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Spg040019 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg040019
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionnuclear pore complex protein NUP160
Genome locationscaffold10:24990353..25026994
RNA-Seq ExpressionSpg040019
SyntenySpg040019
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0033036 - macromolecule localization (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0071702 - organic substance transport (biological process)
GO:0071705 - nitrogen compound transport (biological process)
GO:0005643 - nuclear pore (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649106.1 nuclear pore complex protein NUP160 isoform X1 [Cucumis sativus]1.1e-2585.51Show/hide
Query:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
        +DLSLE IYIYSLRFSWGDRVSLLLEPS H+IPL+QGGCLDVKLA DKIWVLKDNALIFLDL   DGH+
Subjt:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
XP_011649107.1 nuclear pore complex protein NUP160 isoform X2 [Cucumis sativus]1.1e-2585.51Show/hide
Query:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
        +DLSLE IYIYSLRFSWGDRVSLLLEPS H+IPL+QGGCLDVKLA DKIWVLKDNALIFLDL   DGH+
Subjt:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
XP_011649109.1 nuclear pore complex protein NUP160 isoform X3 [Cucumis sativus]1.1e-2585.51Show/hide
Query:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
        +DLSLE IYIYSLRFSWGDRVSLLLEPS H+IPL+QGGCLDVKLA DKIWVLKDNALIFLDL   DGH+
Subjt:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
XP_022155989.1 nuclear pore complex protein NUP160 isoform X1 [Momordica charantia]6.6e-2685.51Show/hide
Query:  FTYKDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPD
        + + DLSLE IYIYSLRFSWGD+VSL+LEPS HNIPLDQGGCLDVKLASDKIWVLKDNALIFLDL P D
Subjt:  FTYKDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPD
XP_022155992.1 nuclear pore complex protein NUP160 isoform X2 [Momordica charantia]6.6e-2685.51Show/hide
Query:  FTYKDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPD
        + + DLSLE IYIYSLRFSWGD+VSL+LEPS HNIPLDQGGCLDVKLASDKIWVLKDNALIFLDL P D
Subjt:  FTYKDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPD
TrEMBL top hitse value%identityAlignment
A0A0A0LLC2 Uncharacterized protein5.5e-2685.51Show/hide
Query:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
        +DLSLE IYIYSLRFSWGDRVSLLLEPS H+IPL+QGGCLDVKLA DKIWVLKDNALIFLDL   DGH+
Subjt:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
A0A1S3C4Y2 nuclear pore complex protein NUP160 isoform X22.1e-2584.06Show/hide
Query:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
        +DLSLE IYIYSLRFSWGDRVSLLLEPS H+IPL+QGGCLDVKLA DKIWVLKDNALIFLDL   +GH+
Subjt:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
A0A1S3C516 nuclear pore complex protein NUP160 isoform X52.1e-2584.06Show/hide
Query:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
        +DLSLE IYIYSLRFSWGDRVSLLLEPS H+IPL+QGGCLDVKLA DKIWVLKDNALIFLDL   +GH+
Subjt:  KDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA
A0A6J1DQV6 nuclear pore complex protein NUP160 isoform X23.2e-2685.51Show/hide
Query:  FTYKDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPD
        + + DLSLE IYIYSLRFSWGD+VSL+LEPS HNIPLDQGGCLDVKLASDKIWVLKDNALIFLDL P D
Subjt:  FTYKDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPD
A0A6J1DRY3 nuclear pore complex protein NUP160 isoform X13.2e-2685.51Show/hide
Query:  FTYKDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPD
        + + DLSLE IYIYSLRFSWGD+VSL+LEPS HNIPLDQGGCLDVKLASDKIWVLKDNALIFLDL P D
Subjt:  FTYKDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPD
SwissProt top hitse value%identityAlignment
Q9C811 Nuclear pore complex protein NUP1603.2e-0744.44Show/hide
Query:  SLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNAL
        S+++I +Y L FS  + ++L L+  + NIPL++G   DV+  SDKIW LK N L
Subjt:  SLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNAL
Arabidopsis top hitse value%identityAlignment
AT1G33410.1 SUPPRESSOR OF AUXIN RESISTANCE12.3e-0844.44Show/hide
Query:  SLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNAL
        S+++I +Y L FS  + ++L L+  + NIPL++G   DV+  SDKIW LK N L
Subjt:  SLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNAL
AT1G33410.2 SUPPRESSOR OF AUXIN RESISTANCE12.3e-0844.44Show/hide
Query:  SLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNAL
        S+++I +Y L FS  + ++L L+  + NIPL++G   DV+  SDKIW LK N L
Subjt:  SLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAATTTTCCCATTTCACATATAAGGATCTTAGCCTAGAAATGATCTACATATATAGCTTACGTTTTAGCTGGGGAGACAGGGTCAGTCTATTGTTGGAGCCTTC
AGTGCACAATATTCCCTTGGATCAGGGTGGATGTCTTGATGTAAAACTTGCATCAGATAAAATATGGGTCTTAAAGGACAATGCATTGATCTTTCTCGACTTGTTCCCTC
CCGATGGTCATGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAATTTTCCCATTTCACATATAAGGATCTTAGCCTAGAAATGATCTACATATATAGCTTACGTTTTAGCTGGGGAGACAGGGTCAGTCTATTGTTGGAGCCTTC
AGTGCACAATATTCCCTTGGATCAGGGTGGATGTCTTGATGTAAAACTTGCATCAGATAAAATATGGGTCTTAAAGGACAATGCATTGATCTTTCTCGACTTGTTCCCTC
CCGATGGTCATGCGTAA
Protein sequenceShow/hide protein sequence
MSQFSHFTYKDLSLEMIYIYSLRFSWGDRVSLLLEPSVHNIPLDQGGCLDVKLASDKIWVLKDNALIFLDLFPPDGHA