; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000092 (gene) of Snake gourd v1 genome

Gene IDTan0000092
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationLG09:65913620..65914414
RNA-Seq ExpressionTan0000092
SyntenyTan0000092
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150016.3 zinc finger Ran-binding domain-containing protein 2 isoform X2 [Cucumis sativus]8.7e-8597.86Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTE LAGDWYCT VSCGAHNYASRPNCFRCGAFKSVYPGDYGAYM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

XP_008465021.2 PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo]8.7e-8597.86Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTE LAGDWYCT VSCGAHNYASRPNCFRCGAFKSVYPGDYGAYM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

XP_022961068.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata]1.6e-8395.71Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDW+CPR+GCG+HNYASRMECFKCKTPR FGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

XP_023516205.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]3.6e-8395Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEVLAGDWYCTAV+CGAHNYASRPNCFRCGAFKSVYPGDYGAYM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDW+CPR+GCG+HNYASRMECFKCKTPR FGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

XP_038880145.1 zinc finger Ran-binding domain-containing protein 2-like isoform X2 [Benincasa hispida]5.6e-8497.14Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTE LAGDWYCT  SCGAHNYASRPNCFRCGAFKSVYPGDYGAYM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

TrEMBL top hitse value%identityAlignment
A0A0A0LWE1 Uncharacterized protein4.2e-8597.86Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTE LAGDWYCT VSCGAHNYASRPNCFRCGAFKSVYPGDYGAYM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

A0A1S3CMY6 uncharacterized protein LOC103502740 isoform X24.2e-8597.86Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTE LAGDWYCT VSCGAHNYASRPNCFRCGAFKSVYPGDYGAYM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

A0A5D3E0T0 Zinc finger Ran-binding domain-containing protein 2-like isoform X34.2e-8597.86Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTE LAGDWYCT VSCGAHNYASRPNCFRCGAFKSVYPGDYGAYM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

A0A6J1HCX6 zinc finger Ran-binding domain-containing protein 2-like7.9e-8495.71Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDW+CPR+GCG+HNYASRMECFKCKTPR FGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

A0A6J1JBM0 zinc finger Ran-binding domain-containing protein 2-like7.9e-8495.71Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDW+CPR+GCG+HNYASRMECFKCKTPR FGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

SwissProt top hitse value%identityAlignment
O95218 Zinc finger Ran-binding domain-containing protein 23.2e-0534.48Show/hide
Query:  GDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+    +      G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q19QU3 Zinc finger Ran-binding domain-containing protein 23.2e-0534.48Show/hide
Query:  GDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+    +      G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q5R580 Zinc finger Ran-binding domain-containing protein 23.2e-0534.48Show/hide
Query:  GDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+    +      G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 26.4e-0635.63Show/hide
Query:  GDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+    +      G  + G   A    G + + DW C    CG  N+A R EC  C TP+
Subjt:  GDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q9R020 Zinc finger Ran-binding domain-containing protein 23.2e-0534.48Show/hide
Query:  GDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+    +      G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Arabidopsis top hitse value%identityAlignment
AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein3.6e-0426.51Show/hide
Query:  GDWICNVCQNVNFKKREACHRCG-YPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRC---GAFKSVYPGDY
        GDW C  C+ +NF K   C RC  + +           +   +  GDW C   +C   N++    C RC      + + PG++
Subjt:  GDWICNVCQNVNFKKREACHRCG-YPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRC---GAFKSVYPGDY

AT2G17975.1 zinc finger (Ran-binding) family protein2.6e-1835.57Show/hide
Query:  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSV-------YPG----------------
        GDW C  C+N N+  R  C+RC  P+    D +T   +K     GDW CT   C  +NYASR  C +CG  K V        PG                
Subjt:  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSV-------YPG----------------

Query:  -DYGAYMVGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKC
         D    ++      + AS+   W+SGDWIC    CG HNY+SR++C KC
Subjt:  -DYGAYMVGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKC

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein2.3e-5967.14Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGD-YGAYMVGSDQYGSD-A
        MSW+ GDW+C  CQ+ NFKKRE+C +CGYPK+GG D STY YN+TEV+AGDWYC A++CG+HNYASR +C+RCG  K  Y    YGA MV    YG+D A
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGD-YGAYMVGSDQYGSD-A

Query:  SIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGG
        + PPGWK+GDW+CPR+GCGVHNYASR ECFKCKT RD+GG
Subjt:  SIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGG

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein2.6e-3443.51Show/hide
Query:  GDWICNVCQNVNFKKREACHRCG-------------YPKYGGPDPSTYSYNK-TEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMVG
        GDW C  C ++NF++R++C RCG             +  +GG   S + +   ++V  GDWYCT  +CG HN+ASR  CF+CG FK     G  G  + G
Subjt:  GDWICNVCQNVNFKKREACHRCG-------------YPKYGGPDPSTYSYNK-TEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMVG

Query:  SDQYGSD--ASIPPG------WKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
           + +D   S  PG      WKSGDWIC R+GC  HN+ASRMECF+C  PRDF
Subjt:  SDQYGSD--ASIPPG------WKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein1.2e-3137.74Show/hide
Query:  GDWICNVCQNVNFKKREACHRCGYPKYGG------------PDPSTYSYNK-TEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGD---------
        GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +V  GDWYC    CG HN+A+R +CF+CGA K  +            
Subjt:  GDWICNVCQNVNFKKREACHRCGYPKYGG------------PDPSTYSYNK-TEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGD---------

Query:  -------YGAYMVGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD
                G +  G    G   +    WKSGDWICPR GC  HN+ASR ECF+C  P++
Subjt:  -------YGAYMVGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTGGTCAGCAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAGAAAAGAGAAGCATGCCATCGTTGCGGTTACCCCAAGTATGGAGGCCCAGACCC
TTCAACTTACAGTTACAACAAGACGGAGGTGTTGGCCGGAGACTGGTACTGCACTGCCGTCAGCTGCGGAGCTCACAATTACGCCAGCCGCCCGAACTGCTTTAGATGTG
GTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGGTGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATT
TGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTGGTGCAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTGGTCAGCAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAGAAAAGAGAAGCATGCCATCGTTGCGGTTACCCCAAGTATGGAGGCCCAGACCC
TTCAACTTACAGTTACAACAAGACGGAGGTGTTGGCCGGAGACTGGTACTGCACTGCCGTCAGCTGCGGAGCTCACAATTACGCCAGCCGCCCGAACTGCTTTAGATGTG
GTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGGTGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATT
TGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTGGTGCAGTTTAA
Protein sequenceShow/hide protein sequence
MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMVGSDQYGSDASIPPGWKSGDWI
CPRMGCGVHNYASRMECFKCKTPRDFGGAV