; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039891 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039891
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein-like protein
Genome locationscaffold10:46823798..46824277
RNA-Seq ExpressionSpg039891
SyntenySpg039891
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602699.1 hypothetical protein SDJN03_07932, partial [Cucurbita argyrosperma subsp. sororia]1.3e-7394.97Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKNDKEVRARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED

Query:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         VSD RIEEQEGLLTA N SAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_022134107.1 uncharacterized protein LOC111006461 [Momordica charantia]2.8e-7193.08Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQC VAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDD++DD+NMIPEKN+KEVRARRKLKDLFVSSPP +D
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED

Query:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         VSDRRIEEQEGLLTA+NTSAAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Subjt:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_022960038.1 uncharacterized protein LOC111460905 [Cucurbita moschata]1.0e-7394.97Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKNDKEV+ARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED

Query:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         VSDRRIEEQEGLLTA N SAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_022990769.1 uncharacterized protein LOC111487551 [Cucurbita maxima]1.6e-7496.23Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKNDKEVRARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED

Query:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         VSDRRIEEQEGLLTA NTSAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

XP_023546418.1 uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]3.5e-7495.6Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKNDKEVRARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED

Query:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         VSDRRIEEQEGLLTA N SAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

TrEMBL top hitse value%identityAlignment
A0A6J1BYN1 uncharacterized protein LOC1110064611.3e-7193.08Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQC VAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDD++DD+NMIPEKN+KEVRARRKLKDLFVSSPP +D
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED

Query:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         VSDRRIEEQEGLLTA+NTSAAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Subjt:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1FG66 uncharacterized protein LOC1114451198.7e-7192.5Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDV-DDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNSADPQDV DDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDV-DDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DNVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        D VSDRRIEEQE LLT  NTSAAGIGT S TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DNVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1H7N8 uncharacterized protein LOC1114609054.9e-7494.97Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKNDKEV+ARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED

Query:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         VSDRRIEEQEGLLTA N SAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JSX9 uncharacterized protein LOC1114875517.6e-7596.23Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED
        MATLHKFKLLASQCAV GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SADPQDVDDDDDD+NMIPEKNDKEVRARRKLKDLFVSSPPLED
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLED

Query:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         VSDRRIEEQEGLLTA NTSAAGIGTTSTTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Subjt:  NVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

A0A6J1JYC4 uncharacterized protein LOC1114894142.3e-7193.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDV-DDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
        MATLHKFKLLASQCAVAG PT+SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDV DDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE
Subjt:  MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDV-DDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLE

Query:  DNVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
        D VSDRRIEEQE LLT  NTSAAGIGT S TRRSLRPISATFRYRFLRRAWRPVLV IPE
Subjt:  DNVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown9.1e-2043.68Show/hide
Query:  TLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDK--EVRARRKLKDLFVSSPPLE
        +L KFKLLA+ C+       SPT SPVIHL  RRRKTLR+LL R +DR R P   N+ D               +K DK  ++R+ RKL DLFVSSPP E
Subjt:  TLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDK--EVRARRKLKDLFVSSPPLE

Query:  --------DNVSDRRIEEQEGLLTATNTSAAGIGTTSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE
                D  +   +E +  +     ++ AG G   T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Subjt:  --------DNVSDRRIEEQEGLLTATNTSAAGIGTTSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE

AT1G68430.1 unknown protein3.2e-0935.15Show/hide
Query:  MATLHKFKLLASQCAVAG-SPTRSPT--ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPP
        MATL +FK L +QC VA  SPTRSP+   SP++ L RR++ TL+MLL+     R   Q                  +   + K+V A RKLKDLFVSS  
Subjt:  MATLHKFKLLASQCAVAG-SPTRSPT--ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPP

Query:  LEDNVSD---RRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
         E+   +    + + +E +L A                   P+   F  R L+RAWRP L  I E
Subjt:  LEDNVSD---RRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

AT5G16200.1 50S ribosomal protein-related1.4e-1540.48Show/hide
Query:  MATLHKFKLLAS----QCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRT--DRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVS
        ++ LHKFKL A+    + + AGSPT SPT SPV +L  RRRKTLRML +++   RRR   Q     P      + D N   +K       RRKL++L V+
Subjt:  MATLHKFKLLAS----QCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRT--DRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVS

Query:  --SPPLEDNVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE
          SPP +       I E+   ++  N ++ G G   T RR     S  +FR R LR+ WRPVLV+IPE
Subjt:  --SPPLEDNVSDRRIEEQEGLLTATNTSAAGIGTTSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTAGCCCTACTCGAAGCCCCACCGCTAGCCCCGTCATTCACCTCCGCCGCCGCCGCCG
CAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGACAACTCCGCCGATCCTCAAGATGTCGACGACGACGATGACGACGACAACATGA
TTCCAGAGAAGAACGATAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTTTCGTCGCCGCCGCTCGAGGATAACGTTTCCGATAGGCGAATCGAAGAACAG
GAGGGATTGTTAACGGCGACTAACACCAGCGCCGCTGGAATCGGTACGACCTCCACCACTCGCCGGTCCCTGAGGCCGATTTCGGCGACATTCCGTTACAGATTTCTCCG
GCGAGCTTGGCGGCCGGTGCTCGTCGCCATTCCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCGCCGGTAGCCCTACTCGAAGCCCCACCGCTAGCCCCGTCATTCACCTCCGCCGCCGCCGCCG
CAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGACAACTCCGCCGATCCTCAAGATGTCGACGACGACGATGACGACGACAACATGA
TTCCAGAGAAGAACGATAAGGAGGTCCGAGCCAGGCGGAAACTCAAGGATTTGTTCGTTTCGTCGCCGCCGCTCGAGGATAACGTTTCCGATAGGCGAATCGAAGAACAG
GAGGGATTGTTAACGGCGACTAACACCAGCGCCGCTGGAATCGGTACGACCTCCACCACTCGCCGGTCCCTGAGGCCGATTTCGGCGACATTCCGTTACAGATTTCTCCG
GCGAGCTTGGCGGCCGGTGCTCGTCGCCATTCCCGAGTAG
Protein sequenceShow/hide protein sequence
MATLHKFKLLASQCAVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDNVSDRRIEEQ
EGLLTATNTSAAGIGTTSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE