; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000136 (gene) of Snake gourd v1 genome

Gene IDTan0000136
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG01:62922949..62942616
RNA-Seq ExpressionTan0000136
SyntenyTan0000136
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579028.1 hypothetical protein SDJN03_23476, partial [Cucurbita argyrosperma subsp. sororia]2.3e-0546.34Show/hide
Query:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSD-----QKRK
        +F RL RFAPE+VDT++K   RFVMGL +GIRG V  Q+   YASA  V       A +L + +   +QP  D     QKRK
Subjt:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSD-----QKRK

XP_022156662.1 uncharacterized protein LOC111023512 [Momordica charantia]5.6e-0753.97Show/hide
Query:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQV
        EFT+L RFAPELVDTEA K +RF++ L +  +GFV   SPP YA+A+R   LI  ++ S  QV
Subjt:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQV

XP_022934554.1 uncharacterized protein LOC111441700 [Cucurbita moschata]1.4e-0543.68Show/hide
Query:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSD---QKRKWDQKGSN
        EF++L RFAPELV+T+ K  ++FV+GLD  IR  V+A SP  YA+A+R        A    +   +S +PPS    QKR+ DQ   N
Subjt:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSD---QKRKWDQKGSN

XP_038880159.1 uncharacterized protein LOC120071839 [Benincasa hispida]4.6e-0946.51Show/hide
Query:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSDQKRKWDQKGSNPS
        +FTRL  FAP+LV TEAK+ +RFV GL + +RG VQA  PP YA+A R    +G  +  ++     + +P S QKRK +QK   PS
Subjt:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSDQKRKWDQKGSNPS

XP_038891712.1 uncharacterized protein LOC120081110 [Benincasa hispida]5.6e-0745.88Show/hide
Query:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSDQKRKWDQKGSNP
        EF  L RFAPELV TEA + +RF+ GL E IRG VQA  P  +  A+R+   +  Q+     +V  +  P S QKRK DQK   P
Subjt:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSDQKRKWDQKGSNP

TrEMBL top hitse value%identityAlignment
A0A6J1DSJ6 uncharacterized protein LOC1110235122.7e-0753.97Show/hide
Query:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQV
        EFT+L RFAPELVDTEA K +RF++ L +  +GFV   SPP YA+A+R   LI  ++ S  QV
Subjt:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQV

A0A6J1F2Y2 uncharacterized protein LOC1114417006.6e-0643.68Show/hide
Query:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSD---QKRKWDQKGSN
        EF++L RFAPELV+T+ K  ++FV+GLD  IR  V+A SP  YA+A+R        A    +   +S +PPS    QKR+ DQ   N
Subjt:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSD---QKRKWDQKGSN

A0A6J1FB78 uncharacterized protein LOC1114438453.3e-0540.45Show/hide
Query:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSDQKRKWDQKGSNPSIIS
        EFTRL RFAP +V  E  K + FVMGL   IRG V    PP YA+A+++ E + V+    +    + +    DQKRK +Q     S +S
Subjt:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSDQKRKWDQKGSNPSIIS

A0A6J1FEV9 uncharacterized protein LOC1114450785.6e-0545.12Show/hide
Query:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSD-----QKRK
        +F RL RFAPE+VDT++K   RFVMGL +GIRG V  Q+   YASA  V       A +L + +   + P  D     QKRK
Subjt:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSD-----QKRK

