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Tan0000079 (gene) of Snake gourd v1 genome

Gene IDTan0000079
OrganismTrichosanthes anguina (Snake gourd v1)
Description23 kDa subunit of oxygen evolving system of photosystem II
Genome locationLG02:64135838..64141360
RNA-Seq ExpressionTan0000079
SyntenyTan0000079
Gene Ontology termsGO:0009579 - thylakoid (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_009623821.1 uncharacterized protein LOC104114967 [Nicotiana tomentosiformis]4.3e-0751.52Show/hide
Query:  SYSLVELGAATTLVCDIFRNFSNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        S  LV L  ++T +C      S+ E +      SGI+NTKSWF+FY DG  IRV PQFEDLTEPE+
Subjt:  SYSLVELGAATTLVCDIFRNFSNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
XP_009797865.1 PREDICTED: uncharacterized protein LOC104244192 isoform X1 [Nicotiana sylvestris]3.6e-0649.3Show/hide
Query:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        S  LV L  ++T +C     F     S+ E +      SGI+NTKSWF+FY DG  IRV PQFEDLTEPE+
Subjt:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
XP_009797866.1 PREDICTED: uncharacterized protein LOC104244192 isoform X2 [Nicotiana sylvestris]3.6e-0649.3Show/hide
Query:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        S  LV L  ++T +C     F     S+ E +      SGI+NTKSWF+FY DG  IRV PQFEDLTEPE+
Subjt:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
XP_016491566.1 PREDICTED: uncharacterized protein LOC107811196 [Nicotiana tabacum]4.3e-0751.52Show/hide
Query:  SYSLVELGAATTLVCDIFRNFSNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        S  LV L  ++T +C      S+ E +      SGI+NTKSWF+FY DG  IRV PQFEDLTEPE+
Subjt:  SYSLVELGAATTLVCDIFRNFSNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
XP_019238528.1 PREDICTED: uncharacterized protein LOC109218604 [Nicotiana attenuata]3.6e-0649.3Show/hide
Query:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        S  LV L  ++T +C     F     S+ E +      SGI+NTKSWF+FY DG  IRV PQFEDLTEPE+
Subjt:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
TrEMBL top hitse value%identityAlignment
A0A067JI42 Uncharacterized protein1.8e-0637.78Show/hide
Query:  PHSPMSTEYRDICDFLDRIA-------TPSYSLVELGAATTLVCDIFRNFSNFEIRPSGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        P++ +    +  C FL+ ++       T S  ++ L     L   +    S  +   SGIANTKSWF+FY DG  IRV PQFED+ EPE+
Subjt:  PHSPMSTEYRDICDFLDRIA-------TPSYSLVELGAATTLVCDIFRNFSNFEIRPSGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
A0A1J6JV97 23 kDa subunit of oxygen evolving system of photosystem II1.8e-0649.3Show/hide
Query:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        S  LV L  ++T +C     F     S+ E +      SGI+NTKSWF+FY DG  IRV PQFEDLTEPE+
Subjt:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
