; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000128 (gene) of Snake gourd v1 genome

Gene IDTan0000128
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG10:25319110..25321941
RNA-Seq ExpressionTan0000128
SyntenyTan0000128
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038281.1 hypothetical protein E6C27_scaffold270G001410 [Cucumis melo var. makuwa]6.5e-0533.88Show/hide
Query:  SDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPIIINDVLEKISIKREVSV
        SD+ S EE      +C G     C S+INV+++DQE L +L++++PDE+ + T L +LR S+  E  + +K   + I+     I+N +  K  +KR + V
Subjt:  SDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPIIINDVLEKISIKREVSV

Query:  QDLQFEINNLKEEVSNLRREI
        +DL  E+  LK EV++ ++ +
Subjt:  QDLQFEINNLKEEVSNLRREI

KAF5803680.1 putative transcription factor interactor and regulator CCHC(Zn) family [Helianthus annuus]6.5e-0529.03Show/hide
Query:  MAFGSDSSSHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTD
        + + + S ++    +D+ L   E+S++ SS E  M   EC G  +C     IN L+E+ + L EL++K+ D+ +++  LKQL+   K  ++ E+K     
Subjt:  MAFGSDSSSHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTD

Query:  ILDITPIIINDVLEKISIKR----EVSVQDLQFEINNLKEEVSNLRREIRKELTK
                 N++ ++   K+     V++ DLQ E+ N+KEE+  ++ +I KEL K
Subjt:  ILDITPIIINDVLEKISIKR----EVSVQDLQFEINNLKEEVSNLRREIRKELTK

KYP75455.1 polyprotein [Cajanus cajan]8.4e-0531.84Show/hide
Query:  SSHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPI
        S + ES+N++   + E  +T S E+ E    EC     C+C   INV+S  ++L+LE+VDK+P+E  +   L +L+N + ++   E+    T   + +  
Subjt:  SSHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPI

Query:  IINDVLEKISIK-REVSVQDLQFEINNLKEEVSNLRREIRKELTKVNSEVAILKKGKQKVVEIQE-PHVSVDEQTERKI
          + +L++ SIK + +++QDLQ E+  LKEEV    + I+ +LTKV SE ++  +  + ++E +E P  S ++ T  K+
Subjt:  IINDVLEKISIK-REVSVQDLQFEINNLKEEVSNLRREIRKELTKVNSEVAILKKGKQKVVEIQE-PHVSVDEQTERKI

KYP77324.1 Enzymatic polyprotein [Cajanus cajan]6.5e-0531.06Show/hide
Query:  SHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPII
        S SE    D  +  E  +T S E+ E    EC     C C   INV++ + +L+LE++DK+P+E  +   L +L++ +   ++D+ ++   D  + +   
Subjt:  SHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPII

Query:  INDVLEKISIK-REVSVQDLQFEINNLKEEVSNLRR---EIRKELTKVNSEV-AILKKGKQ
         + +++K++IK + V ++DLQ EIN LKEE++ ++    EI++E  + N  + AIL+K  Q
Subjt:  INDVLEKISIK-REVSVQDLQFEINNLKEEVSNLRR---EIRKELTKVNSEV-AILKKGKQ

XP_022933039.1 uncharacterized protein LOC111439730 [Cucurbita moschata]3.8e-0543.02Show/hide
Query:  ESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKR
        +S+  +ILEL+EESD+YSS E   ++ E +G R C     INVL++DQE+LLE+V+KV D  I++ I ++LR+++      E+++R
Subjt:  ESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKR

TrEMBL top hitse value%identityAlignment
A0A151RZ33 Enzymatic polyprotein4.1e-0528.57Show/hide
Query:  SHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPII
        S SE  ++  +E  + +DT S E+ E    EC     C+C   INV++   +L+LE+V+K+P+E  +   L +L++ +   ++D+  + +T   + +   
Subjt:  SHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPII

Query:  INDVLEKISIK-REVSVQDLQFEINNLKEEVSNLRREIRKELTKVNSEVAILKKGKQKVVEIQEPHVSVDEQTERKIIPRHK
         + +L+K SIK + V+++DLQ EIN+LK EV+     I+ +L ++  E     +  ++++E  +P +S +  T+ K +  +K
Subjt:  INDVLEKISIK-REVSVQDLQFEINNLKEEVSNLRREIRKELTKVNSEVAILKKGKQKVVEIQEPHVSVDEQTERKIIPRHK

A0A151U814 Polyprotein4.1e-0531.84Show/hide
Query:  SSHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPI
        S + ES+N++   + E  +T S E+ E    EC     C+C   INV+S  ++L+LE+VDK+P+E  +   L +L+N + ++   E+    T   + +  
Subjt:  SSHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPI

Query:  IINDVLEKISIK-REVSVQDLQFEINNLKEEVSNLRREIRKELTKVNSEVAILKKGKQKVVEIQE-PHVSVDEQTERKI
          + +L++ SIK + +++QDLQ E+  LKEEV    + I+ +LTKV SE ++  +  + ++E +E P  S ++ T  K+
Subjt:  IINDVLEKISIK-REVSVQDLQFEINNLKEEVSNLRREIRKELTKVNSEVAILKKGKQKVVEIQE-PHVSVDEQTERKI

