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Tan0000011 (gene) of Snake gourd v1 genome

Gene IDTan0000011
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG09:59736135..59737937
RNA-Seq ExpressionTan0000011
SyntenyTan0000011
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059092.1 hypothetical protein E6C27_scaffold601G00030 [Cucumis melo var. makuwa]2.9e-1777.94Show/hide
Query:  MAGFSVHRTMSWFVVVAVVLLLAVARAQDSGGLAPLPAMDAGAGFQVTFSSGGVLLSMFICLTALLCH
        MAGFS+HR M W  VV +VLLLAVARAQD  GLAPLPAMDAG GFQVTFS+GG+LLSMFI L ALL H
Subjt:  MAGFSVHRTMSWFVVVAVVLLLAVARAQDSGGLAPLPAMDAGAGFQVTFSSGGVLLSMFICLTALLCH
KGN66478.1 hypothetical protein Csa_007521 [Cucumis sativus]1.9e-1675Show/hide
Query:  MAGFSVHRTMSWFVVVAVVLLLAVARAQDSGGLAPLPAMDAGAGFQVTFSSGGVLLSMFICLTALLCH
        MAGFS+HR   W  VV +VLLLAVARAQD  GLAPLPAMDAG GFQVTFS+GG+LLSMFI L  LL H
Subjt:  MAGFSVHRTMSWFVVVAVVLLLAVARAQDSGGLAPLPAMDAGAGFQVTFSSGGVLLSMFICLTALLCH
TrEMBL top hitse value%identityAlignment
A0A0A0LXI4 Uncharacterized protein9.0e-1775Show/hide
Query:  MAGFSVHRTMSWFVVVAVVLLLAVARAQDSGGLAPLPAMDAGAGFQVTFSSGGVLLSMFICLTALLCH
        MAGFS+HR   W  VV +VLLLAVARAQD  GLAPLPAMDAG GFQVTFS+GG+LLSMFI L  LL H
Subjt:  MAGFSVHRTMSWFVVVAVVLLLAVARAQDSGGLAPLPAMDAGAGFQVTFSSGGVLLSMFICLTALLCH
A0A5D3D5P4 Uncharacterized protein1.4e-1777.94Show/hide
Query:  MAGFSVHRTMSWFVVVAVVLLLAVARAQDSGGLAPLPAMDAGAGFQVTFSSGGVLLSMFICLTALLCH
        MAGFS+HR M W  VV +VLLLAVARAQD  GLAPLPAMDAG GFQVTFS+GG+LLSMFI L ALL H
Subjt:  MAGFSVHRTMSWFVVVAVVLLLAVARAQDSGGLAPLPAMDAGAGFQVTFSSGGVLLSMFICLTALLCH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGATTCAGCGTCCACAGGACGATGAGCTGGTTCGTGGTGGTGGCTGTAGTGCTTCTGCTTGCAGTGGCAAGAGCTCAAGACAGCGGAGGACTTGCACCGTTGCC
AGCTATGGATGCTGGGGCTGGATTTCAGGTGACATTTTCCAGTGGCGGTGTTCTGCTATCGATGTTCATCTGCCTCACTGCGCTTCTTTGCCATTAG
mRNA sequenceShow/hide mRNA sequence
GCGGGAGAGGCATTATAGGGCCCTGTGAGCAGCAAAGTAAGCTAATATGTCATCCTCAAAAAGAGCTGTAAGCCATCTAAAGAAGCAACATCACAATCAGTAAACTCAAT
ATTCATCAATCACAAACAATTTAATCTCCACAATTCATTTCCATATGCCTGTATAAATATTGCTTCCCTCACTCCCATCTCCAGCACCAATTTCATATAACCTCCCTGGA
TACTGTTCCTCCTTTCCTTTCTTGCTTTTCAAGTTTTCTGTGCAGACATCAATGGCAGGATTCAGCGTCCACAGGACGATGAGCTGGTTCGTGGTGGTGGCTGTAGTGCT
TCTGCTTGCAGTGGCAAGAGCTCAAGACAGCGGAGGACTTGCACCGTTGCCAGCTATGGATGCTGGGGCTGGATTTCAGGTGACATTTTCCAGTGGCGGTGTTCTGCTAT
CGATGTTCATCTGCCTCACTGCGCTTCTTTGCCATTAGATGTCAGATCTTCCTGCTTTCTCATTGATCAGTATGATTGGATTTTGATGGTTTGTATGTATATGTTGTTGT
AATGGTGCTGGCGCTATTTTTTCTTTCTTTTTGGCCATGATACTATATGTGGGACTTGATTCTCCATGCTTTTGATATGTAATCTCAGAGGTATAATAAATAAAGAATTG
TTTTTGACATTGAGTTTTTCCAAAAAGAAAAAGATGCTGCAAAGGATGATCATAGAAAATGCATGGAAAAATAAGTATTAGAACACTCAGATAGGAATCTAGCAGTGCTA
TTTTTCATATGGCTTTTCAGCAGCCAAACAAAGGACAATTAAAAAGAGAAGAAACGGGTTTCTGTCAAAGTTCCAACAATTCAAGACTGACTTTCTATATACTAACAAAT
CAAAGTGCTTACAATGAGAGCTTCCAAGAGAAGAAAAAGACTTCTGTAAAGGATCTAATCACCAGAGACTTGCCAATAAAAACCATTAAAAATTAGCAGCGAGTGTCTCG
AGATGATTTATTAGAAACATAAAACCTTAGAGAAATAGACATCCGTAATCCAAGCTCTAAAACATGTAATAGAAAAAAATAATGTAACCCACTTGAGTAAGTGGAGTATA
CAACAGTATGAATCCAAGTTCTATCTCTCTCTCTCCCTTCTATCTAAAATTGCTCAGACAATGCATAGAATAAAATATCAGAGGAGGAAAACAGTCGTTTCAAGTTTCAA
CCACTAATTTTCAGAATCTTGGATTAATATCAAAGTTTGGGGTTGAGAAAAGAGAGATTGGAACATGATGCCTGAAAGGCACCTATCGGATTATTTCAAATAGTCCAAGC
AATTGACATTCATCAAGCAGCAGTAAATATATTAAGCCACAAATTGCATATAATAAGCATAACTAAGCCGCAGACAATTCCCAGTGCGGCAATATCAAAGGAGAAAAAAC
CAAACATCCAATAAAGCTCAATAAATGATAAAGAAAAACTCTGTACACTTGAAAACAACCCGACTTTCACCCTTTCCCTGTCATCATTAACATGCCCAATTATCAGCAAT
ATGAAGCTATGAACCATATTGAAACTGAAATTTTCCAAAGAATCTTCCTCTTCTTAGAAACTCTTTTGCCAGATTCTACAACGCCGTTGCTTTTGTAGGACAAAAATAAA
TTATATAAATCTAAGAGAATTTACAAGAAAGAAGATGGTGGGAAATTCTCTGACTAAGAAGACAAATTAAAAGAAAAAATTAGAAAAATGTGGCCCAACTAAGCACACGG
AAGAAGAGAAGGTAAAAAGAAAATCTAAAGCCTTACCATTTTG
Protein sequenceShow/hide protein sequence
MAGFSVHRTMSWFVVVAVVLLLAVARAQDSGGLAPLPAMDAGAGFQVTFSSGGVLLSMFICLTALLCH