; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000104 (gene) of Snake gourd v1 genome

Gene IDTan0000104
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHTH myb-type domain-containing protein
Genome locationLG07:73317959..73318812
RNA-Seq ExpressionTan0000104
SyntenyTan0000104
Gene Ontology termsGO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0043229 - intracellular organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF35835.1 conserved hypothetical protein [Ricinus communis]8.8e-1149.45Show/hide
Query:  MKVL-GFSLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSCSSS---LRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH
        MK+L G S+ K QF++ G RIA + S+I+ +G+ +N    SC      LR L+ KF++QWK  L W +R +V+YSYD+ SYSLNFDDGL H
Subjt:  MKVL-GFSLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSCSSS---LRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH

KAE7997876.1 hypothetical protein FH972_002472 [Carpinus fangiana]2.3e-1158.02Show/hide
Query:  SLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSC---SSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDG
        SL + QFL+LG RIA+SG S + +G  K    L C   S +LR L+ KFKSQWK  L WQ+ R VQYSYD  SYSLNFDDG
Subjt:  SLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSC---SSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDG

KAG6606355.1 hypothetical protein SDJN03_03672, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3491.95Show/hide
Query:  MKVLGFSLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSCSSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH
        MKVLGFSLWKWQFLRLGNRIANSGSSISYVGD K PP LSCSSSLRHLILK K QWKHNLR QK RTVQYSYDLQSYSLNFDDGLLH
Subjt:  MKVLGFSLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSCSSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH

KGN58293.1 hypothetical protein Csa_017624 [Cucumis sativus]7.4e-2671.58Show/hide
Query:  MKVLGFSLWKWQFLRLGNRIANSGSSIS----YVGDPKNPPSLSCSS---SLRHLILKFKSQWK-HNLRWQKRRTVQYSYDLQSYSLNFDDGLLH
        MK LGFSLWKWQF++LGNRIANSGSS S     V D + PP   CSS   S +HLILK KSQWK HNLRWQ   TV+YSYDLQSYSLNFDDGLLH
Subjt:  MKVLGFSLWKWQFLRLGNRIANSGSSIS----YVGDPKNPPSLSCSS---SLRHLILKFKSQWK-HNLRWQKRRTVQYSYDLQSYSLNFDDGLLH

XP_002526557.2 uncharacterized protein LOC8266481 [Ricinus communis]8.8e-1149.45Show/hide
Query:  MKVL-GFSLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSCSSS---LRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH
        MK+L G S+ K QF++ G RIA + S+I+ +G+ +N    SC      LR L+ KF++QWK  L W +R +V+YSYD+ SYSLNFDDGL H
Subjt:  MKVL-GFSLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSCSSS---LRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH

TrEMBL top hitse value%identityAlignment
A0A0A0L8W7 Uncharacterized protein3.6e-2671.58Show/hide
Query:  MKVLGFSLWKWQFLRLGNRIANSGSSIS----YVGDPKNPPSLSCSS---SLRHLILKFKSQWK-HNLRWQKRRTVQYSYDLQSYSLNFDDGLLH
        MK LGFSLWKWQF++LGNRIANSGSS S     V D + PP   CSS   S +HLILK KSQWK HNLRWQ   TV+YSYDLQSYSLNFDDGLLH
Subjt:  MKVLGFSLWKWQFLRLGNRIANSGSSIS----YVGDPKNPPSLSCSS---SLRHLILKFKSQWK-HNLRWQKRRTVQYSYDLQSYSLNFDDGLLH

A0A2N9IXX4 Uncharacterized protein5.6e-1155.7Show/hide
Query:  QFLRLGNRIANSGSSISYVGDPKNPPSLSC---SSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH
        QF +LG RIA++GS+ S +G  K   SL C   S  LR L+ KFKSQWK   R ++R + QYSYDL SYSLNFDDGL +
Subjt:  QFLRLGNRIANSGSSISYVGDPKNPPSLSC---SSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH

A0A5N6QEZ1 Uncharacterized protein1.1e-1158.02Show/hide
Query:  SLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSC---SSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDG
        SL + QFL+LG RIA+SG S + +G  K    L C   S +LR L+ KFKSQWK  L WQ+ R VQYSYD  SYSLNFDDG
Subjt:  SLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSC---SSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDG

A0A6A1VJQ4 Uncharacterized protein9.5e-1154.32Show/hide
Query:  SLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSC---SSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDG
        SL + +FL+L  RIA++GS+++ V   K    L C   S+ LR L+ KFKS WK NL WQ R   QYSYDL SYSLNFDDG
Subjt:  SLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSC---SSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDG

B9SKN8 Uncharacterized protein4.3e-1149.45Show/hide
Query:  MKVL-GFSLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSCSSS---LRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH
        MK+L G S+ K QF++ G RIA + S+I+ +G+ +N    SC      LR L+ KF++QWK  L W +R +V+YSYD+ SYSLNFDDGL H
Subjt:  MKVL-GFSLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSCSSS---LRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G44005.1 unknown protein2.2e-0737.65Show/hide
Query:  SLWKWQFLRLGNRIANSGSSISYVGDPKNPP----SLSCSSSLRHLILKFKSQWKHNLRWQKR---RTVQYSYDLQSYSLNFDDG
        SL + QF R G RI +S ++ + +G+ +       + SC    R L+ +F  + K  LRW ++     +Q SYDL+SY LNFDDG
Subjt:  SLWKWQFLRLGNRIANSGSSISYVGDPKNPP----SLSCSSSLRHLILKFKSQWKHNLRWQKR---RTVQYSYDLQSYSLNFDDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTTTTAGGCTTTAGTTTGTGGAAATGGCAATTCTTAAGGCTTGGGAACAGAATAGCAAATTCTGGGTCTTCAATTTCTTATGTGGGTGATCCAAAAAACCCACC
TTCTTTGAGCTGTTCATCTTCTTTGAGACATTTGATTTTGAAGTTCAAATCTCAGTGGAAGCACAACTTGAGATGGCAAAAGAGAAGAACAGTTCAGTACAGTTATGATC
TTCAAAGCTATTCTCTTAACTTTGATGATGGCTTGCTTCATTGA
mRNA sequenceShow/hide mRNA sequence
CGAAAGGCCCCAACTTTTTTCCCCTTAGTGCGGTTGGCGTTACTAATGATTCTGACATTACCTCATTTCAACTCAGTCCTTCAATACCTTCTCAGCAAATTTGGGACCAA
CTCTGTCCTCAACTGCAAAAAAAGAAAAAACCATTTCGTTTCTCACTGTTCTTCTTCTTCAAAATCTCTTCTTCCTTTTGAGTTTTCCCTTCATTTTCTGAAATTCTCTC
CAATTCTTTAAGGCCTCAAAATGAAAGTTTTAGGCTTTAGTTTGTGGAAATGGCAATTCTTAAGGCTTGGGAACAGAATAGCAAATTCTGGGTCTTCAATTTCTTATGTG
GGTGATCCAAAAAACCCACCTTCTTTGAGCTGTTCATCTTCTTTGAGACATTTGATTTTGAAGTTCAAATCTCAGTGGAAGCACAACTTGAGATGGCAAAAGAGAAGAAC
AGTTCAGTACAGTTATGATCTTCAAAGCTATTCTCTTAACTTTGATGATGGCTTGCTTCATTGAATTTTGATTTTCATTTTATTTCTCTCTGTTTTTGTGCTGATTTTCT
CTTTCTTTCTTTCTTTCTCTCTCATACCCATTTCTGTAAATTGTCAAATAATGAAGAGTCTTTCATGGGTTCTTACCAAAAAGAAGAACTATAAAATGGGTCTGTTTTGC
AATTTTCTTAGAGACTTGTTTGGGAGATAAAGAGGTTTTTTTTTTTTTTTTGTTCATGTAATTAACTCTGAGATTTGGTTTTTACATATACTTAGCTACTTCTTCTCTGC
CTTCCAATTATTATTAGATTTCCAAAGTGCTTGAAAACTTTGTTAATTTCGTCCAATTTTGTTGCTGTTAAATTACTTCTGCCA
Protein sequenceShow/hide protein sequence
MKVLGFSLWKWQFLRLGNRIANSGSSISYVGDPKNPPSLSCSSSLRHLILKFKSQWKHNLRWQKRRTVQYSYDLQSYSLNFDDGLLH