; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039955 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039955
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold10:45329613..45333511
RNA-Seq ExpressionSpg039955
SyntenySpg039955
Gene Ontology termsGO:0005622 - intracellular (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN62833.1 hypothetical protein VITISV_012130 [Vitis vinifera]1.3e-1523.88Show/hide
Query:  YTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQ--KKFKS----W---------YLDHLFIHCGFAKKVWNFVANLLGIS
        ++  S F  +++ S  +    +K +W  K   KVK   W +A+  +NT+DK+Q  + +K+    W          +DHLF+HC     +W+ + NL+G+ 
Subjt:  YTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQ--KKFKS----W---------YLDHLFIHCGFAKKVWNFVANLLGIS

Query:  FCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDPPWFSKVS---QASLKIYLHS
        +  P  I+D L           + KI+   A    +W +W+ERN+R FEDK  + +   D ++  +S W S  +   G P    +++   +  L+  +H 
Subjt:  FCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDPPWFSKVS---QASLKIYLHS

Query:  IDIEFTVAVTNVDRAIPPALKLGGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFDSFCSNVKYS--ASWWCTKHRKFFCNYNLSMI
        ++ E       +D                 S      +    + ++R  F D  +  D      KY     W   K +K FCN+ L ++
Subjt:  IDIEFTVAVTNVDRAIPPALKLGGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFDSFCSNVKYS--ASWWCTKHRKFFCNYNLSMI

ONI36148.1 hypothetical protein PRUPE_1G572100 [Prunus persica]1.5e-1633.55Show/hide
Query:  LIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGISFCLPNKIDDWLSEGLAAWNLREK
        L+WK KS  KVKVF+W +A   +NT D +Q+K    YL               DHLF+HC F+  +W  +   +G  + +P    D+L      W L + 
Subjt:  LIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGISFCLPNKIDDWLSEGLAAWNLREK

Query:  AKIMAGCAFRATLWPLWKERNSRTFED-KSPSLDFFCDNVQNTASWWISLHK
           + GC   +  W +W ERN R FED K   +    D V+  A++W S+ K
Subjt:  AKIMAGCAFRATLWPLWKERNSRTFED-KSPSLDFFCDNVQNTASWWISLHK

RVW15141.1 putative ribonuclease H protein [Vitis vinifera]3.8e-1529.83Show/hide
Query:  MYTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGI
        ++T  S F  +++ S   +   +KL+W  +   K+K F+W +A++ +NT+D +Q +     L               DHLF+HC     +W+ +  L  I
Subjt:  MYTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGI

Query:  SFCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDP
         +  P  I D LS     +   ++  I+   A  A LW +W+ERN+R FEDKS + +   D +   AS W+S  K   G P
Subjt:  SFCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDP

TYK31299.1 protein FAM91A1 [Cucumis melo var. makuwa]4.0e-1743.55Show/hide
Query:  YTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGIS
        ++   +F KMT  + K N ++  LIWK K  KKVK FLWSLAYRSLN  +K+Q+KF +  L               DHLF+HC FA K WN + +L  + 
Subjt:  YTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGIS

Query:  FCLPNKIDDWLSEGLAAWNLREKA
         CLP KIDD + +GL   +   KA
Subjt:  FCLPNKIDDWLSEGLAAWNLREKA

VVA21329.1 Hypothetical predicted protein [Prunus dulcis]1.0e-1533.55Show/hide
Query:  LIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGISFCLPNKIDDWLSEGLAAWNLREK
        L+WK KS  KVKVF+W +A   +NT D +Q+K    YL               DHLF+HC F+  +W  +   +G  + +     D+L      W L + 
Subjt:  LIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGISFCLPNKIDDWLSEGLAAWNLREK

Query:  AKIMAGCAFRATLWPLWKERNSRTFED-KSPSLDFFCDNVQNTASWWISLHK
           + GC   +  W +W ERN R FED K   L    D V+  A++W S+ K
Subjt:  AKIMAGCAFRATLWPLWKERNSRTFED-KSPSLDFFCDNVQNTASWWISLHK

TrEMBL top hitse value%identityAlignment
A0A438BVX7 Putative ribonuclease H protein1.8e-1529.83Show/hide
Query:  MYTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGI
        ++T  S F  +++ S   +   +KL+W  +   K+K F+W +A++ +NT+D +Q +     L               DHLF+HC     +W+ +  L  I
Subjt:  MYTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGI

Query:  SFCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDP
         +  P  I D LS     +   ++  I+   A  A LW +W+ERN+R FEDKS + +   D +   AS W+S  K   G P
Subjt:  SFCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDP

A0A438GPP0 Putative ribonuclease H protein4.1e-1528.18Show/hide
Query:  MYTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQ--KKFKSW-------------YLDHLFIHCGFAKKVWNFVANLLGI
        ++T  S F  +++ S   +   +KL+W  +   K+K F+W +A++ +NT+D +Q  + +K+               +DHLF+HC     +W+ +  L  I
Subjt:  MYTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQ--KKFKSW-------------YLDHLFIHCGFAKKVWNFVANLLGI

Query:  SFCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDP
         +  P  + D +S     +   ++  ++   A  A LW +W+ERN+R FEDKS + +   D +   AS W+S  K   G P
Subjt:  SFCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDP

A0A5D3E632 Protein FAM91A12.0e-1743.55Show/hide
Query:  YTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGIS
        ++   +F KMT  + K N ++  LIWK K  KKVK FLWSLAYRSLN  +K+Q+KF +  L               DHLF+HC FA K WN + +L  + 
Subjt:  YTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYL---------------DHLFIHCGFAKKVWNFVANLLGIS

Query:  FCLPNKIDDWLSEGLAAWNLREKA
         CLP KIDD + +GL   +   KA
Subjt:  FCLPNKIDDWLSEGLAAWNLREKA

A5AUH3 Reverse transcriptase domain-containing protein6.3e-1623.88Show/hide
Query:  YTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQ--KKFKS----W---------YLDHLFIHCGFAKKVWNFVANLLGIS
        ++  S F  +++ S  +    +K +W  K   KVK   W +A+  +NT+DK+Q  + +K+    W          +DHLF+HC     +W+ + NL+G+ 
Subjt:  YTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQ--KKFKS----W---------YLDHLFIHCGFAKKVWNFVANLLGIS

Query:  FCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDPPWFSKVS---QASLKIYLHS
        +  P  I+D L           + KI+   A    +W +W+ERN+R FEDK  + +   D ++  +S W S  +   G P    +++   +  L+  +H 
Subjt:  FCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDPPWFSKVS---QASLKIYLHS

Query:  IDIEFTVAVTNVDRAIPPALKLGGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFDSFCSNVKYS--ASWWCTKHRKFFCNYNLSMI
        ++ E       +D                 S      +    + ++R  F D  +  D      KY     W   K +K FCN+ L ++
Subjt:  IDIEFTVAVTNVDRAIPPALKLGGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFDSFCSNVKYS--ASWWCTKHRKFFCNYNLSMI

A5BPI6 Uncharacterized protein4.1e-1528.18Show/hide
Query:  MYTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQ--KKFKSW-------------YLDHLFIHCGFAKKVWNFVANLLGI
        ++T  S F  +++ S   +   +KL+W  +   K+K F+W +A++ +NT+D +Q  + +K+               +DHLF+HC     +W+ +  L  I
Subjt:  MYTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQ--KKFKSW-------------YLDHLFIHCGFAKKVWNFVANLLGI

Query:  SFCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDP
         +  P  + D +S     +   ++  ++   A  A LW +W+ERN+R FEDKS + +   D +   AS W+S  K   G P
Subjt:  SFCLPNKIDDWLSEGLAAWNLREKAKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25270.1 Ribonuclease H-like superfamily protein1.5e-0628.08Show/hide
Query:  IWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKF------------KSWYLDHLFIHCGFAKKVWNFVA----NLLGISFCLPNKIDDWLSEGLAAWNLREK
        IWK K+  K+K FLW L   +L T D ++++             +     HLF  C +A++VW         L      +  K++  LS  LA  N + +
Subjt:  IWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKF------------KSWYLDHLFIHCGFAKKVWNFVA----NLLGISFCLPNKIDDWLSEGLAAWNLREK

