| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-218 | 61.27 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
MSS+IIALL D+L G+NY +WK+ +N ILV D+ FVL EECP P AS+ VRD YDRW +AN+KA+++I+ASMSD+L+KKHE+MV+A++IM+SL+E
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
Query: MFGQQSFQVR------HDSLKYIFN-------ARMKEGS-------------------------SVREHVLDMMTRF--NLAEMNGAS--IDESSQGIDS
MFGQ S Q++ H +++ + + KEG +V EH ++ E GA+ + S Q S
Subjt: MFGQQSFQVR------HDSLKYIFN-------ARMKEGS-------------------------SVREHVLDMMTRF--NLAEMNGAS--IDESSQGIDS
Query: WQPLREDEVTLRVGSGELVSAAAIG----------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGY
++ L + E+TL+VG+G+++SA A+G + +LVK+GLLN+L++ SLP CESCLEGKMTKRPF+GKGYRAKEPLELIHSDLC PMNVK RGG+
Subjt: WQPLREDEVTLRVGSGELVSAAAIG----------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGY
Query: EYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMM
EYF+SFIDDYSRYGY+YLM KSE LEKFKEYKTEVENLL K +K LRSDRGGEYMD FQDYMIEHGI SQLS PG PQQNGVSERRNRTLLDMVRSMM
Subjt: EYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMM
Query: SYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFHKCR
SYA+LP SFWGYAVETAV+ILNNVPSK+V ETPFELW GRK SL HFRIWGCPAHVLV+N KKLEPRSRLC FVG PKETRGGLF+DP+ENR
Subjt: SYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFHKCR
Query: FPEEDHIGDHLPRSKIVLNEMGDYIAKEFFDGTSASMAFIDPSASSQIR-SQELGMPRRSGRTVRQPDRYKGLAETSVVAANDDCEDPLTYNQAMVDVDK
F EEDH+ +H PRSK+VL+E D + D S + + S Q SQ L MPRRSGR V QP+RY GL ET VV +D EDPL+Y QAM DVDK
Subjt: FPEEDHIGDHLPRSKIVLNEMGDYIAKEFFDGTSASMAFIDPSASSQIR-SQELGMPRRSGRTVRQPDRYKGLAETSVVAANDDCEDPLTYNQAMVDVDK
Query: DEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
D+W+KAMD EMESMYFNSVWELVD P GVKPIGCKWIYKRKR GKV
Subjt: DEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
|
|
| KAA0060254.1 gag/pol protein [Cucumis melo var. makuwa] | 5.5e-221 | 58.89 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
M++A + +LA+DKL G+NY SWKN IN +L+ DD+KFVL EECPQ+P + A++ VR+ Y+RW + NEK + YI+AS+S+VLAKKHE M++A+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
Query: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESSQG-------IDSWQPLREDEVT----------------LRVGSGELV
MFGQ S+Q+ HD+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA IDE+SQG S + + + G G
Subjt: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESSQG-------IDSWQPLREDEVT----------------LRVGSGELV
Query: SAAAIGT-------------------------------------------VEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHS
+ AA T +E+LVK+G+L+ELEENSLP+CESCLEGKMTKRPF+GKG+RAKEPLEL+HS
Subjt: SAAAIGT-------------------------------------------VEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHS
Query: DLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSE
DLC PMNVK RG +EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E I SQLS PG PQQNGVSE
Subjt: DLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSE
Query: RRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFY
RRNRTLLDMVRSM+SYA LP+SFWGYAV+TAVYILN VPSK+V ETP +LW+GRKGSL HFRIWGCPAHVL +N KKLEPRS+LCLFVG PK TRGG FY
Subjt: RRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFY
Query: DPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQ-IRSQELGMPRRSGRTVRQPDRYKGLAETSVVAAND
D K+N+ F E+DHI +H PRSKIVLN++ I + + +SA + +S++ + Q L PRRSGR P RY L ET V ++
Subjt: DPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQ-IRSQELGMPRRSGRTVRQPDRYKGLAETSVVAAND
Query: DCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGK
D EDPLT+ +AM DVDKDEWIKAM+ E+ESMYFNSVW+LVDQP+GVKPIGCKWIYKRKRG DGK
Subjt: DCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGK
|
|
| TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-222 | 59.25 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
M++A + +LA+DKL G+NY SWKN IN +L+ DD+KFVL EECPQ+P + A++ VR+ Y+RW + NEK + YI+AS+S+VLAKKHE M++A+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
Query: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESSQG-------IDSWQPLREDEVT----------------LRVGSGELV
MFGQ S+Q+ HD+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA IDE+SQG S + + + G G
Subjt: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESSQG-------IDSWQPLREDEVT----------------LRVGSGELV
Query: SAAAIGT-------------------------------------------VEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHS
+ AA T +E+LVK+G+L+ELEENSLP+CESCLEGKMTKRPF+GKG+RAKEPLEL+HS
Subjt: SAAAIGT-------------------------------------------VEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHS
Query: DLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSE
DLC PMNVK RG +EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E I SQLS PG PQQNGVSE
Subjt: DLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSE
Query: RRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFY
RRNRTLLDMVRSM+SYA LP+SFWGYAV+TAVYILN VPSK+V ETP +LW+GRKGSL HFRIWGCPAHVL +N KKLEPRS+LCLFVG PK TRGG FY
Subjt: RRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFY
Query: DPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQI-RSQELGMPRRSGRTVRQPDRYKGLAETSVVAAND
DPK+N+ F EEDHI +H PRSKIVLNE+ + + SA + +S++ + Q L PRRSGR P RY L ET V ++
Subjt: DPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQI-RSQELGMPRRSGRTVRQPDRYKGLAETSVVAAND
Query: DCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
D EDPLT+ +AM DVDKDEWIKAM+ E+ESMYFNSVW+LVDQP+GVKPIGCKWIYKRKRG DGKV
Subjt: DCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
|
|
| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 3.3e-218 | 61.27 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
MSS+IIALL D+L G+NY +WK+ +N ILV D+ FVL EECP P AS+ VRD YDRW +AN+KA+++I+ASMSD+L+KKHE+MV+A++IM+SL+E
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
Query: MFGQQSFQVR------HDSLKYIFN-------ARMKEGS-------------------------SVREHVLDMMTRF--NLAEMNGAS--IDESSQGIDS
MFGQ S Q++ H +++ + + KEG +V EH ++ E GA+ + S Q S
Subjt: MFGQQSFQVR------HDSLKYIFN-------ARMKEGS-------------------------SVREHVLDMMTRF--NLAEMNGAS--IDESSQGIDS
Query: WQPLREDEVTLRVGSGELVSAAAIG----------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGY
++ L + E+TL+VG+G+++SA A+G + +LVK+GLLN+L++ SLP CESCLEGKMTKRPF+GKGYRAKEPLELIHSDLC PMNVK RGG+
Subjt: WQPLREDEVTLRVGSGELVSAAAIG----------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGY
Query: EYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMM
EYF+SFIDDYSRYGY+YLM KSE LEKFKEYKTEVENLL K +K LRSDRGGEYMD FQDYMIEHGI SQLS PG PQQNGVSERRNRTLLDMVRSMM
Subjt: EYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMM
Query: SYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFHKCR
SYA+LP SFWGYAVETAV+ILNNVPSK+V ETPFELW GRK SL HFRIWGCPAHVLV+N KKLEPRSRLC FVG PKETRGGLF+DP+ENR
Subjt: SYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFHKCR
Query: FPEEDHIGDHLPRSKIVLNEMGDYIAKEFFDGTSASMAFIDPSASSQIR-SQELGMPRRSGRTVRQPDRYKGLAETSVVAANDDCEDPLTYNQAMVDVDK
F EEDH+ +H PRSK+VL+E D + D S + + S Q SQ L MPRRSGR V QP+RY GL ET VV +D EDPL+Y QAM DVDK
