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Spg039953 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039953
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein SPIRAL1-like 3
Genome locationscaffold10:44726873..44729439
RNA-Seq ExpressionSpg039953
SyntenySpg039953
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602534.1 putative methylesterase 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4891.74Show/hide
Query:  GETKGLKMGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSL
        GETKGLKMGRGVSSGGGQSSL YLFGGGEPANNVQAS+KPNGSSQPTSSTSQP DK IPAGIPGN TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSL
Subjt:  GETKGLKMGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSL

Query:  DFLFGSGRN
        DFLFG+G++
Subjt:  DFLFGSGRN

KAG7033210.1 Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]3.0e-4390.2Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG
        MGRGVSSGGGQSSL YLFGGGEPANNVQAS+K NGSSQPTSSTSQP DK IPAGIPGN TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+G
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG

Query:  RN
        ++
Subjt:  RN

XP_022134514.1 protein SPIRAL1-like 3 [Momordica charantia]8.7e-4388.68Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKI----PAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSL YLFGGGEPANNVQASQKPNGSSQPTSST+Q TDK I    PAGIP N TNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKI----PAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGSGRN
        FG+GR+
Subjt:  FGSGRN

XP_022954496.1 protein SPIRAL1-like 3 [Cucurbita moschata]3.5e-4491.18Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG
        MGRGVSSGGGQSSL YLFGGGEPANNVQAS+KPNGSSQPTSSTSQP DK IPAGIPGN TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+G
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG

Query:  RN
        ++
Subjt:  RN

XP_038889735.1 protein SPIRAL1-like 1 [Benincasa hispida]1.1e-3783.33Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG
        M RGVSSGGGQSSL YLFG GEPAN+VQ SQK  GSSQ  +STS  TDK+ PAGIPG+LTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+G
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG

Query:  RN
        R+
Subjt:  RN

TrEMBL top hitse value%identityAlignment
A0A067JWW4 Uncharacterized protein2.6e-3276.47Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG
        MGRGVS+GGGQSSL YLFG GE ANN +A++ P  SSQ     SQP DK+IPAGI GNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSL +LFG  
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG

Query:  RN
         N
Subjt:  RN

A0A5C7HMB5 Uncharacterized protein4.0e-3373.39Show/hide
Query:  LKMGRGVSSGGGQSSLNYLFGGGEPANNVQASQK-----PNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSL
        L+MGRGVS+GGGQSSL YLFG GE ANNVQA Q       N   Q  S  SQP DK+IPAG+ GNLTNNY RADGQNCGNFITDRPSTKVHAAPGGGSSL
Subjt:  LKMGRGVSSGGGQSSLNYLFGGGEPANNVQASQK-----PNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSL

Query:  DFLFGSGRN
         +LFG G N
Subjt:  DFLFGSGRN

A0A6J1BYY1 protein SPIRAL1-like 34.2e-4388.68Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKI----PAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSL YLFGGGEPANNVQASQKPNGSSQPTSST+Q TDK I    PAGIP N TNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKI----PAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGSGRN
        FG+GR+
Subjt:  FGSGRN

A0A6J1GRA9 protein SPIRAL1-like 31.7e-4491.18Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG
        MGRGVSSGGGQSSL YLFGGGEPANNVQAS+KPNGSSQPTSSTSQP DK IPAGIPGN TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+G
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG

Query:  RN
        ++
Subjt:  RN

A0A6J1JRI1 protein SPIRAL1-like 31.7e-4491.18Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG
        MGRGVSSGGGQSSL YLFGGGEPANNVQAS+KPNGSSQPTSSTSQP DK IPAGIPGN TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG+G
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG

Query:  RN
        ++
Subjt:  RN

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 12.2e-2560Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGE-PANNVQASQKPNGSSQPTSSTSQP---------TDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGG
        MGRGVS GGGQSSL YLFG GE P   +  +  P+  + P S+   P           K+IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGG
Subjt:  MGRGVSSGGGQSSLNYLFGGGE-PANNVQASQKPNGSSQPTSSTSQP---------TDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGG

Query:  SSLDFLFGSG
        SSLD+LFG G
Subjt:  SSLDFLFGSG

Q2QQ99 Protein SPIRAL1-like 39.1e-2762.75Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG
        MGRGVSSGGGQSSL YLFGGGE     ++++KP    +P  S+S    K+IPAGI  +  NNY RA+GQNCGNF+TDRPSTKV AAPGGGSSLD+LF   
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGSG

Query:  RN
        ++
Subjt:  RN

Q2R0W8 Protein SPIRAL1-like 25.5e-2457.27Show/hide
Query:  GRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPT-------------SSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPG
        GRGVSSGGGQSSL YLFGGGE A   +A        + T             S ++    K+IPAGI     NNY+RA GQNCGNF+TDRPSTKVHAAPG
Subjt:  GRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPT-------------SSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPG

Query:  GGSSLDFLFG
        GGSSL +LFG
Subjt:  GGSSLDFLFG

Q9LE54 Protein SPIRAL1-like 23.8e-2557.27Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGE-----PANNVQASQKPNGSSQPT---SSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSS
        MGRGVS+GGGQSSL YLFG GE       N   A  + +  + PT   ++ +  + K++PAG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSS
Subjt:  MGRGVSSGGGQSSLNYLFGGGE-----PANNVQASQKPNGSSQPT---SSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSS

Query:  LDFLFGSGRN
        LD+LFG G N
Subjt:  LDFLFGSGRN

Q9LF22 Protein SPIRAL1-like 42.6e-2150.83Show/hide
Query:  RGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLT----------------------NNYYRADGQNCGNFITDRPS
        RGV+SGGG+SSL YLFG GE   +V    KPN  +  T++T+  T      G P   T                      NNYYR+DGQNCGNF+T+RPS
Subjt:  RGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLT----------------------NNYYRADGQNCGNFITDRPS

Query:  TKVHAAPGGGSSLDFLFGSG
        TKVHAAPGGGSSL +LFGSG
Subjt:  TKVHAAPGGGSSLDFLFGSG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.6e-2660Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGE-PANNVQASQKPNGSSQPTSSTSQP---------TDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGG
        MGRGVS GGGQSSL YLFG GE P   +  +  P+  + P S+   P           K+IPAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGG
Subjt:  MGRGVSSGGGQSSLNYLFGGGE-PANNVQASQKPNGSSQPTSSTSQP---------TDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGG

Query:  SSLDFLFGSG
        SSLD+LFG G
Subjt:  SSLDFLFGSG

AT1G69230.1 SPIRAL1-like22.7e-2657.27Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGE-----PANNVQASQKPNGSSQPT---SSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSS
        MGRGVS+GGGQSSL YLFG GE       N   A  + +  + PT   ++ +  + K++PAG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSS
Subjt:  MGRGVSSGGGQSSLNYLFGGGE-----PANNVQASQKPNGSSQPT---SSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSS

Query:  LDFLFGSGRN
        LD+LFG G N
Subjt:  LDFLFGSGRN

AT1G69230.2 SPIRAL1-like22.7e-2657.27Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGE-----PANNVQASQKPNGSSQPT---SSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSS
        MGRGVS+GGGQSSL YLFG GE       N   A  + +  + PT   ++ +  + K++PAG+  N  NNY RA+GQN GNFITDRPSTKVH+APGGGSS
Subjt:  MGRGVSSGGGQSSLNYLFGGGE-----PANNVQASQKPNGSSQPT---SSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSS

Query:  LDFLFGSGRN
        LD+LFG G N
Subjt:  LDFLFGSGRN

AT2G03680.1 spiral11.8e-2255Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKP------NGSSQP----------TSSTS-QPTD--KKIPAGIPGNLTNNYYRADGQNCGNFITDRPST
        MGRG S GGGQSSL+YLFGG  PA     + +P      NG + P          T++TS +P +  K+IPAGI     NNY RA+GQN GNF+TDRPST
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKP------NGSSQP----------TSSTS-QPTD--KKIPAGIPGNLTNNYYRADGQNCGNFITDRPST

Query:  KVHAAPGGGSSLDFLFGSGR
        KVHAAPGGGSSLD+LF  G+
Subjt:  KVHAAPGGGSSLDFLFGSGR

AT2G03680.2 spiral11.8e-2255Show/hide
Query:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKP------NGSSQP----------TSSTS-QPTD--KKIPAGIPGNLTNNYYRADGQNCGNFITDRPST
        MGRG S GGGQSSL+YLFGG  PA     + +P      NG + P          T++TS +P +  K+IPAGI     NNY RA+GQN GNF+TDRPST
Subjt:  MGRGVSSGGGQSSLNYLFGGGEPANNVQASQKP------NGSSQP----------TSSTS-QPTD--KKIPAGIPGNLTNNYYRADGQNCGNFITDRPST

Query:  KVHAAPGGGSSLDFLFGSGR
        KVHAAPGGGSSLD+LF  G+
Subjt:  KVHAAPGGGSSLDFLFGSGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAATGATATAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGAACTACCTGTTTGGAGGTGGAGAACCAGCCAA
CAATGTGCAAGCTTCTCAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACCTCGCAACCTACTGATAAGAAGATACCTGCTGGCATTCCAGGGAATCTTACTAACA
ATTACTATCGAGCGGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCATGCTGCACCTGGCGGTGGATCTTCTCTGGATTTCCTTTTCGGA
AGTGGTAGGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAATGATATAGGAGAAACAAAAGGCTTGAAAATGGGTCGTGGAGTTAGCAGCGGCGGTGGACAGAGCTCCTTGAACTACCTGTTTGGAGGTGGAGAACCAGCCAA
CAATGTGCAAGCTTCTCAGAAACCCAATGGATCTTCTCAGCCTACCTCTTCTACCTCGCAACCTACTGATAAGAAGATACCTGCTGGCATTCCAGGGAATCTTACTAACA
ATTACTATCGAGCGGATGGACAGAACTGTGGCAACTTTATCACGGATCGTCCATCGACCAAGGTTCATGCTGCACCTGGCGGTGGATCTTCTCTGGATTTCCTTTTCGGA
AGTGGTAGGAACTAA
Protein sequenceShow/hide protein sequence
MVNDIGETKGLKMGRGVSSGGGQSSLNYLFGGGEPANNVQASQKPNGSSQPTSSTSQPTDKKIPAGIPGNLTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFG
SGRN