Query:  AKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWW
           +A       LW LWK RN   F+ KS S        +N    W
Subjt:  AKIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACACGGCAACATCCATGTTTCAGAAGATGACCAAATTCTCGCCTAAAATCAATCAGACTTCAAGTAAACTGATCTGGAAACATAAAAGCCAGAAGAAAGTCAAGGT
GTTCTTGTGGTCTTTAGCCTACCGTAGCCTAAATACTGATGATAAAATCCAAAAGAAGTTCAAAAGCTGGTACTTGGATCATCTTTTTATCCATTGTGGTTTTGCGAAGA
AAGTGTGGAACTTTGTGGCTAATCTTCTGGGTATCTCCTTCTGTTTACCCAATAAAATTGATGATTGGTTAAGTGAAGGGCTGGCTGCATGGAACTTAAGGGAAAAGGCC
AAGATTATGGCTGGTTGTGCCTTTAGGGCTACTCTATGGCCTTTGTGGAAGGAAAGGAACTCTAGAACCTTTGAAGACAAATCGCCTAGCTTAGATTTTTTCTGTGACAA
TGTTCAAAATACAGCTTCTTGGTGGATATCTCTACACAAAAAATCTTTTGGTGATCCACCTTGGTTCAGTAAGGTTTCACAGGCATCCTTGAAAATTTATCTCCACAGCA
TAGATATTGAATTCACTGTTGCCGTAACTAATGTTGACAGAGCCATCCCTCCTGCACTGAAGCTTGGAGGCAGAGGAAAGATTTTGTGGAGTATGGCTGCTAGAGCTTTG
ATGTGGAACCTTTGGCTTGAGAGAAATCGTCGGGTCTTTGAAGATAAGAGCTCTCCGTTTGATTCCTTTTGTTCTAATGTTAAATATTCTGCTTCTTGGTGGTGTACAAA
GCACAGGAAATTCTTTTGTAATTACAACTTGTCCATGATAGTTTCAAATTGGACTGCCTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACACGGCAACATCCATGTTTCAGAAGATGACCAAATTCTCGCCTAAAATCAATCAGACTTCAAGTAAACTGATCTGGAAACATAAAAGCCAGAAGAAAGTCAAGGT
GTTCTTGTGGTCTTTAGCCTACCGTAGCCTAAATACTGATGATAAAATCCAAAAGAAGTTCAAAAGCTGGTACTTGGATCATCTTTTTATCCATTGTGGTTTTGCGAAGA
AAGTGTGGAACTTTGTGGCTAATCTTCTGGGTATCTCCTTCTGTTTACCCAATAAAATTGATGATTGGTTAAGTGAAGGGCTGGCTGCATGGAACTTAAGGGAAAAGGCC
AAGATTATGGCTGGTTGTGCCTTTAGGGCTACTCTATGGCCTTTGTGGAAGGAAAGGAACTCTAGAACCTTTGAAGACAAATCGCCTAGCTTAGATTTTTTCTGTGACAA
TGTTCAAAATACAGCTTCTTGGTGGATATCTCTACACAAAAAATCTTTTGGTGATCCACCTTGGTTCAGTAAGGTTTCACAGGCATCCTTGAAAATTTATCTCCACAGCA
TAGATATTGAATTCACTGTTGCCGTAACTAATGTTGACAGAGCCATCCCTCCTGCACTGAAGCTTGGAGGCAGAGGAAAGATTTTGTGGAGTATGGCTGCTAGAGCTTTG
ATGTGGAACCTTTGGCTTGAGAGAAATCGTCGGGTCTTTGAAGATAAGAGCTCTCCGTTTGATTCCTTTTGTTCTAATGTTAAATATTCTGCTTCTTGGTGGTGTACAAA
GCACAGGAAATTCTTTTGTAATTACAACTTGTCCATGATAGTTTCAAATTGGACTGCCTTTGTTTAG
Protein sequenceShow/hide protein sequence
MYTATSMFQKMTKFSPKINQTSSKLIWKHKSQKKVKVFLWSLAYRSLNTDDKIQKKFKSWYLDHLFIHCGFAKKVWNFVANLLGISFCLPNKIDDWLSEGLAAWNLREKA
KIMAGCAFRATLWPLWKERNSRTFEDKSPSLDFFCDNVQNTASWWISLHKKSFGDPPWFSKVSQASLKIYLHSIDIEFTVAVTNVDRAIPPALKLGGRGKILWSMAARAL
MWNLWLERNRRVFEDKSSPFDSFCSNVKYSASWWCTKHRKFFCNYNLSMIVSNWTAFV