; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039901 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039901
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCRM domain-containing protein
Genome locationscaffold10:46613708..46617295
RNA-Seq ExpressionSpg039901
SyntenySpg039901
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily
IPR040286 - CRM domain-containing protein At3g25440-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571683.1 putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.2e-15784.8Show/hide
Query:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF
        DSL+G +SLIRNVS LSL NIP+SFGQ SY SCE + SN I++S QESTS+  PP FFF  +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRF
Subjt:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF

Query:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG
        SFGGSS TNGSP KQKKV K KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILTEEEKHY KRTG
Subjt:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG

Query:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
        EKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIV+D+KPNN+IIFYRGKNYV+PEVMSP DTLSKDKALEKYKYE
Subjt:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE

Query:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS
        QSLEHTSQFIEKLEKELEDFQK L QFKRKKE+A +EFM+ S
Subjt:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS

KAG7011409.1 putative CRM domain-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.2e-15885.09Show/hide
Query:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF
        DSL+G +SLIRNVS LSL NIP+SFGQ SY SCE + SN I++S QESTS+  PP FFF  +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRF
Subjt:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF

Query:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG
        SFGGSS TNGSP KQKKV K KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILTEEEKHY KRTG
Subjt:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG

Query:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
        EKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIV+D+KPNN+I+FYRGKNYV+PEVMSPPDTLSKDKALEKYKYE
Subjt:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE

Query:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS
        QSLEHTSQFIEKLEKELEDFQK L QFKRKKE+A +EFMV+S
Subjt:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS

XP_022963469.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata]1.4e-15785.09Show/hide
Query:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF
        DSL+G +SLIRNVS LSL NIP+SFGQ SY SCE + SN I++S QESTS+  PP FFF  +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRF
Subjt:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF

Query:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG
        SFGGSS TNGSP KQKKV K KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILTEEEKHY KRTG
Subjt:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG

Query:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
        EKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIV+D+KPNN+IIFYRGKNYV+PEVMSP DTLSKDKALEKYKYE
Subjt:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE

Query:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS
        QSLEHTSQFIEKLEKELEDFQK L QFKRKKE+A +EFMV+S
Subjt:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS

XP_022967603.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima]1.2e-15985.96Show/hide
Query:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF
        DSL+G +SLIRNVS LSL NIPTSFGQ SY SCE + SN I++S QESTS+  PP FFFT +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRF
Subjt:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF

Query:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG
        SFGGSS TNGSP KQKKV K KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILTEEEKHY KRTG
Subjt:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG

Query:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
        EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIV+D+KPNN+I+FYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
Subjt:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE

Query:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS
        QSLEHTSQF+EKLEKELEDF K L QFKRKKE+A VEFMV+S
Subjt:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS

XP_023511616.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita pepo subsp. pepo]7.1e-15784.8Show/hide
Query:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF
        DSL+G +S+IRNVS LSL NI TSFGQ SYGSCE + SN I++S QESTS+   P FFF  +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRF
Subjt:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF

Query:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG
        SFGGSS TNGSP KQKKV K KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV E YDPEILTEEEKHY KRTG
Subjt:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG

Query:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
        EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIV+D+KPNN+I+FYRGKNYV+PEVMSPPDTLSK+KALEKYKYE
Subjt:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE

Query:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS
        QSLEHTSQFIEKLEKELEDFQK L QFKRKKE+A VEFMV+S
Subjt:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS

TrEMBL top hitse value%identityAlignment
A0A1S3C151 uncharacterized CRM domain-containing protein At3g25440, chloroplastic5.2e-14582.88Show/hide
Query:  SLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFS
        SLFG  SLIRN S LSLL++PTSFGQ S+GSCE + S+ I +S  ESTS   PP    T  RY+  E  GGFK WQ  SVRHFSNA VELKTDSN VRFS
Subjt:  SLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFS

Query:  FGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGE
        FG SS TNGS  KQKKV KTKLSK  KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFE+PKSV E YDPEILTEEEKHY KRTGE
Subjt:  FGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGE

Query:  KKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQ
        KKKNFVLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHEYAEEL+RLSKGIV+D+KPNN+IIFYRGKNYVQPEVMSPPDTLSKDKALEKY+YEQ
Subjt:  KKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQ

Query:  SLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDA
        SLEHTSQFIEKLEKELEDFQK L QFKR+KEDA
Subjt:  SLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDA

A0A5A7SK96 Putative CRM domain-containing protein5.2e-14582.88Show/hide
Query:  SLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFS
        SLFG  SLIRN S LSLL++PTSFGQ S+GSCE + S+ I +S  ESTS   PP    T  RY+  E  GGFK WQ  SVRHFSNA VELKTDSN VRFS
Subjt:  SLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFS

Query:  FGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGE
        FG SS TNGS  KQKKV KTKLSK  KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFE+PKSV E YDPEILTEEEKHY KRTGE
Subjt:  FGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGE

Query:  KKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQ
        KKKNFVLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHEYAEEL+RLSKGIV+D+KPNN+IIFYRGKNYVQPEVMSPPDTLSKDKALEKY+YEQ
Subjt:  KKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQ

Query:  SLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDA
        SLEHTSQFIEKLEKELEDFQK L QFKR+KEDA
Subjt:  SLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDA

A0A6J1CKB1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.1e-15585Show/hide
Query:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF
        +SL G +SLIRNVS  SL NIP SFGQ  YGSCE +RSNHI    QESTS+H PP F F+ RRYN  E+LGGFK WQ  S RHF + AVELKTDSN+VRF
Subjt:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF

Query:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG
        SFG  SVTNGSPPKQKKV KTKLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEV K V E YDPEILTEEEKH+ KRTG
Subjt:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG

Query:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
        EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIVVD+KPNN IIFYRGKNYVQPEVMSPPDTLSKDKA+EKYKYE
Subjt:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE

Query:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMV
        QSLEHTSQFIEKLEKELEDFQK L QFKRKKEDAGVE MV
Subjt:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMV

A0A6J1HK68 uncharacterized CRM domain-containing protein At3g25440, chloroplastic7.0e-15885.09Show/hide
Query:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF
        DSL+G +SLIRNVS LSL NIP+SFGQ SY SCE + SN I++S QESTS+  PP FFF  +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRF
Subjt:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF

Query:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG
        SFGGSS TNGSP KQKKV K KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILTEEEKHY KRTG
Subjt:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG

Query:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
        EKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIV+D+KPNN+IIFYRGKNYV+PEVMSP DTLSKDKALEKYKYE
Subjt:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE

Query:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS
        QSLEHTSQFIEKLEKELEDFQK L QFKRKKE+A +EFMV+S
Subjt:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS

A0A6J1HVJ0 uncharacterized CRM domain-containing protein At3g25440, chloroplastic5.7e-16085.96Show/hide
Query:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF
        DSL+G +SLIRNVS LSL NIPTSFGQ SY SCE + SN I++S QESTS+  PP FFFT +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRF
Subjt:  DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRF

Query:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG
        SFGGSS TNGSP KQKKV K KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV ENYDPEILTEEEKHY KRTG
Subjt:  SFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG

Query:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
        EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIV+D+KPNN+I+FYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
Subjt:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE

Query:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS
        QSLEHTSQF+EKLEKELEDF K L QFKRKKE+A VEFMV+S
Subjt:  QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS

SwissProt top hitse value%identityAlignment
A7XN92 CRM-domain containing factor CFM3, chloroplastic/mitochondrial1.1e-1935.08Show/hide
Query:  RIRYSLEKAKRKEVWLIEKLRKFEVP-KSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE
        ++ + L  A++K       L K E   +   ++  PE +T+EE+  F++ G + K F+LLGRRGVF G + NMHLHWK  E VK++ K      V   A 
Subjt:  RIRYSLEKAKRKEVWLIEKLRKFEVP-KSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE

Query:  ELARLSKGIVVD---VKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVE
         L   S GI+V    V     I+ +RGKNY +P  + P + LSK KAL +    Q  +  S+   KL +++E  +  L Q +  KE    E
Subjt:  ELARLSKGIVVD---VKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVE

Q2R1U8 CRM-domain containing factor CFM3, chloroplastic/mitochondrial7.7e-2136.13Show/hide
Query:  RIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYD-PEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE
        ++ + L+ A++K       L K E      E    PE +T+EE+  F++ G + K F+LLGRRGVF G + NMHLHWK  E VK++ K    G V + A 
Subjt:  RIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYD-PEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE

Query:  ELARLSKGIVVD---VKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVE
         L   S GI+V    V     I+ +RGK+Y +P  + P + LSK KAL +    Q  E  S  I  L + ++  +  L Q +  KE+  VE
Subjt:  ELARLSKGIVVD---VKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVE

Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.3e-4145.26Show/hide
Query:  KTDSNVVRFSFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE
        +T  + +  S   SS    S  K K+  K    K A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S    +DPEILT E
Subjt:  KTDSNVVRFSFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE

Query:  EKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQP--EVMSPPDTLS
        E  Y+ + G K KN+V +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+DV   NTII YRGKNYVQP  E+MSP  TL 
Subjt:  EKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQP--EVMSPPDTLS

Query:  KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ
        + KAL+K K   +L    ++I +LE+EL+  Q
Subjt:  KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ

Q8L7C2 CRM-domain containing factor CFM2, chloroplastic2.2e-2031.91Show/hide
Query:  SFGGSSVTNGSPPKQKKVVKTKLSKTAK--LNELRLYRLKAKKKKTS----PNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKH
        S  G+ +T      + + VK  +   AK   + ++ +++K++++ +         +++  +LEK    E  L + L   E P+    + D E +T +EK+
Subjt:  SFGGSSVTNGSPPKQKKVVKTKLSKTAK--LNELRLYRLKAKKKKTS----PNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKH

Query:  YFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVK---PNNTIIFYRGKNYVQPEVMSPPDTLSKD
          ++ G K K F+LLGRRGVF G + NMHLHWK  E VK+IC        H+ AE L   S GI+V V+       II YRGKNY +P+ + P   LSK 
Subjt:  YFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVK---PNNTIIFYRGKNYVQPEVMSPPDTLSKD

Query:  KALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQ
        +AL++    Q  +     + KL   +E+  ++L +
Subjt:  KALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQ

Q9LT57 CRM-domain containing factor CFM9, mitochondrial2.2e-3642.06Show/hide
Query:  GSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKK
        G S + G   + K   + +      L E+R  R K  KKK   + E R+ Y+L++AK+K   L++KL+K+++P+  +  +DPE+ T E+   FK+ G K 
Subjt:  GSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKK

Query:  KNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSL
        KN+V +G RGVFGGVV NMH+HWK HETV+V C      ++ E A  +ARLS G+V+++    TII +RG+NY QP+ + P +TL+K KAL K ++EQ+L
Subjt:  KNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSL

Query:  EHTSQFIEKLEKEL
        E     I+K E++L
Subjt:  EHTSQFIEKLEKEL

Arabidopsis top hitse value%identityAlignment
AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein4.9e-5554.19Show/hide
Query:  PPKQ-----KKVVKTKLSK------TAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG
        PPK+     KK +K K  K       A   + R   +K KKKK   N E RI+Y LEKAK KE  LIE+L+++EV K       P  +T EE+ Y K+ G
Subjt:  PPKQ-----KKVVKTKLSK------TAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTG

Query:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
        +K+ N+V +GRRGVFGGV+LNMHLHWKKHETVKVIC   KPGQV +YAEELA+LS G+ V++  ++TIIFYRGK YVQP+VMSP DTLSK +A EK KYE
Subjt:  EKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE

Query:  QSLEHTSQFIEKLEKELEDFQKRLTQF
        QSLE    FI   EKELE + + +  +
Subjt:  QSLEHTSQFIEKLEKELEDFQKRLTQF

AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.6e-4245.26Show/hide
Query:  KTDSNVVRFSFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE
        +T  + +  S   SS    S  K K+  K    K A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S    +DPEILT E
Subjt:  KTDSNVVRFSFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE

Query:  EKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQP--EVMSPPDTLS
        E  Y+ + G K KN+V +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+DV   NTII YRGKNYVQP  E+MSP  TL 
Subjt:  EKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQP--EVMSPPDTLS

Query:  KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ
        + KAL+K K   +L    ++I +LE+EL+  Q
Subjt:  KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ

AT3G25440.2 RNA-binding CRS1 / YhbY (CRM) domain protein1.6e-4245.26Show/hide
Query:  KTDSNVVRFSFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE
        +T  + +  S   SS    S  K K+  K    K A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S    +DPEILT E
Subjt:  KTDSNVVRFSFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEE

Query:  EKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQP--EVMSPPDTLS
        E  Y+ + G K KN+V +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+DV   NTII YRGKNYVQP  E+MSP  TL 
Subjt:  EKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQP--EVMSPPDTLS

Query:  KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ
        + KAL+K K   +L    ++I +LE+EL+  Q
Subjt:  KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ

AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.6e-3742.06Show/hide
Query:  GSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKK
        G S + G   + K   + +      L E+R  R K  KKK   + E R+ Y+L++AK+K   L++KL+K+++P+  +  +DPE+ T E+   FK+ G K 
Subjt:  GSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKK

Query:  KNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSL
        KN+V +G RGVFGGVV NMH+HWK HETV+V C      ++ E A  +ARLS G+V+++    TII +RG+NY QP+ + P +TL+K KAL K ++EQ+L
Subjt:  KNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSL

Query:  EHTSQFIEKLEKEL
        E     I+K E++L
Subjt:  EHTSQFIEKLEKEL

AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.8e-10573.19Show/hide
Query:  RRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGG-SSVTNGSPP--KQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEK
        +R+N   Y G F      S R+ SN+ +EL+TD NVVRF+F   SS  N   P  K+KK  + KLS+ AK+NELR YRLKAKKK  SPNPEVRIRY LEK
Subjt:  RRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGG-SSVTNGSPP--KQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEK

Query:  AKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPC-KPGQVHEYAEELARLSKG
        AKRKE WLIEKLRK++VPKS AE YDPE LTEEE+HY KRTGEK+KNFVL+GRRGVFGGVVLN+HLHWKKHETVKVICKPC KPGQVHEYAEELARLSKG
Subjt:  AKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPC-KPGQVHEYAEELARLSKG

Query:  IVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQFKRKKED
        IV+DVKPNNTI+ YRGKNYV+PEVMSP DTLSKDKALEKY+YEQSLEHTS+FIEKLEKELE++ K + + K+KK++
Subjt:  IVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQFKRKKED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTCATTGTTTGGAGTCGTTTCTCTGATTAGAAATGTGTCATATTTATCTTTATTGAACATACCCACATCATTTGGGCAGTTCTCATATGGAAGTTGTGAGCTTGAAAG
AAGTAATCATATTGCAAGGTCTCCCCAGGAATCAACATCTGTACACTCTCCACCTGCCTTCTTTTTCACTAGGAGGAGATATAATGGGTGTGAGTACCTTGGTGGGTTTA
AAAACTGGCAATCTGTTTCTGTTAGGCATTTTAGTAATGCAGCTGTGGAGCTGAAGACAGACAGCAATGTTGTCAGGTTTTCTTTTGGTGGATCTTCTGTTACTAATGGT
TCCCCACCGAAACAAAAAAAGGTGGTCAAAACTAAATTGTCTAAGACGGCCAAATTGAACGAACTCAGACTCTATCGTCTTAAGGCGAAAAAGAAGAAGACATCTCCCAA
TCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGGAAAGAAGTGTGGCTGATTGAGAAGTTGAGGAAATTTGAGGTTCCAAAATCTGTTGCAGAAAATTATG
ATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTTAAGCGTACAGGGGAGAAAAAGAAGAATTTTGTTCTTTTGGGGAGACGAGGAGTCTTTGGTGGAGTTGTTCTC
AATATGCATCTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCAGGGCAGGTTCATGAATATGCTGAAGAGCTTGCTCGATTGAGCAAAGG
CATTGTGGTTGACGTTAAACCCAACAACACCATAATCTTCTATCGGGGGAAGAACTATGTGCAGCCTGAAGTAATGTCGCCTCCAGACACGCTATCAAAAGACAAGGCCT
TGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCGTCTTACTCAATTCAAGAGAAAA
AAGGAAGATGCTGGGGTAGAATTCATGGTTAGTTCATGA
mRNA sequenceShow/hide mRNA sequence
GATTCATTGTTTGGAGTCGTTTCTCTGATTAGAAATGTGTCATATTTATCTTTATTGAACATACCCACATCATTTGGGCAGTTCTCATATGGAAGTTGTGAGCTTGAAAG
AAGTAATCATATTGCAAGGTCTCCCCAGGAATCAACATCTGTACACTCTCCACCTGCCTTCTTTTTCACTAGGAGGAGATATAATGGGTGTGAGTACCTTGGTGGGTTTA
AAAACTGGCAATCTGTTTCTGTTAGGCATTTTAGTAATGCAGCTGTGGAGCTGAAGACAGACAGCAATGTTGTCAGGTTTTCTTTTGGTGGATCTTCTGTTACTAATGGT
TCCCCACCGAAACAAAAAAAGGTGGTCAAAACTAAATTGTCTAAGACGGCCAAATTGAACGAACTCAGACTCTATCGTCTTAAGGCGAAAAAGAAGAAGACATCTCCCAA
TCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGGAAAGAAGTGTGGCTGATTGAGAAGTTGAGGAAATTTGAGGTTCCAAAATCTGTTGCAGAAAATTATG
ATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTTAAGCGTACAGGGGAGAAAAAGAAGAATTTTGTTCTTTTGGGGAGACGAGGAGTCTTTGGTGGAGTTGTTCTC
AATATGCATCTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCAGGGCAGGTTCATGAATATGCTGAAGAGCTTGCTCGATTGAGCAAAGG
CATTGTGGTTGACGTTAAACCCAACAACACCATAATCTTCTATCGGGGGAAGAACTATGTGCAGCCTGAAGTAATGTCGCCTCCAGACACGCTATCAAAAGACAAGGCCT
TGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCGTCTTACTCAATTCAAGAGAAAA
AAGGAAGATGCTGGGGTAGAATTCATGGTTAGTTCATGA
Protein sequenceShow/hide protein sequence
DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNG
SPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVL
NMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQFKRK
KEDAGVEFMVSS