; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039889 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039889
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCRC domain-containing protein
Genome locationscaffold10:45258884..45262309
RNA-Seq ExpressionSpg039889
SyntenySpg039889
Gene Ontology termsNA
InterPro domainsIPR005172 - CRC domain
IPR033467 - Tesmin/TSO1-like CXC domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD8065508.1 unnamed protein product [Paramecium sonneborni]2.9e-0532.06Show/hide
Query:  IVNEPQVDLGQQEHQNPPDQQAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKG--NC----------FNHY-----------VNPPLVRMVIKRCR
        I N+ Q D   +  +N  + Q +E++ C C Q +C  R C+CF   R C   C+CK   NC           NH            VN  L   +   C+
Subjt:  IVNEPQVDLGQQEHQNPPDQQAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKG--NC----------FNHY-----------VNPPLVRMVIKRCR

Query:  CKSSKCEHKNCSCLKANKKCNDSCECENCIN
        CKS+ C+ K C C K  + C + C CE+C+N
Subjt:  CKSSKCEHKNCSCLKANKKCNDSCECENCIN

CAD8071654.1 unnamed protein product [Paramecium sonneborni]2.9e-0531.62Show/hide
Query:  KNLRWIVNEPQVDLGQQEHQNPPDQQAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKG--NC----------FNHY-----------VNPPLVRMV
        +N + I N+ Q D   +  +N  + Q +E+  C C Q +C  R C+CF   R C   C+CK   NC           NH            VN  L   +
Subjt:  KNLRWIVNEPQVDLGQQEHQNPPDQQAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKG--NC----------FNHY-----------VNPPLVRMV

Query:  IKRCRCKSSKCEHKNCSCLKANKKCNDSCECENCIN
           C+CKS+ C+ K C C K  + C + C CE+C+N
Subjt:  IKRCRCKSSKCEHKNCSCLKANKKCNDSCECENCIN

CAD8167891.1 unnamed protein product [Paramecium pentaurelia]1.7e-0533.93Show/hide
Query:  QQAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKG--NC----------FNHY-----------VNPPLVRMVIKRCRCKSSKCEHKNCSCLKANKK
        Q+A ++  C C Q  C  R CSCF   R C   C+CK   NC           NH             N  L   +   C+CKS+ C+ K C C K  + 
Subjt:  QQAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKG--NC----------FNHY-----------VNPPLVRMVIKRCRCKSSKCEHKNCSCLKANKK

Query:  CNDSCECENCIN
        C D C CE+C+N
Subjt:  CNDSCECENCIN

XP_001443610.1 hypothetical protein [Paramecium tetraurelia strain d4-2]1.3e-0532.58Show/hide
Query:  QQEHQNPPDQ----------QAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKGNCFN------------HYV------------NPPLVRMVIKRC
        QQ+H  P +Q          +A E+  C C Q  C  R C+CF   R C   C+CK +C N            +YV            N  L   +   C
Subjt:  QQEHQNPPDQ----------QAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKGNCFN------------HYV------------NPPLVRMVIKRC

Query:  RCKSSKCEHKNCSCLKANKKCNDSCECENCIN
        +CKS+ C+ K C CLK  + C D C CE+C+N
Subjt:  RCKSSKCEHKNCSCLKANKKCNDSCECENCIN

XP_020176529.2 copper metallothionein 2 [Aegilops tauschii subsp. strangulata]3.7e-0539.29Show/hide
Query:  CGCKQ-HCRTRSCSCFKGERKCNSSCRCKGNCFNH---YVNPPLVRMVIKRCRCKSSKCEHKNCSCLKANKKCNDSCECENCIN
        C CK   C+TR C+CF+ + +C   C+C G C N+    VN    R   K+C+CK +KC+   C+C  A+  C   C+CE C N
Subjt:  CGCKQ-HCRTRSCSCFKGERKCNSSCRCKGNCFNH---YVNPPLVRMVIKRCRCKSSKCEHKNCSCLKANKKCNDSCECENCIN

TrEMBL top hitse value%identityAlignment
A0A453A2C0 CRC domain-containing protein1.8e-0537.5Show/hide
Query:  CGCKQ-HCRTRSCSCFKGERKCNSSCRCKGNCFNHYVNPPLVRMVI-------KRCRCKSSKCEHKNCSCLKANKKCNDSCECENCIN
        C CK   C+TR C+CF+ + +C   C+C G C N   NP   R ++       K+C+CK +KC+   C+C  A+ +C   C+CE C N
Subjt:  CGCKQ-HCRTRSCSCFKGERKCNSSCRCKGNCFNHYVNPPLVRMVI-------KRCRCKSSKCEHKNCSCLKANKKCNDSCECENCIN

A0BPE7 CRC domain-containing protein3.1e-0533.04Show/hide
Query:  QQEHQNPPDQQAMEMVHCGC-KQHCRTRSCSCFKGERKCNSSCRCKGNCFN--HYV---NPPLVRMVIKR------------CRCKSSKCEHKNCSCLKA
        QQ+ QN P     + + C C K  C  + C CF     C + C+C+G C N   Y+      + ++ I+             C+CK SKC  K C C + 
Subjt:  QQEHQNPPDQQAMEMVHCGC-KQHCRTRSCSCFKGERKCNSSCRCKGNCFN--HYV---NPPLVRMVIKR------------CRCKSSKCEHKNCSCLKA

Query:  NKKCNDSCECENCIN
         +KCND+C+C NC N
Subjt:  NKKCNDSCECENCIN

A0BZ09 CRC domain-containing protein4.0e-0530.43Show/hide
Query:  NPPDQQAMEMVHCGCKQHCRTRSCSCFKGERKCNSSCRCKGNCFNHYVNPPLVRMVIKR-----------------------CRCKSSKCEHKNCSCLKA
        +P +Q  M+  HC  K HC    CSCF   R+C S CRC  +C+N   +   V+  +++                       C+CK +KC    C C   
Subjt:  NPPDQQAMEMVHCGCKQHCRTRSCSCFKGERKCNSSCRCKGNCFNHYVNPPLVRMVIKR-----------------------CRCKSSKCEHKNCSCLKA

Query:  NKKCNDSCECENCIN
         KKC   C+C  C N
Subjt:  NKKCNDSCECENCIN

A0CZJ6 CRC domain-containing protein6.2e-0632.58Show/hide
Query:  QQEHQNPPDQ----------QAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKGNCFN------------HYV------------NPPLVRMVIKRC
        QQ+H  P +Q          +A E+  C C Q  C  R C+CF   R C   C+CK +C N            +YV            N  L   +   C
Subjt:  QQEHQNPPDQ----------QAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKGNCFN------------HYV------------NPPLVRMVIKRC

Query:  RCKSSKCEHKNCSCLKANKKCNDSCECENCIN
        +CKS+ C+ K C CLK  + C D C CE+C+N
Subjt:  RCKSSKCEHKNCSCLKANKKCNDSCECENCIN

A0E8F4 CRC domain-containing protein4.0e-0531.62Show/hide
Query:  QNPPDQQAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKG--NC----------FNHY-----------VNPPLVRMVIKRCRCKSSKCEHKNCSCL
        +N  + + +E+  C C Q +C  R C+CF   R C   C+CK   NC           NH            VN  L   +   C+CKS+ C+ K C C 
Subjt:  QNPPDQQAMEMVHCGCKQ-HCRTRSCSCFKGERKCNSSCRCKG--NC----------FNHY-----------VNPPLVRMVIKRCRCKSSKCEHKNCSCL

Query:  KANKKCNDSCECENCIN
        K  + C + C CE+C+N
Subjt:  KANKKCNDSCECENCIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTGGGTGTGTGTGCGGAGCATGACGCGGAAATCACGTGTGGGTGTGAGTGCGGAGCGTGACGCAGAAATCACGTGTGAGTGGCGCTGCGCATGGCGCGTGATAAT
ACATGTGTTGGGTGGGTTTGCGGAGCGTGACGCAGAAATCACGTGTCAGAATCTTGATTCCTCCAATGAATTTCTTGATTTCTTGGTTGATTTCCATTCCTTTCTTGAAG
ATTCAGTTGCTGATCTCTGTTCCTTTCTTGATCTTCTTGGTCTCTGTTTTGGCGAATTTGATGACCTAAGAACCTTCAACCGACAGCAAGCGTTTGGTGGTGGATTTTGG
GGAAAGAATCTCAGGTGGATTGTAAATGAGCCACAAGTTGATCTCGGGCAACAAGAGCACCAAAATCCTCCTGATCAACAAGCGATGGAAATGGTACATTGTGGATGCAA
ACAACATTGCAGGACTAGGTCCTGCTCATGTTTCAAGGGAGAGAGAAAATGCAACTCGAGTTGTAGGTGTAAGGGTAACTGCTTCAATCATTACGTGAATCCCCCTCTTG
TACGAATGGTCATCAAACGCTGTCGCTGCAAGAGTAGTAAATGCGAGCACAAAAACTGTTCCTGCCTTAAGGCCAACAAAAAATGCAATGACTCCTGCGAATGCGAAAAC
TGTATAAATTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTGGGTGTGTGTGCGGAGCATGACGCGGAAATCACGTGTGGGTGTGAGTGCGGAGCGTGACGCAGAAATCACGTGTGAGTGGCGCTGCGCATGGCGCGTGATAAT
ACATGTGTTGGGTGGGTTTGCGGAGCGTGACGCAGAAATCACGTGTCAGAATCTTGATTCCTCCAATGAATTTCTTGATTTCTTGGTTGATTTCCATTCCTTTCTTGAAG
ATTCAGTTGCTGATCTCTGTTCCTTTCTTGATCTTCTTGGTCTCTGTTTTGGCGAATTTGATGACCTAAGAACCTTCAACCGACAGCAAGCGTTTGGTGGTGGATTTTGG
GGAAAGAATCTCAGGTGGATTGTAAATGAGCCACAAGTTGATCTCGGGCAACAAGAGCACCAAAATCCTCCTGATCAACAAGCGATGGAAATGGTACATTGTGGATGCAA
ACAACATTGCAGGACTAGGTCCTGCTCATGTTTCAAGGGAGAGAGAAAATGCAACTCGAGTTGTAGGTGTAAGGGTAACTGCTTCAATCATTACGTGAATCCCCCTCTTG
TACGAATGGTCATCAAACGCTGTCGCTGCAAGAGTAGTAAATGCGAGCACAAAAACTGTTCCTGCCTTAAGGCCAACAAAAAATGCAATGACTCCTGCGAATGCGAAAAC
TGTATAAATTGGTAG
Protein sequenceShow/hide protein sequence
MCWVCVRSMTRKSRVGVSAERDAEITCEWRCAWRVIIHVLGGFAERDAEITCQNLDSSNEFLDFLVDFHSFLEDSVADLCSFLDLLGLCFGEFDDLRTFNRQQAFGGGFW
GKNLRWIVNEPQVDLGQQEHQNPPDQQAMEMVHCGCKQHCRTRSCSCFKGERKCNSSCRCKGNCFNHYVNPPLVRMVIKRCRCKSSKCEHKNCSCLKANKKCNDSCECEN
CINW