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Spg040008 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg040008
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Genome locationscaffold10:23786935..23792538
RNA-Seq ExpressionSpg040008
SyntenySpg040008
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008234 - cysteine-type peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038227.1 hypothetical protein E6C27_scaffold270G00670 [Cucumis melo var. makuwa]4.7e-0664.91Show/hide
Query:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDY-VPNYLSDLIPKMVGLLG
        SRA E+VGPLVQDL  VLKGTT LLS KWVGVN VL    + +YL  L  +M GLLG
Subjt:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDY-VPNYLSDLIPKMVGLLG

KAA0047518.1 gag-protease polyprotein [Cucumis melo var. makuwa]4.2e-0776.74Show/hide
Query:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDYVPNY
        SRA E+VGPLVQDL  VLKGTT LLS KWVGVNF L  YVP+Y
Subjt:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDYVPNY

KAA0047869.1 hypothetical protein E6C27_scaffold133G001380 [Cucumis melo var. makuwa]7.2e-0756.94Show/hide
Query:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDYVPNYLSDLIPKMVGLLGRRCLATLTHADQRIIS
        SRA E+VGPLVQDL  VLKGTT LLS KWVGVN VL        S L PK    LG+R     T+ D RI+S
Subjt:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDYVPNYLSDLIPKMVGLLGRRCLATLTHADQRIIS

TYJ96446.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]3.0e-0541.51Show/hide
Query:  HPTELFDFELQRS----VAVIEPSSSLHWNRVGSEVAIVDLSAAATPSPSLDFKLQDASKPKPRHSIYRASRAKERVGPLVQDLVLVLKGTTSLLSLKWV
        HP E  D+   ++    V +     S+H       V IVD           DF L+D  KP         S+AKE+VGPLVQDL  +LKGTT LLS KWV
Subjt:  HPTELFDFELQRS----VAVIEPSSSLHWNRVGSEVAIVDLSAAATPSPSLDFKLQDASKPKPRHSIYRASRAKERVGPLVQDLVLVLKGTTSLLSLKWV

Query:  GVNFVL
        GVN +L
Subjt:  GVNFVL

TYK30622.1 hypothetical protein E5676_scaffold84664G00370 [Cucumis melo var. makuwa]1.4e-0563.16Show/hide
Query:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDY-VPNYLSDLIPKMVGLLG
        SR  E+VGPLVQDL  VLKGTT LLS KWVGVN VL    + +YL  L  +M GLLG
Subjt:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDY-VPNYLSDLIPKMVGLLG

TrEMBL top hitse value%identityAlignment
A0A5A7T9D5 Uncharacterized protein2.3e-0664.91Show/hide
Query:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDY-VPNYLSDLIPKMVGLLG
        SRA E+VGPLVQDL  VLKGTT LLS KWVGVN VL    + +YL  L  +M GLLG
Subjt:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDY-VPNYLSDLIPKMVGLLG

A0A5A7U348 Uncharacterized protein3.5e-0756.94Show/hide
Query:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDYVPNYLSDLIPKMVGLLGRRCLATLTHADQRIIS
        SRA E+VGPLVQDL  VLKGTT LLS KWVGVN VL        S L PK    LG+R     T+ D RI+S
Subjt:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDYVPNYLSDLIPKMVGLLGRRCLATLTHADQRIIS

A0A5D3BC12 Transposon Tf2-6 polyprotein1.5e-0541.51Show/hide
Query:  HPTELFDFELQRS----VAVIEPSSSLHWNRVGSEVAIVDLSAAATPSPSLDFKLQDASKPKPRHSIYRASRAKERVGPLVQDLVLVLKGTTSLLSLKWV
        HP E  D+   ++    V +     S+H       V IVD           DF L+D  KP         S+AKE+VGPLVQDL  +LKGTT LLS KWV
Subjt:  HPTELFDFELQRS----VAVIEPSSSLHWNRVGSEVAIVDLSAAATPSPSLDFKLQDASKPKPRHSIYRASRAKERVGPLVQDLVLVLKGTTSLLSLKWV

Query:  GVNFVL
        GVN +L
Subjt:  GVNFVL

A0A5D3DRY2 Gag-protease polyprotein2.0e-0776.74Show/hide
Query:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDYVPNY
        SRA E+VGPLVQDL  VLKGTT LLS KWVGVNF L  YVP+Y
Subjt:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDYVPNY

A0A5D3E3Z2 Uncharacterized protein6.6e-0663.16Show/hide
Query:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDY-VPNYLSDLIPKMVGLLG
        SR  E+VGPLVQDL  VLKGTT LLS KWVGVN VL    + +YL  L  +M GLLG
Subjt:  SRAKERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDY-VPNYLSDLIPKMVGLLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATATGCTTCTTTCTCCCTAAATTCATCATGGTCGGGTTCCCACAAGCCCGTTCTAAGGTCGGAGAATAGCGGGGAAGACTCTAGCAGTAGTCCATGTAAAGA
TCGTGATTCAAAACATCCCACGGAGTTGTTTGATTTTGAGCTTCAAAGATCTGTAGCTGTCATCGAGCCGTCGTCAAGCTTGCATTGGAATCGTGTCGGATCTGAAGTTG
CTATTGTCGATTTGTCCGCTGCTGCCACCCCGTCTCCCTCTCTCGATTTTAAGCTGCAAGATGCCTCTAAACCTAAACCAAGACACTCTATTTATAGGGCTTCTCGGGCC
AAGGAGAGGGTGGGGCCCCTTGTTCAAGACCTGGTGTTAGTACTTAAGGGAACAACCTCTCTACTCTCCCTGAAATGGGTAGGAGTGAATTTCGTCTTGCGAGACTATGT
CCCCAACTATCTATCCGATCTTATCCCCAAAATGGTAGGCTTGTTGGGTCGGCGATGTCTGGCCACTCTCACCCATGCAGATCAAAGAATAATCTCGTATAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATATGCTTCTTTCTCCCTAAATTCATCATGGTCGGGTTCCCACAAGCCCGTTCTAAGGTCGGAGAATAGCGGGGAAGACTCTAGCAGTAGTCCATGTAAAGA
TCGTGATTCAAAACATCCCACGGAGTTGTTTGATTTTGAGCTTCAAAGATCTGTAGCTGTCATCGAGCCGTCGTCAAGCTTGCATTGGAATCGTGTCGGATCTGAAGTTG
CTATTGTCGATTTGTCCGCTGCTGCCACCCCGTCTCCCTCTCTCGATTTTAAGCTGCAAGATGCCTCTAAACCTAAACCAAGACACTCTATTTATAGGGCTTCTCGGGCC
AAGGAGAGGGTGGGGCCCCTTGTTCAAGACCTGGTGTTAGTACTTAAGGGAACAACCTCTCTACTCTCCCTGAAATGGGTAGGAGTGAATTTCGTCTTGCGAGACTATGT
CCCCAACTATCTATCCGATCTTATCCCCAAAATGGTAGGCTTGTTGGGTCGGCGATGTCTGGCCACTCTCACCCATGCAGATCAAAGAATAATCTCGTATAAATAG
Protein sequenceShow/hide protein sequence
MDSYASFSLNSSWSGSHKPVLRSENSGEDSSSSPCKDRDSKHPTELFDFELQRSVAVIEPSSSLHWNRVGSEVAIVDLSAAATPSPSLDFKLQDASKPKPRHSIYRASRA
KERVGPLVQDLVLVLKGTTSLLSLKWVGVNFVLRDYVPNYLSDLIPKMVGLLGRRCLATLTHADQRIISYK