LD  T+
Subjt:  GSRKGDKLGGIHSVKTYLQRYGYLSK--NNSHADAFDEPLESAVKRYQKFFKLNASGILDKETL

P29136 Metalloendoproteinase 13.3e-0538.46Show/hide
Query:  GDKLGGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR
        G    G+ +VK Y    GY+       D FD+ L SA+K YQK + LN +G  D  TL Q+   R
Subjt:  GDKLGGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR

Q5XF51 Metalloendoproteinase 3-MMP2.1e-0731.53Show/hide
Query:  LLLLAFIAPHVISARDLDIHKSSRPLFPKHLQ--------------GSRKGDKLGGIHSVKTYLQRYGYLSKNN---SHADAFDEPLESAVKRYQKFFKL
        ++ L F AP  +SA     + +S  + P+ L+              G   G K  G++ +K Y Q +GY+++ N   +  D FD+ L++AV+ YQ+ F+L
Subjt:  LLLLAFIAPHVISARDLDIHKSSRPLFPKHLQ--------------GSRKGDKLGGIHSVKTYLQRYGYLSKNN---SHADAFDEPLESAVKRYQKFFKL

Query:  NASGILDKETL
        N +G+LD+ TL
Subjt:  NASGILDKETL

Q9ZUJ5 Metalloendoproteinase 5-MMP1.1e-0834.48Show/hide
Query:  LFLLLLLAFIAPHVISARDLDIHKSSRPL------------FPKHLQGSRKGDKLGGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNA
        L L +L+ F   + ISA+      S  PL            F K L G   G+ + G+  +K Y +R+GY++   +  D FD+ L+SA+  YQK F L  
Subjt:  LFLLLLLAFIAPHVISARDLDIHKSSRPL------------FPKHLQGSRKGDKLGGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKNR
        +G LD  TL Q+ K R
Subjt:  SGILDKETLAQMSKNR

Arabidopsis top hitse value%identityAlignment
AT1G24140.1 Matrixin family protein1.5e-0831.53Show/hide
Query:  LLLLAFIAPHVISARDLDIHKSSRPLFPKHLQ--------------GSRKGDKLGGIHSVKTYLQRYGYLSKNN---SHADAFDEPLESAVKRYQKFFKL
        ++ L F AP  +SA     + +S  + P+ L+              G   G K  G++ +K Y Q +GY+++ N   +  D FD+ L++AV+ YQ+ F+L
Subjt:  LLLLAFIAPHVISARDLDIHKSSRPLFPKHLQ--------------GSRKGDKLGGIHSVKTYLQRYGYLSKNN---SHADAFDEPLESAVKRYQKFFKL

Query:  NASGILDKETL
        N +G+LD+ TL
Subjt:  NASGILDKETL

AT1G59970.1 Matrixin family protein7.8e-1034.48Show/hide
Query:  LFLLLLLAFIAPHVISARDLDIHKSSRPL------------FPKHLQGSRKGDKLGGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNA
        L L +L+ F   + ISA+      S  PL            F K L G   G+ + G+  +K Y +R+GY++   +  D FD+ L+SA+  YQK F L  
Subjt:  LFLLLLLAFIAPHVISARDLDIHKSSRPL------------FPKHLQGSRKGDKLGGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNA

Query:  SGILDKETLAQMSKNR
        +G LD  TL Q+ K R
Subjt:  SGILDKETLAQMSKNR

AT1G70170.1 matrix metalloproteinase1.1e-0637.5Show/hide
Query:  GSRKGDKLGGIHSVKTYLQRYGYLSK--NNSHADAFDEPLESAVKRYQKFFKLNASGILDKETL
        G   G  + G++ +K Y QR+GY+ +  + +  D FD+ L++AV+ YQ  F LN +G LD  T+
Subjt:  GSRKGDKLGGIHSVKTYLQRYGYLSK--NNSHADAFDEPLESAVKRYQKFFKLNASGILDKETL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTAAATTATGTCTCCAACTCTTCCTCCTCCTCCTCCTCGCCTTCATTGCACCTCACGTGATCTCGGCACGTGATCTTGACATCCACAAATCTTCTCGCCCTCT
ATTTCCCAAGCATCTTCAAGGAAGTCGCAAAGGCGACAAGCTCGGAGGAATCCACAGCGTCAAGACGTACCTACAACGTTACGGTTACTTGAGCAAAAACAATTCCCATG
CAGACGCATTCGACGAGCCCTTGGAATCCGCCGTTAAGAGATACCAAAAATTCTTCAAGCTCAACGCGAGCGGGATTTTGGACAAGGAGACGCTAGCTCAAATGTCGAAG
AATCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTAAATTATGTCTCCAACTCTTCCTCCTCCTCCTCCTCGCCTTCATTGCACCTCACGTGATCTCGGCACGTGATCTTGACATCCACAAATCTTCTCGCCCTCT
ATTTCCCAAGCATCTTCAAGGAAGTCGCAAAGGCGACAAGCTCGGAGGAATCCACAGCGTCAAGACGTACCTACAACGTTACGGTTACTTGAGCAAAAACAATTCCCATG
CAGACGCATTCGACGAGCCCTTGGAATCCGCCGTTAAGAGATACCAAAAATTCTTCAAGCTCAACGCGAGCGGGATTTTGGACAAGGAGACGCTAGCTCAAATGTCGAAG
AATCGATAA
Protein sequenceShow/hide protein sequence
MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSK
NR