Subjt: FPEEDHIGDHLPRSKIVLNEMGDYIAKEFFDGTSASMAFIDPSASSQIR-SQELGMPRRSGRTVRQPDRYKGLAETSVVAANDDCEDPLTYNQAMVDVDK
Query: DEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
D+W+KAMD EMESMYFNSVWELVD P GVKPIGCKWIYKRKR GKV
Subjt: DEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
|
|
| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-211 | 46.82 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
M+SA + +LA+DKL G+NY SWKN INT+L+ DD++FVL EECPQ+P + A+R VR+ Y+RW +ANEKA+ YI+AS+S+VLAKKHE M++A+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
Query: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESS-----------------------------------------------
MFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA IDE+S
Subjt: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESS-----------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------QGIDSWQPLREDEVTLRVGSGELVSAAAIG------------------------------------------------
QGI SW+ L E+T+RVG+G +VSA A+G
Subjt: ----------------------QGIDSWQPLREDEVTLRVGSGELVSAAAIG------------------------------------------------
Query: ----------------------------------------------------------------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFS
+E+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+
Subjt: ----------------------------------------------------------------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFS
Query: GKGYRAKEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITS
GKG+RAKEPLEL+HSDLC PMNVK RGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI S
Subjt: GKGYRAKEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITS
Query: QLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLC
QLS PG PQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+TAVYILN VPSK+V ETP +LW+GRKGSL HFRIWGCPAHVL +N KKLEPRS+LC
Subjt: QLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLC
Query: LFVGCPKETRGGLFYDPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQI-RSQELGMPRRSGRTVRQPD
LFVG PK TRGG FYDPK+N+ F EEDHI +H PRSKIVLNE+ + + SA + +S++ + Q L PRRSGR P
Subjt: LFVGCPKETRGGLFYDPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQI-RSQELGMPRRSGRTVRQPD
Query: RYKGLAETSVVAANDDCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
RY L ET V ++ D EDPLT+ +AM DVDKDEWIKAM+ E+ESMYFNSVW+LVDQP+GVKPIGCKWIYKRKRG DGKV
Subjt: RYKGLAETSVVAANDDCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.1e-211 | 46.82 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
M+SA + +LA+DKL G+NY SWKN INT+L+ DD++FVL EECPQ+P + A+R VR+ Y+RW +ANEKA+ YI+AS+S+VLAKKHE M++A+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
Query: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESS-----------------------------------------------
MFGQ S+Q++HD+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA IDE+S
Subjt: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESS-----------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------QGIDSWQPLREDEVTLRVGSGELVSAAAIG------------------------------------------------
QGI SW+ L E+T+RVG+G +VSA A+G
Subjt: ----------------------QGIDSWQPLREDEVTLRVGSGELVSAAAIG------------------------------------------------
Query: ----------------------------------------------------------------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFS
+E+LVK+GLL+ELEENSLPVCESCLEGKMTKRPF+
Subjt: ----------------------------------------------------------------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFS
Query: GKGYRAKEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITS
GKG+RAKEPLEL+HSDLC PMNVK RGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E GI S
Subjt: GKGYRAKEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITS
Query: QLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLC
QLS PG PQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+TAVYILN VPSK+V ETP +LW+GRKGSL HFRIWGCPAHVL +N KKLEPRS+LC
Subjt: QLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLC
Query: LFVGCPKETRGGLFYDPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQI-RSQELGMPRRSGRTVRQPD
LFVG PK TRGG FYDPK+N+ F EEDHI +H PRSKIVLNE+ + + SA + +S++ + Q L PRRSGR P
Subjt: LFVGCPKETRGGLFYDPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQI-RSQELGMPRRSGRTVRQPD
Query: RYKGLAETSVVAANDDCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
RY L ET V ++ D EDPLT+ +AM DVDKDEWIKAM+ E+ESMYFNSVW+LVDQP+GVKPIGCKWIYKRKRG DGKV
Subjt: RYKGLAETSVVAANDDCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
|
|
| A0A5A7UYE8 Gag/pol protein | 1.6e-218 | 61.27 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
MSS+IIALL D+L G+NY +WK+ +N ILV D+ FVL EECP P AS+ VRD YDRW +AN+KA+++I+ASMSD+L+KKHE+MV+A++IM+SL+E
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
Query: MFGQQSFQVR------HDSLKYIFN-------ARMKEGS-------------------------SVREHVLDMMTRF--NLAEMNGAS--IDESSQGIDS
MFGQ S Q++ H +++ + + KEG +V EH ++ E GA+ + S Q S
Subjt: MFGQQSFQVR------HDSLKYIFN-------ARMKEGS-------------------------SVREHVLDMMTRF--NLAEMNGAS--IDESSQGIDS
Query: WQPLREDEVTLRVGSGELVSAAAIG----------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGY
++ L + E+TL+VG+G+++SA A+G + +LVK+GLLN+L++ SLP CESCLEGKMTKRPF+GKGYRAKEPLELIHSDLC PMNVK RGG+
Subjt: WQPLREDEVTLRVGSGELVSAAAIG----------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGY
Query: EYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMM
EYF+SFIDDYSRYGY+YLM KSE LEKFKEYKTEVENLL K +K LRSDRGGEYMD FQDYMIEHGI SQLS PG PQQNGVSERRNRTLLDMVRSMM
Subjt: EYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMM
Query: SYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFHKCR
SYA+LP SFWGYAVETAV+ILNNVPSK+V ETPFELW GRK SL HFRIWGCPAHVLV+N KKLEPRSRLC FVG PKETRGGLF+DP+ENR
Subjt: SYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFHKCR
Query: FPEEDHIGDHLPRSKIVLNEMGDYIAKEFFDGTSASMAFIDPSASSQIR-SQELGMPRRSGRTVRQPDRYKGLAETSVVAANDDCEDPLTYNQAMVDVDK
F EEDH+ +H PRSK+VL+E D + D S + + S Q SQ L MPRRSGR V QP+RY GL ET VV +D EDPL+Y QAM DVDK
Subjt: FPEEDHIGDHLPRSKIVLNEMGDYIAKEFFDGTSASMAFIDPSASSQIR-SQELGMPRRSGRTVRQPDRYKGLAETSVVAANDDCEDPLTYNQAMVDVDK
Query: DEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
D+W+KAMD EMESMYFNSVWELVD P GVKPIGCKWIYKRKR GKV
Subjt: DEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
|
|
| A0A5A7UYX7 Gag/pol protein | 2.6e-221 | 58.89 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
M++A + +LA+DKL G+NY SWKN IN +L+ DD+KFVL EECPQ+P + A++ VR+ Y+RW + NEK + YI+AS+S+VLAKKHE M++A+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
Query: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESSQG-------IDSWQPLREDEVT----------------LRVGSGELV
MFGQ S+Q+ HD+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA IDE+SQG S + + + G G
Subjt: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESSQG-------IDSWQPLREDEVT----------------LRVGSGELV
Query: SAAAIGT-------------------------------------------VEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHS
+ AA T +E+LVK+G+L+ELEENSLP+CESCLEGKMTKRPF+GKG+RAKEPLEL+HS
Subjt: SAAAIGT-------------------------------------------VEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHS
Query: DLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSE
DLC PMNVK RG +EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E I SQLS PG PQQNGVSE
Subjt: DLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSE
Query: RRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFY
RRNRTLLDMVRSM+SYA LP+SFWGYAV+TAVYILN VPSK+V ETP +LW+GRKGSL HFRIWGCPAHVL +N KKLEPRS+LCLFVG PK TRGG FY
Subjt: RRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFY
Query: DPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQ-IRSQELGMPRRSGRTVRQPDRYKGLAETSVVAAND
D K+N+ F E+DHI +H PRSKIVLN++ I + + +SA + +S++ + Q L PRRSGR P RY L ET V ++
Subjt: DPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQ-IRSQELGMPRRSGRTVRQPDRYKGLAETSVVAAND
Query: DCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGK
D EDPLT+ +AM DVDKDEWIKAM+ E+ESMYFNSVW+LVDQP+GVKPIGCKWIYKRKRG DGK
Subjt: DCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGK
|
|
| A0A5D3BHG7 Gag/pol protein | 6.3e-223 | 59.25 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
M++A + +LA+DKL G+NY SWKN IN +L+ DD+KFVL EECPQ+P + A++ VR+ Y+RW + NEK + YI+AS+S+VLAKKHE M++A+EIM+SLQE
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
Query: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESSQG-------IDSWQPLREDEVT----------------LRVGSGELV
MFGQ S+Q+ HD+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA IDE+SQG S + + + G G
Subjt: MFGQQSFQVRHDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGASIDESSQG-------IDSWQPLREDEVT----------------LRVGSGELV
Query: SAAAIGT-------------------------------------------VEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHS
+ AA T +E+LVK+G+L+ELEENSLP+CESCLEGKMTKRPF+GKG+RAKEPLEL+HS
Subjt: SAAAIGT-------------------------------------------VEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHS
Query: DLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSE
DLC PMNVK RG +EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E I SQLS PG PQQNGVSE
Subjt: DLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSE
Query: RRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFY
RRNRTLLDMVRSM+SYA LP+SFWGYAV+TAVYILN VPSK+V ETP +LW+GRKGSL HFRIWGCPAHVL +N KKLEPRS+LCLFVG PK TRGG FY
Subjt: RRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFY
Query: DPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQI-RSQELGMPRRSGRTVRQPDRYKGLAETSVVAAND
DPK+N+ F EEDHI +H PRSKIVLNE+ + + SA + +S++ + Q L PRRSGR P RY L ET V ++
Subjt: DPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLNEMGDYIAK---EFFDGTSASMAFIDPSASSQI-RSQELGMPRRSGRTVRQPDRYKGLAETSVVAAND
Query: DCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
D EDPLT+ +AM DVDKDEWIKAM+ E+ESMYFNSVW+LVDQP+GVKPIGCKWIYKRKRG DGKV
Subjt: DCEDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
|
|
| A0A5D3BUN8 Gag/pol protein | 1.6e-218 | 61.27 | Show/hide |
Query: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
MSS+IIALL D+L G+NY +WK+ +N ILV D+ FVL EECP P AS+ VRD YDRW +AN+KA+++I+ASMSD+L+KKHE+MV+A++IM+SL+E
Subjt: MSSAIIALLASDKLVGDNYQSWKNNINTILVTDDIKFVLSEECPQMPGSTASRVVRDTYDRWIRANEKAKVYIIASMSDVLAKKHELMVSAKEIMESLQE
Query: MFGQQSFQVR------HDSLKYIFN-------ARMKEGS-------------------------SVREHVLDMMTRF--NLAEMNGAS--IDESSQGIDS