A0A6J1JYP6 uncharacterized protein LOC1114890802.5e-0545.12Show/hide
Query:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSD-----QKRK
        +F RL RFAPE+VDT++K   RFVMGL +GIRG V  Q+   Y+SA  V       A +L + +   +QP  D     QKRK
Subjt:  EFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSD-----QKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCACAAGACTGATGCGTTTTGCTCCAGAACTGGTGGACACCGAGGCTAAGAAGACAAAACGATTCGTTATGGGTCTAGATGAGGGTATTCGGGGTTTCGTACA
GGCACAATCACCCCCATATTATGCTTCAGCAGTGAGAGTAGAAGAGTTGATTGGTGTTCAGGCCCTGAGTTTACAACAGGTTGTGGTTAACTCAAGTCAGCCCCCTTCGG
ACCAGAAAAGGAAGTGGGATCAGAAGGGTTCTAACCCCAGCATTATCAGCAATCTTCGAAACCATCGAGCAATTCACGTTCCACTCCTAGTCAGGGGAACCCGTTTCGAT
CAGGGAAGGATAGTGGTGAGAAACCACGTTGTGTGGAATGCAGAAGATATCATTGAGGCAAGTGTTTGTCTCACTCTGGGGAATGCTTTAGATGCAAGAAAGAGGTTCAC
AAAGCAAAAAATTGTCTCAATCAAAGTGTCAGGGATGAATTATTTAATAACAATATGCATTCTCAATCAAAGTGTCAACGCTGTGCCGATTACTCCTATAAATAGAACAT
GA
mRNA sequenceShow/hide mRNA sequence
TTCGCGACAACACCATTTAAGGTTGATATAAACTCGTACGCCCATATTGGAGGAGTGAGATTGTAAGCAAGACCAACGTAACATACGGGGATAGCATCGTCGCATATTTT
CTTCGCGACAACACCATTTAAGGTAAAGGCAAAAACATACAAGACGAGTGACGGGGACGCGTTACGAAGGCCATGGGGACTAAGCCATGTTTTCCGCATTTTTGTTTTTA
GCAGTTATTTTTAAGTGATGTTGTTTTCCCCTTTATTAGCATAGAGAACAATTAAACTGAGGCCAACCCTATTTATGTCGTTTAATTTTTTTGACTTTTGGGATCCCTAA
AAATGGTTTTGATTGTGTTTTTAAATTGAATTTATTTCTATTATATTTTATGGCCTAAAAACGCATGCATGAATAGTAATGTCCCTAGGAAGTGTGTCTTAGGAGTTAAG
GGTGTTATAGTTGGTATCAGAGCCCTAGGTTATGGGTTTTGTAGACTTGCTTACATCGTAAGTACGAGTAGTCCCCTGGCTAAGCAATAAGTTCCAGTCACCATCAGGTA
TGCTTCTAAATTTATGAGTGCAATTAACTATTTCAATATGATCATGTTTTATGTTGTGAGACTGAATTAAATAATTAAATGTGACCTTACCTTATGGTTAGTAGATGACT
AGACTGAATTAGAAATCTTATTTATTGTAGTATTGAAGAAATATGCCACCACTAGAGTTACTACCGGACCAGAAGGAGATCATCCCACCTATGTCGAACCCTCCACATAG
GGGATATTCCTTTAGTAGCTCTAGCGGCGGGACAAACTAATCCAAATGTTATGACCATGATGGTAGAGACGATGCAAGCCTTAGTACGAGCTATAGTAGCCACCCAATTG
GTCCAAACAGGTCATGTTTAGAATGATGCATCAGTAGAGGTCAGATACCTGAAGGATTTCAGAAAGTATGATCCTCGACCGTTTAATGGGTCTTCCAACGACTTCACTGT
GGTTGAGCTGTGGTTGTCCTATATTGAAACCATTTTTCATATTGATGAACTGCCAGGAAGATCAGAGGGTGTCTTGTGCAGCTTTCATGCTGAGAGACGACACTTACTTG
TGGTGGGAGTCCGCTCAGAGGACCAATACAAATGGAGGGCAATCACTTGGAACTTTTTCAGAGAGGCATTCTGGCGCAAGTTTTACTCAACCACGACGCGATATAGAAAG
CAAGTCGAGTTCCTAAATCTCTGTCAGAATAAGAGACCTTTAGAGGTATATGAGATGGAATTCACAAGACTGATGCGTTTTGCTCCAGAACTGGTGGACACCGAGGCTAA
GAAGACAAAACGATTCGTTATGGGTCTAGATGAGGGTATTCGGGGTTTCGTACAGGCACAATCACCCCCATATTATGCTTCAGCAGTGAGAGTAGAAGAGTTGATTGGTG
TTCAGGCCCTGAGTTTACAACAGGTTGTGGTTAACTCAAGTCAGCCCCCTTCGGACCAGAAAAGGAAGTGGGATCAGAAGGGTTCTAACCCCAGCATTATCAGCAATCTT
CGAAACCATCGAGCAATTCACGTTCCACTCCTAGTCAGGGGAACCCGTTTCGATCAGGGAAGGATAGTGGTGAGAAACCACGTTGTGTGGAATGCAGAAGATATCATTGA
GGCAAGTGTTTGTCTCACTCTGGGGAATGCTTTAGATGCAAGAAAGAGGTTCACAAAGCAAAAAATTGTCTCAATCAAAGTGTCAGGGATGAATTATTTAATAACAATAT
GCATTCTCAATCAAAGTGTCAACGCTGTGCCGATTACTCCTATAAATAGAACATGATTTCTTCTTGCAAAGAGGGTCGAATTTGATAGTCTTTGCACCATAATTTCGAAA
TACACTCTGTAAGAAGAGAAAATTGAGCATTCCTTGGGAGTCAAAGCATTCGTGGAGGTTCGAGATCGTGACGGGAGCTCGGGGACAAGGGACCAGCATCGACACATAAG
TTTATTTCCTCTTTCTTTCAGATTGTAACATCGTTCTAAGACGTTTTCTACACTTTTAGTTTGATTTTATTGTGATTTAGAGTGACTAAAAGTTGTGGCAAAATATTATT
TGTAATAATTAAAACAATATATTATAAAAAAA
Protein sequenceShow/hide protein sequence
MEFTRLMRFAPELVDTEAKKTKRFVMGLDEGIRGFVQAQSPPYYASAVRVEELIGVQALSLQQVVVNSSQPPSDQKRKWDQKGSNPSIISNLRNHRAIHVPLLVRGTRFD
QGRIVVRNHVVWNAEDIIEASVCLTLGNALDARKRFTKQKIVSIKVSGMNYLITICILNQSVNAVPITPINRT