; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg040013 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg040013
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H protein
Genome locationscaffold10:24505608..24511219
RNA-Seq ExpressionSpg040013
SyntenySpg040013
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TQD69489.1 hypothetical protein C1H46_044978 [Malus baccata]3.6e-0440.91Show/hide
Query:  LEKLTRDFLWERVEEGKGAHLVACLESFKLDLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL
        LEKL + FLWE VEEGK  HLV                           E+  +     GL +GNLR  N ALLAKWL +F  ES SL
Subjt:  LEKLTRDFLWERVEEGKGAHLVACLESFKLDLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]7.9e-0429.75Show/hide
Query:  NRRRNSIMELLSTSGDSLVDDASIESEFVSFYRKLFTKKRQSDLLLISFQSSL-------------ICNVLEKLTRDFLWERVEEGKGAHLVACLESFKL
        NR ++S++ +    G  L + A++  + +S ++K F  K     L+ S    +             +   LEK+ RDFLWE VEEG GAHLV   E    
Subjt:  NRRRNSIMELLSTSGDSLVDDASIESEFVSFYRKLFTKKRQSDLLLISFQSSL-------------ICNVLEKLTRDFLWERVEEGKGAHLVACLESFKL

Query:  DLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL
                               + +   GL +GNLR  N A LAKWL +F  E  +L
Subjt:  DLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL

TrEMBL top hitse value%identityAlignment
A0A540K5H1 Uncharacterized protein1.7e-0440.91Show/hide
Query:  LEKLTRDFLWERVEEGKGAHLVACLESFKLDLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL
        LEKL + FLWE VEEGK  HLV                           E+  +     GL +GNLR  N ALLAKWL +F  ES SL
Subjt:  LEKLTRDFLWERVEEGKGAHLVACLESFKLDLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL

A0A5A7U0K0 NTP_transf_2 domain-containing protein8.6e-0437.97Show/hide
Query:  VLEKLTRDFLWERVEEGKGAHLVACLESFKLDLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWL
        +++  T+DFLWERV+EGKG HLV+                          E  +  V+   LE+GNL + N+ALLAKWL
Subjt:  VLEKLTRDFLWERVEEGKGAHLVACLESFKLDLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWL

A0A5N5H648 Ribonuclease H protein6.6e-0440.91Show/hide
Query:  LEKLTRDFLWERVEEGKGAHLVACLESFKLDLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL
        LEKL + FLWE VEEGK  HLV                           EI  +     GL +GNLR  N ALLAKWL +F  E +SL
Subjt:  LEKLTRDFLWERVEEGKGAHLVACLESFKLDLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL

A0A6J1DFI2 uncharacterized protein LOC1110196243.8e-0429.75Show/hide
Query:  NRRRNSIMELLSTSGDSLVDDASIESEFVSFYRKLFTKKRQSDLLLISFQSSL-------------ICNVLEKLTRDFLWERVEEGKGAHLVACLESFKL
        NR ++S++ +    G  L + A++  + +S ++K F  K     L+ S    +             +   LEK+ RDFLWE VEEG GAHLV   E    
Subjt:  NRRRNSIMELLSTSGDSLVDDASIESEFVSFYRKLFTKKRQSDLLLISFQSSL-------------ICNVLEKLTRDFLWERVEEGKGAHLVACLESFKL

Query:  DLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL
                               + +   GL +GNLR  N A LAKWL +F  E  +L
Subjt:  DLINHACGVIRISNKVSCLEIFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL

M5VT69 Uncharacterized protein (Fragment)3.8e-0434.65Show/hide
Query:  DASIESEFVSFYRKLFTKKRQSDLLLISFQSSLICNVLEKLTRDFLWERVEEGKGAHLVA--CLESFKLDLINHACGVIRISNKVSCLEIFDRQVSLVGL
        +ASIE+  V        K R   + L    SS++ N +EKL R FLWE VEEGK  HLV    +  FK++                            GL
Subjt:  DASIESEFVSFYRKLFTKKRQSDLLLISFQSSLICNVLEKLTRDFLWERVEEGKGAHLVA--CLESFKLDLINHACGVIRISNKVSCLEIFDRQVSLVGL

Query:  ELGNLRTHNRALLAKWLLQFRLESDSL
         +G+L   N  L AKWL +F LE +SL
Subjt:  ELGNLRTHNRALLAKWLLQFRLESDSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAAACAGAAGAAGGAATTCTATTATGGAGCTTTTATCAACTTCTGGAGACAGTCTGGTGGATGATGCTAGCATCGAATCTGAATTTGTTAGCTTTTACAGAAA
GCTATTCACTAAAAAGCGGCAATCCGATTTACTTCTTATCTCTTTTCAGAGTTCCTTGATTTGTAATGTTCTAGAGAAGCTCACGAGGGATTTTTTATGGGAAAGGGTTG
AAGAAGGGAAAGGGGCTCACTTAGTTGCATGCTTAGAATCATTCAAGCTTGACTTGATCAATCATGCTTGTGGAGTGATTCGAATCTCAAACAAGGTTTCTTGCCTTGAG
ATATTTGATCGACAAGTGAGTCTGGTGGGTTTAGAGTTGGGCAACTTGAGGACTCATAACAGAGCCTTGCTTGCTAAGTGGCTTTTGCAATTTCGCCTTGAATCTGATTC
TCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAAACAGAAGAAGGAATTCTATTATGGAGCTTTTATCAACTTCTGGAGACAGTCTGGTGGATGATGCTAGCATCGAATCTGAATTTGTTAGCTTTTACAGAAA
GCTATTCACTAAAAAGCGGCAATCCGATTTACTTCTTATCTCTTTTCAGAGTTCCTTGATTTGTAATGTTCTAGAGAAGCTCACGAGGGATTTTTTATGGGAAAGGGTTG
AAGAAGGGAAAGGGGCTCACTTAGTTGCATGCTTAGAATCATTCAAGCTTGACTTGATCAATCATGCTTGTGGAGTGATTCGAATCTCAAACAAGGTTTCTTGCCTTGAG
ATATTTGATCGACAAGTGAGTCTGGTGGGTTTAGAGTTGGGCAACTTGAGGACTCATAACAGAGCCTTGCTTGCTAAGTGGCTTTTGCAATTTCGCCTTGAATCTGATTC
TCTTTAG
Protein sequenceShow/hide protein sequence
MAANRRRNSIMELLSTSGDSLVDDASIESEFVSFYRKLFTKKRQSDLLLISFQSSLICNVLEKLTRDFLWERVEEGKGAHLVACLESFKLDLINHACGVIRISNKVSCLE
IFDRQVSLVGLELGNLRTHNRALLAKWLLQFRLESDSL