MFGQ S Q++ H +++ + + KEG +V EH ++ E GA+ + S Q S
Subjt: MFGQQSFQVR------HDSLKYIFN-------ARMKEGS-------------------------SVREHVLDMMTRF--NLAEMNGAS--IDESSQGIDS
Query: WQPLREDEVTLRVGSGELVSAAAIG----------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGY
++ L + E+TL+VG+G+++SA A+G + +LVK+GLLN+L++ SLP CESCLEGKMTKRPF+GKGYRAKEPLELIHSDLC PMNVK RGG+
Subjt: WQPLREDEVTLRVGSGELVSAAAIG----------TVEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGY
Query: EYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMM
EYF+SFIDDYSRYGY+YLM KSE LEKFKEYKTEVENLL K +K LRSDRGGEYMD FQDYMIEHGI SQLS PG PQQNGVSERRNRTLLDMVRSMM
Subjt: EYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMM
Query: SYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFHKCR
SYA+LP SFWGYAVETAV+ILNNVPSK+V ETPFELW GRK SL HFRIWGCPAHVLV+N KKLEPRSRLC FVG PKETRGGLF+DP+ENR
Subjt: SYARLPDSFWGYAVETAVYILNNVPSKNVCETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFHKCR
Query: FPEEDHIGDHLPRSKIVLNEMGDYIAKEFFDGTSASMAFIDPSASSQIR-SQELGMPRRSGRTVRQPDRYKGLAETSVVAANDDCEDPLTYNQAMVDVDK
F EEDH+ +H PRSK+VL+E D + D S + + S Q SQ L MPRRSGR V QP+RY GL ET VV +D EDPL+Y QAM DVDK
Subjt: FPEEDHIGDHLPRSKIVLNEMGDYIAKEFFDGTSASMAFIDPSASSQIR-SQELGMPRRSGRTVRQPDRYKGLAETSVVAANDDCEDPLTYNQAMVDVDK
Query: DEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
D+W+KAMD EMESMYFNSVWELVD P GVKPIGCKWIYKRKR GKV
Subjt: DEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.5e-40 | 37.13 | Show/hide |
Query: LLNELEENSLPVCESCLEGKMTKRPFSGKGYRA--KEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGK
LLN L E S +CE CL GK + PF + K PL ++HSD+C P+ YFV F+D ++ Y YL+ KS+ F+++ + E
Subjt: LLNELEENSLPVCESCLEGKMTKRPFSGKGYRA--KEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGK
Query: SLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCE---TPFELWSG
+ L D G EY+ E + + ++ GI+ L+VP PQ NGVSER RT+ + R+M+S A+L SFWG AV TA Y++N +PS+ + + TP+E+W
Subjt: SLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVCE---TPFELWSG
Query: RKGSLHHFRIWGCPAHVLVSNLK-KLEPRSRLCLFVG
+K L H R++G +V + N + K + +S +FVG
Subjt: RKGSLHHFRIWGCPAHVLVSNLK-KLEPRSRLCLFVG
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-64 | 32.88 | Show/hide |
Query: LVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENL
L K L++ + ++ C+ CL GK + F R L+L++SD+C PM ++ GG +YFV+FIDD SR ++Y++ K + + F+++ VE
Subjt: LVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENL
Query: LGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVC-ETPFELWS
G+ LK LRSD GGEY EF++Y HGI + +VPG PQ NGV+ER NRT+++ VRSM+ A+LP SFWG AV+TA Y++N PS + E P +W+
Subjt: LGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNVC-ETPFELWS
Query: GRKGSLHHFRIWGCP--AHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLN-----------------
++ S H +++GC AHV KL+ +S C+F+G E G +DP + + + F E + S+ V N
Subjt: GRKGSLHHFRIWGCP--AHVLVSNLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFHKCRFPEEDHIGDHLPRSKIVLN-----------------
Query: ----------EMGDYIAKEFFDGTSASMAFIDPSASSQIRSQELGMPRRSGRTVRQPDRYKGLAETSVVAANDDCEDPLTYNQAMVDVDKDEWIKAMDQE
E G+ + G + +Q Q + RRS R + RY T V +DD +P + + + +K++ +KAM +E
Subjt: ----------EMGDYIAKEFFDGTSASMAFIDPSASSQIRSQELGMPRRSGRTVRQPDRYKGLAETSVVAANDDCEDPLTYNQAMVDVDKDEWIKAMDQE
Query: MESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
MES+ N ++LV+ P G +P+ CKW++K K+ D K+
Subjt: MESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
|
|
| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 3.9e-20 | 28.64 | Show/hide |