A0A1S4BRS0 23 kDa subunit of oxygen evolving system of photosystem II2.1e-0751.52Show/hide
Query:  SYSLVELGAATTLVCDIFRNFSNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        S  LV L  ++T +C      S+ E +      SGI+NTKSWF+FY DG  IRV PQFEDLTEPE+
Subjt:  SYSLVELGAATTLVCDIFRNFSNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
A0A1S4CJP7 23 kDa subunit of oxygen evolving system of photosystem II1.8e-0649.3Show/hide
Query:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        S  LV L  ++T +C     F     S+ E +      SGI+NTKSWF+FY DG  IRV PQFEDLTEPE+
Subjt:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
A0A1S4CKB8 uncharacterized protein LOC107819812 isoform X21.8e-0649.3Show/hide
Query:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        S  LV L  ++T +C     F     S+ E +      SGI+NTKSWF+FY DG  IRV PQFEDLTEPE+
Subjt:  SYSLVELGAATTLVCDIFRNF-----SNFEIRP-----SGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G27390.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein1.7e-0662.5Show/hide
Query:  GIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE
        GIANTKSWF+++  G  IRV P FED+ EPE+
Subjt:  GIANTKSWFKFYDDGVFIRVAPQFEDLTEPEE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAGCGAACAATCCAACAAGAAAATGAAGCAGTTCGAACTCCTCCTCATTCTCCAATGTCTACAGAGTACAGAGATATCTGTGATTTTCTCGACCGGATTGCAAC
ACCTTCGTATTCTCTGGTTGAGTTAGGTGCAGCAACTACACTTGTTTGTGACATATTTAGAAATTTCTCCAACTTCGAAATAAGGCCTTCGGGAATAGCAAATACAAAGT
CTTGGTTCAAGTTCTACGATGATGGGGTTTTCATTCGGGTGGCTCCTCAGTTTGAAGACCTCACGGAGCCTGAGGAAATGGTTATAGAGCCCGATGGACTCGAATGA
mRNA sequenceShow/hide mRNA sequence
CTTAATTTACCAACAAGCTAATTCAGGCGTTTAAATTTAATTTCACCAACTGAATCTCTCTTTAGGGTTTCATTTTATTTTTTTTCTTGTTCCACTGCAACAAATTATAG
ATAAGATAGCATTTATTAATAGTATTTTTACAAAATGCTATTAAAGCTTCTAAAAATTTGCCGTGAAAAAAAGTGAGGGAACACATTTTAGATTTTGCGCCACTTTCTGT
ATTTCACCTTCATTCTCTTTCTCAATCACACGCAAATCACCCGAGAGTCACCTTCGTCGTTTTCTTCATCCTCCTTCACAGTTCTCTTCATCCTTCGTCGTTGTCTCTCT
TCGCACATCATCCTTCGTCGACCAGGGTGCTAGAGCAGGCGTTTTTCAGTTTCTCTTCGACCAACAATGACGAAGCGAACAATCCAACAAGAAAATGAAGCAGTTCGAAC
TCCTCCTCATTCTCCAATGTCTACAGAGTACAGAGATATCTGTGATTTTCTCGACCGGATTGCAACACCTTCGTATTCTCTGGTTGAGTTAGGTGCAGCAACTACACTTG
TTTGTGACATATTTAGAAATTTCTCCAACTTCGAAATAAGGCCTTCGGGAATAGCAAATACAAAGTCTTGGTTCAAGTTCTACGATGATGGGGTTTTCATTCGGGTGGCT
CCTCAGTTTGAAGACCTCACGGAGCCTGAGGAAATGGTTATAGAGCCCGATGGACTCGAATGAGCAAGGAAAAGAAATCATTTGGTTCAAGTACATGGTGATTATAACTC
ATTAAGCATATTTGTAAATGCTTCCTTATGTGAGTGTTTTGTGCAATAGGTAGTTTCTTAACAATAAATTCTTTTGCCCAAATTTTGCTACATTTGAAGTTGTTGATTTT
GAAATTTGTCATTAGCTTCCTATGTTCAATTTTATCAGGATTCCTTCTCCGTGAATTTGAGTTTCCTACTATATGTAATTTATATCTAATTTATGTTGGTCAATTATAAA
GGAGTGAACTATATGTTTGGTATAGTGTTACTTTTAGAGGTTTAAATGAAATGATGACCTCTTGTTAAGAAGAGAGAAGTTTAAAATTCTGTTGTTTCAATAATGAAATT
TTGCACATAGTTGAAATTTGGTTTTAAATGCACTAGCAATATATTGCATGAGTTATTTCTTCTTTCTTATGATAGTTATGTTAATTTTCTGTCCTGGGGTAGCACAGTGG