A0A151UDE4 Enzymatic polyprotein3.1e-0531.06Show/hide
Query:  SHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPII
        S SE    D  +  E  +T S E+ E    EC     C C   INV++ + +L+LE++DK+P+E  +   L +L++ +   ++D+ ++   D  + +   
Subjt:  SHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPII

Query:  INDVLEKISIK-REVSVQDLQFEINNLKEEVSNLRR---EIRKELTKVNSEV-AILKKGKQ
         + +++K++IK + V ++DLQ EIN LKEE++ ++    EI++E  + N  + AIL+K  Q
Subjt:  INDVLEKISIK-REVSVQDLQFEINNLKEEVSNLRR---EIRKELTKVNSEV-AILKKGKQ

A0A6J1EYM2 uncharacterized protein LOC1114397301.8e-0543.02Show/hide
Query:  ESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKR
        +S+  +ILEL+EESD+YSS E   ++ E +G R C     INVL++DQE+LLE+V+KV D  I++ I ++LR+++      E+++R
Subjt:  ESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKR

A5AL87 Uncharacterized protein4.1e-0530.32Show/hide
Query:  SDSSSHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCY-SYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILD
        SDS S ++S N+D +   + S   SS+     D+  +G   CNC    INV+S+DQE +L+ + KV DE  ++ + +  + S+   VK E KK       
Subjt:  SDSSSHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCY-SYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILD

Query:  ITPIIINDVLEKISIK--REVSVQDLQFEINNLKEEVSNLRREIRKELTKVNSEV
        + P  +ND+L +   +  ++VS+++L  E+   K+E+  LR+ I   L+ +  ++
Subjt:  ITPIIINDVLEKISIK--REVSVQDLQFEINNLKEEVSNLRREIRKELTKVNSEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTCGGTTCAGATTCTAGCAGCCATTCAGAAAGCACTAACGACGACATCCTCGAACTGAGAGAAGAATCGGATACATATTCATCAGAAGAAGGAGAAATGCATGA
TCTTGAATGTCAGGGAGGACGGTTATGCAACTGCTACAGCTACATAAATGTTCTCAGTGAAGATCAAGAGCTACTCCTAGAACTCGTGGACAAAGTACCTGATGAACACA
TTAGAGAAACAATTCTCAAACAACTTCGAAACTCTCTCAAGAAAGAAGTTAAAGATGAAAAGAAGAAAAGAACTACAGACATCCTAGACATTACCCCAATAATAATCAAC
GATGTATTGGAAAAAATCAGTATCAAAAGAGAAGTTTCAGTACAAGACCTACAATTTGAAATCAACAACCTGAAGGAAGAAGTTTCAAACCTCAGAAGAGAAATCAGAAA
AGAACTTACTAAGGTAAATTCTGAAGTAGCCATACTCAAAAAGGGAAAACAAAAGGTAGTAGAAATTCAAGAACCACATGTCTCAGTTGATGAACAGACCGAGAGGAAGA
TCATCCCCAGGCATAAGCATAAGAGAACCTCTGGAGTCATCAATTCCGACTCAAACTCCACCACGACCATCGGCCAATCTTACCCGTCAGAGAAGACGACCTGTCTCTCC
GACAACATCTGTACAAAGCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATTCGGTTCAGATTCTAGCAGCCATTCAGAAAGCACTAACGACGACATCCTCGAACTGAGAGAAGAATCGGATACATATTCATCAGAAGAAGGAGAAATGCATGA
TCTTGAATGTCAGGGAGGACGGTTATGCAACTGCTACAGCTACATAAATGTTCTCAGTGAAGATCAAGAGCTACTCCTAGAACTCGTGGACAAAGTACCTGATGAACACA
TTAGAGAAACAATTCTCAAACAACTTCGAAACTCTCTCAAGAAAGAAGTTAAAGATGAAAAGAAGAAAAGAACTACAGACATCCTAGACATTACCCCAATAATAATCAAC
GATGTATTGGAAAAAATCAGTATCAAAAGAGAAGTTTCAGTACAAGACCTACAATTTGAAATCAACAACCTGAAGGAAGAAGTTTCAAACCTCAGAAGAGAAATCAGAAA
AGAACTTACTAAGGTAAATTCTGAAGTAGCCATACTCAAAAAGGGAAAACAAAAGGTAGTAGAAATTCAAGAACCACATGTCTCAGTTGATGAACAGACCGAGAGGAAGA
TCATCCCCAGGCATAAGCATAAGAGAACCTCTGGAGTCATCAATTCCGACTCAAACTCCACCACGACCATCGGCCAATCTTACCCGTCAGAGAAGACGACCTGTCTCTCC
GACAACATCTGTACAAAGCTCTAG
Protein sequenceShow/hide protein sequence
MAFGSDSSSHSESTNDDILELREESDTYSSEEGEMHDLECQGGRLCNCYSYINVLSEDQELLLELVDKVPDEHIRETILKQLRNSLKKEVKDEKKKRTTDILDITPIIIN
DVLEKISIKREVSVQDLQFEINNLKEEVSNLRREIRKELTKVNSEVAILKKGKQKVVEIQEPHVSVDEQTERKIIPRHKHKRTSGVINSDSNSTTTIGQSYPSEKTTCLS
DNICTKL