; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg039973 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg039973
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor bHLH112-like isoform X2
Genome locationscaffold10:42593323..42599254
RNA-Seq ExpressionSpg039973
SyntenySpg039973
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578716.1 Transcription factor basic helix-loop-helix 154, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6864.04Show/hide
Query:  QVVIQESELLLGAAE--SGFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDV
        ++V QESEL+LGAAE   GFCLESKLFNNDGQLKG GFTIPCQHP +YQPGC+AS SMTENVSPQ + F  K SFLQNES+AKKREFFAQKG+Q APYD+
Subjt:  QVVIQESELLLGAAE--SGFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDV

Query:  AGDNKRMKVSALEQGSCYLSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQ
        AGDNKRMK+                     + P RRSQRLSDKITALQKLVSPYGK                      NLLQMQSSSY++LNPQG QQKQ
Subjt:  AGDNKRMKVSALEQGSCYLSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQ

Query:  GNLRSEGLCLVPVTYSLKIPINQDIIMI
        GNLRSEGLC+VPVT++ KI +N+DI ++
Subjt:  GNLRSEGLCLVPVTYSLKIPINQDIIMI

XP_022134418.1 transcription factor bHLH112-like isoform X2 [Momordica charantia]5.0e-6771.08Show/hide
Query:  FCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCYL
        FCLESKLFNNDGQLK GGFTIPCQ P SYQPGCSASISM ++VS Q ILFP K SFLQNESNAKKREFFAQKGL+T+P DVAGDNKRMKV+ALEQG  YL
Subjt:  FCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCYL

Query:  SQQESAGIRDSRV--PARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSL
        +QQE +GI DSR+  PAR+SQRLSDKITALQKLVSPYGK                      NLLQ+QS SY+SL  +GI+QK+  LRSEGLCLVPVT++ 
Subjt:  SQQESAGIRDSRV--PARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSL

Query:  KIPI
        KIPI
Subjt:  KIPI

XP_022993169.1 transcription factor bHLH112-like isoform X1 [Cucurbita maxima]7.9e-6564.76Show/hide
Query:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY
        GFCLESKLFNNDGQLKG GFTIPCQHP +YQPGC+AS S +ENVSPQ +LFP K SFLQNES+AKKREFFAQKG+Q APYD+AGDNKRMK+         
Subjt:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY

Query:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK
                    + P RRSQRLSDKITALQKLVSPYGK                      NLLQMQSSSY++LNPQGIQQKQGNLRSEGLC+VPVT++ K
Subjt:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK

Query:  IPINQDIIMI
        I +N+DI ++
Subjt:  IPINQDIIMI

XP_023550777.1 transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo]6.1e-6565.24Show/hide
Query:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY
        GFCLESKLFNNDGQLKG GFTIPCQHP +YQPGC+AS SMTENVSPQ +LF  K SFLQNES+AKKREFFAQKG+Q APYD+AGDNKRMK+         
Subjt:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY

Query:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK
                    + PARRSQRLSDKITALQKLVSPYGK                      NLLQMQSSSY++LNPQG QQKQGNLRSEGLC+VPVT++ K
Subjt:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK

Query:  IPINQDIIMI
        I +N+DI ++
Subjt:  IPINQDIIMI

XP_023550779.1 transcription factor bHLH112-like isoform X2 [Cucurbita pepo subsp. pepo]1.8e-6465.24Show/hide
Query:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY
        GFCLESKLFNNDGQLKG GFTIPCQHP +YQPGC+AS SMTENVSPQ +LF  K SFLQNES+AKKREFFAQKG+Q APYD+AGDNKRMK          
Subjt:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY

Query:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK
                      PARRSQRLSDKITALQKLVSPYGK                      NLLQMQSSSY++LNPQG QQKQGNLRSEGLC+VPVT++ K
Subjt:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK

Query:  IPINQDIIMI
        I +N+DI ++
Subjt:  IPINQDIIMI

TrEMBL top hitse value%identityAlignment
A0A6J1C1Y0 transcription factor bHLH112-like isoform X22.4e-6771.08Show/hide
Query:  FCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCYL
        FCLESKLFNNDGQLK GGFTIPCQ P SYQPGCSASISM ++VS Q ILFP K SFLQNESNAKKREFFAQKGL+T+P DVAGDNKRMKV+ALEQG  YL
Subjt:  FCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCYL

Query:  SQQESAGIRDSRV--PARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSL
        +QQE +GI DSR+  PAR+SQRLSDKITALQKLVSPYGK                      NLLQ+QS SY+SL  +GI+QK+  LRSEGLCLVPVT++ 
Subjt:  SQQESAGIRDSRV--PARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSL

Query:  KIPI
        KIPI
Subjt:  KIPI

A0A6J1FDK1 transcription factor bHLH112-like isoform X23.6e-6363.33Show/hide
Query:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY
        GFCLESKLFNNDGQLKG GFTIPCQHP +YQPGC+AS SMTENVSPQ +LFP K SF QNES+AKKREFFAQKG+Q APYD+AGDNKRMK          
Subjt:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY

Query:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK
                      P RRSQRLSDKITALQKLVSPYGK                      NLLQMQSS+Y++LNPQG QQ+QGNLRSEGLC+VPVT++ K
Subjt:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK

Query:  IPINQDIIMI
        I +++DI ++
Subjt:  IPINQDIIMI

A0A6J1FEH8 transcription factor bHLH112-like isoform X11.2e-6363.33Show/hide
Query:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY
        GFCLESKLFNNDGQLKG GFTIPCQHP +YQPGC+AS SMTENVSPQ +LFP K SF QNES+AKKREFFAQKG+Q APYD+AGDNKRMK+         
Subjt:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY

Query:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK
                    + P RRSQRLSDKITALQKLVSPYGK                      NLLQMQSS+Y++LNPQG QQ+QGNLRSEGLC+VPVT++ K
Subjt:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK

Query:  IPINQDIIMI
        I +++DI ++
Subjt:  IPINQDIIMI

A0A6J1JS15 transcription factor bHLH112-like isoform X21.1e-6464.76Show/hide
Query:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY
        GFCLESKLFNNDGQLKG GFTIPCQHP +YQPGC+AS S +ENVSPQ +LFP K SFLQNES+AKKREFFAQKG+Q APYD+AGDNKRMK          
Subjt:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY

Query:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK
                      P RRSQRLSDKITALQKLVSPYGK                      NLLQMQSSSY++LNPQGIQQKQGNLRSEGLC+VPVT++ K
Subjt:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK

Query:  IPINQDIIMI
        I +N+DI ++
Subjt:  IPINQDIIMI

A0A6J1JZG5 transcription factor bHLH112-like isoform X13.8e-6564.76Show/hide
Query:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY
        GFCLESKLFNNDGQLKG GFTIPCQHP +YQPGC+AS S +ENVSPQ +LFP K SFLQNES+AKKREFFAQKG+Q APYD+AGDNKRMK+         
Subjt:  GFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKFSFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCY

Query:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK
                    + P RRSQRLSDKITALQKLVSPYGK                      NLLQMQSSSY++LNPQGIQQKQGNLRSEGLC+VPVT++ K
Subjt:  LSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGK----------------------NLLQMQSSSYRSLNPQGIQQKQGNLRSEGLCLVPVTYSLK

Query:  IPINQDIIMI
        I +N+DI ++
Subjt:  IPINQDIIMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31730.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.9e-0435.37Show/hide
Query:  RSQRLSDKITALQKLVSPYGK--------------NLLQMQ----SSSYRSLNPQGIQQ--KQGNLRSEGLCLVPVTYSLKI
        R  +L+++I+ALQ+LVSPYGK                LQ Q    S+ Y    P   ++  ++ +LRS+GLCLVP+ Y+ ++
Subjt:  RSQRLSDKITALQKLVSPYGK--------------NLLQMQ----SSSYRSLNPQGIQQ--KQGNLRSEGLCLVPVTYSLKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTTTTCTGCAAAACATTTCCTCAAATGGACAGTGGTCAAGGCCAACCTTTCAAATTATGCGATCGAAAGAGAAGAAGACGCTGGCGATTTCCGAGTCTGAGGGC
CACATGTCAAGTTGTAATCCAAGAAAGTGAGCTCTTGCTTGGTGCTGCTGAGAGTGGCTTCTGTCTGGAGTCCAAGTTATTCAACAATGATGGCCAGCTAAAAGGTGGAG
GCTTCACTATTCCTTGTCAGCACCCCTTTAGCTACCAGCCAGGTTGCAGTGCAAGCATATCCATGACTGAGAATGTTTCACCACAGCCAATATTGTTTCCTAACAAGTTC
TCTTTTCTGCAGAATGAATCGAACGCAAAGAAACGTGAGTTCTTTGCCCAAAAAGGCCTACAAACAGCTCCATATGATGTAGCAGGAGATAACAAGAGAATGAAGGTCAG
TGCCTTGGAACAGGGCTCGTGTTACTTAAGCCAACAAGAATCAGCTGGAATCCGAGATAGCAGAGTACCAGCCAGGAGAAGCCAAAGGCTTAGCGATAAAATTACTGCCC
TTCAAAAGCTGGTTTCCCCTTACGGCAAGAATCTACTTCAGATGCAGAGTAGCTCATATAGAAGCCTAAATCCTCAGGGAATTCAACAGAAGCAAGGAAATCTAAGAAGT
GAAGGACTATGTTTGGTTCCTGTGACTTATTCTCTGAAAATACCCATTAATCAGGACATAATTATGATCCAACCCCATAATTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTTTTCTGCAAAACATTTCCTCAAATGGACAGTGGTCAAGGCCAACCTTTCAAATTATGCGATCGAAAGAGAAGAAGACGCTGGCGATTTCCGAGTCTGAGGGC
CACATGTCAAGTTGTAATCCAAGAAAGTGAGCTCTTGCTTGGTGCTGCTGAGAGTGGCTTCTGTCTGGAGTCCAAGTTATTCAACAATGATGGCCAGCTAAAAGGTGGAG
GCTTCACTATTCCTTGTCAGCACCCCTTTAGCTACCAGCCAGGTTGCAGTGCAAGCATATCCATGACTGAGAATGTTTCACCACAGCCAATATTGTTTCCTAACAAGTTC
TCTTTTCTGCAGAATGAATCGAACGCAAAGAAACGTGAGTTCTTTGCCCAAAAAGGCCTACAAACAGCTCCATATGATGTAGCAGGAGATAACAAGAGAATGAAGGTCAG
TGCCTTGGAACAGGGCTCGTGTTACTTAAGCCAACAAGAATCAGCTGGAATCCGAGATAGCAGAGTACCAGCCAGGAGAAGCCAAAGGCTTAGCGATAAAATTACTGCCC
TTCAAAAGCTGGTTTCCCCTTACGGCAAGAATCTACTTCAGATGCAGAGTAGCTCATATAGAAGCCTAAATCCTCAGGGAATTCAACAGAAGCAAGGAAATCTAAGAAGT
GAAGGACTATGTTTGGTTCCTGTGACTTATTCTCTGAAAATACCCATTAATCAGGACATAATTATGATCCAACCCCATAATTTCTAG
Protein sequenceShow/hide protein sequence
MGVFCKTFPQMDSGQGQPFKLCDRKRRRRWRFPSLRATCQVVIQESELLLGAAESGFCLESKLFNNDGQLKGGGFTIPCQHPFSYQPGCSASISMTENVSPQPILFPNKF
SFLQNESNAKKREFFAQKGLQTAPYDVAGDNKRMKVSALEQGSCYLSQQESAGIRDSRVPARRSQRLSDKITALQKLVSPYGKNLLQMQSSSYRSLNPQGIQQKQGNLRS
EGLCLVPVTYSLKIPINQDIIMIQPHNF