GGGTCCTTTTTTTCTTCTTCTAATAACATAGTTCCCTTCTTATGTTTAGTAGTTCCCATGAATTGAAGTTTCCCTAAATTTCTTTTTATAATTGGTAGCATGAAATGGAG
CAAGAGATGTCTGGACACCCAACTGGCAACTGCCCATTGTTAGCCAAAAGGAAATACATATAACAATCTTAACTCATTTTGGCCTTCATTTTACCTTTTAAAAATGCAAG
CTAATTGAATTGATTTTTCTAACTATTGGTTTGTGTGATAGTTGTCACTTATTTCCTTTATTTGTGCTCACTAATGAGAATATTATCTTAAAATTTTTTAGTCTTAGAAT
AACATATGAACATATAAATGTAGAGTCAGAATAAATCATGCATGAGAAATAGGGAGAGTCTCAACATCTTATCACTTTATGCTTGAAAAATTGTTATGGCCTCCATGATA
TCATATTCTTCTATTGTAATTCACCTATGTTGTCTTTATCCCAAATGGAAGTCGTAGTTTGGTTAATGTGGATATAGAAGTGTAATCTTCTTTTACCAATAGGTGCTAGG
TAACATTTTTGGTATTGTTGTGGTTACGTCGTTATATTGTCAAAATTTTCGGAGCATAGAGGTTGTTAGCTTAGTGAATGATTAGGTTGTTAGCTTGTTAGAAAAGAGTA
GAGCCTCGTTAAAATACAATTGTAGTTGGTCATGTTTACTTGCAGGCTAGTTATTGGAGTGTTGCTTCCTTCTTAAAAAGTTTAAGCTTGAGTGAATGATATCTTAGGTC
TATTATTTGTGTTGAAATTGTAACAATAGACATTTAGGTTACTACCTTGTGGATTGTGTTTGTTAGAAATTAATGATTTGTCTAGTACTTTAGTTTTAGATTGTTGGTTC
ATTTTGTGAAACTTTCCTAACTTATGAGTTTAAGTTACATATTTAAATTGAAGTATTTTGTTTTAGATATCTAATTTCCATATCTATATTTGCAAGTATAATAGTGTTTG
TTTTTTGTATTTTATATATGAGAACTATGTTCGAGTTATCTTTGAACATCATATTAAGTAGATTACAAAGAAAAAGAGACTATGCTTATAAATAATAACAACTTTGTGAG
TAGACTGTCATTTAGGTATGTTCAACAGATTTGCGCTTGTTCATCAAGATTCTCTTCGATCAGACGAGGTTTGACTCTTATCATGCCCAATCAATATAAGTTCTTGGAAG
TCAAACTTGAGATAAAAACTTGTTAGAAGTTGGGAGGTTGACTCCTAAGTTTCTTTGCATAAACTCAATAGATAATAGAGTTTAAGGAGTAGTGTTCGAAATTTGAGCAG
GGATTGTTTGAAGGTCTGAAAGCGTATAGGAAAGAAGATGGAGGTCTTCTTCTCTTTCATCCACACCAAAATGCTCTTCATATGAGGATTGGTGCTGAATGAATCTGTAT
GCCGTCACCCTCTATTGAACAATTTATTGATGTTGTCACTTACCTCATTGAAGGCCTTGTTCGTGAAGGTTCTTACAACGCCCATATCTGCGCTCTGCAATTGTGAGTTC
ATCTTCTTTCTTTTTATCCTTCTTTTTTTGTGGATTGGATTTATCTTTTGGCTACTTGAGGTTTTACTTAGGTGTCCTTGCTGGAGCAAGGGAGGCATTGATTTGTGGTG
TACCATCCATATGATCGTTCTTCGCAAAATGATGTTATACTTATTATGTTTGTGTAACTTTTGTGAGTTAGTAAAGTTAGTTTTAGTTTTTGTAATCGAATTTATTGTTT
GTTCGAGTGTTGTTAGTAGTTGAGTTTTTAGATGCTATGTTAATGAATTTTGAGAAGTATTAGCTAAGTTTTAAGAAAAGCACGAGTTCTAGTTCCAAGGTTGATGTGGA
GGAGCTCCTACCATACTCTCATGGGTTTACTGATCTGAACTTTTACTGAAATAATGGAATGGCTTGGACTGGTGTTTATTGGGATGAGCTTGCTGCAAATTGCAAGTCTA
AGACCAATTTTTGGTGCTTATAGCCATTACTGATATTTTCATAGTCACGTGTAGTCTAGAACTTTTTAATGTTTCAGCGAACCATTTTGAGTTGATATTTTTCCATTTCC
TCAATTTGAATTATGAGTTATCTAAGCCTTCACCATTGTTACTAACATAATAATCTTGTCATCTTTCAAGAATATCTATTGTGATGCAAGGGTCAAAGATTGTCAATGCA
CAAATCATAGCTTGATTTTAGCTTGATTGTCAGGGCCTATCCAGTGAAGATGAATGTCATTATATTTTTGCATTGTTCTGATGGATAAGATTGATGAATGTCAAATAAGG
CCAGAACGAGAAAAGGAAAATCATTCTTGCATTTAAATACATGGATACTAATCTGAAAATTCATCAAGAGTTTCCGTCATATGGGAGAACGCAATCCCTTTCAAGGTTGA
TGAAAGAATATCATTGGAAGCTCTTGGCCACAAACAACTAGCTTAAGTTATATATTTTGATTTTGAATTGTGATAATTTTGTAATTTAATGAATAGTGATGGAAAGAGTT
AATATTTTGTACCATTCCTAGTTGATGATATTCATTATATATCTATTTTTGTGGAACAATAAATTGAAAAGTTTTATGTTTTGTATCAACTCTAAGTGGGGCAATGTAAG
TCTTGAATGAATGTTTGCTTAGACAAAGACAAA
Protein sequenceShow/hide protein sequence
MTKRTIQQENEAVRTPPHSPMSTEYRDICDFLDRIATPSYSLVELGAATTLVCDIFRNFSNFEIRPSGIANTKSWFKFYDDGVFIRVAPQFEDLTEPEEMVIEPDGLE