Query: LVSAAAIGTVEKLVKSGLLNELEENSLP-------VCESCLEGKMTKRPFSGKGYRAK-----EPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGY
++ A +++K +K + L+E+ + C CL GK TK KG R K EP + +H+D+ P++ P+ YF+SF D+ +R+ +
Subjt: LVSAAAIGTVEKLVKSGLLNELEENSLP-------VCESCLEGKMTKRPFSGKGYRAK-----EPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGY
Query: IYLMHKKSE--TLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYA
+Y +H + E L F ++N + ++ DRG EY + + GIT+ + + +GV+ER NRTLL+ R+++ + LP+ W A
Subjt: IYLMHKKSE--TLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYA
Query: VETAVYILNNVPS
VE + I N++ S
Subjt: VETAVYILNNVPS
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-34 | 31.97 | Show/hide |
Query: CESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYM
C CL K K PFS + PLE I+SD+ + + Y Y+V F+D ++RY ++Y + +KS+ E F +K +EN + T SD GGE++
Subjt: CESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYM
Query: DTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNV-CETPFELWSGRKGSLHHFRIWGCPAH
+Y +HGI+ S P P+ NG+SER++R +++ +++S+A +P ++W YA AVY++N +P+ + E+PF+ G + R++GC +
Subjt: DTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNV-CETPFELWSGRKGSLHHFRIWGCPAH
Query: VLVS--NLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFH
+ N KL+ +SR C+F+G Y ++ LC H
Subjt: VLVS--NLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFH
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.5e-35 | 31.95 | Show/hide |
Query: LLNELEEN-SLPV---------CESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKT
+LN + N SLPV C C K K PFS + +PLE I+SD+ + + Y Y+V F+D ++RY ++Y + +KS+ + F +K+
Subjt: LLNELEEN-SLPV---------CESCLEGKMTKRPFSGKGYRAKEPLELIHSDLCAPMNVKPRGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKT
Query: EVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNV-CETP
VEN + TL SD GGE++ +DY+ +HGI+ S P P+ NG+SER++R +++M +++S+A +P ++W YA AVY++N +P+ + ++P
Subjt: EVENLLGKSLKTLRSDRGGEYMDTEFQDYMIEHGITSQLSVPGMPQQNGVSERRNRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNV-CETP
Query: FELWSGRKGSLHHFRIWGCPAHVLVS--NLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFH
F+ G+ + +++GC + + N KLE +S+ C F+G Y ++ LC H
Subjt: FELWSGRKGSLHHFRIWGCPAHVLVS--NLKKLEPRSRLCLFVGCPKETRGGLFYDPKENRCLCFH
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.7e-07 | 41.27 | Show/hide |
Query: EDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
++P TYN+A + W AMD E+ +M WE+ P KPIGCKW+YK K DG +
Subjt: EDPLTYNQAMVDVDKDEWIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDGKV
|
|
| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 6.2e-05 | 42.31 | Show/hide |
Query: VEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDL
+E LVK G L+ + +SL CE C+ GK + FS + K PL+ +HSDL
Subjt: VEKLVKSGLLNELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPLELIHSDL
|
|
| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 1.7e-07 | 35.37 | Show/hide |
Query: NRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNV-CETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSR
NRT+++ VRSM+ LP +F A TAV+I+N PS + P E+W + + R +GC A++ KL+PR++
Subjt: NRTLLDMVRSMMSYARLPDSFWGYAVETAVYILNNVPSKNV-CETPFELWSGRKGSLHHFRIWGCPAHVLVSNLKKLEPRSR
|
|
| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.4e-04 | 38.64 | Show/hide |
Query: WIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDG
W +AM +E++++ N W LV P +GCKW++K K DG
Subjt: WIKAMDQEMESMYFNSVWELVDQPNGVKPIGCKWIYKRKRGVDG
|
|
