; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000180 (gene) of Snake gourd v1 genome

Gene IDTan0000180
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin-regulated family protein
Genome locationLG01:115844096..115847359
RNA-Seq ExpressionTan0000180
SyntenyTan0000180
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608594.1 Snakin-2, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3674.51Show/hide
Query:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK
        +SK+LLTC+ MS L+++LV A E  VNS+ G+A   A IQ+IDCGGACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSG YETCPCYA +TTHGGRRK
Subjt:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK

Query:  CP
        CP
Subjt:  CP

XP_022940222.1 gibberellin-regulated protein 1-like [Cucurbita moschata]2.5e-3674.51Show/hide
Query:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK
        +SK+L+TC+ MS L+++LV A E  VNS+ G+A   A IQ+IDCGGACA RCKLSSRPNLCKRACGTCCARC+CVPPGTSG YETCPCYA +TTHGGRRK
Subjt:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK

Query:  CP
        CP
Subjt:  CP

XP_022982305.1 gibberellin-regulated protein 1-like [Cucurbita maxima]1.5e-3674.51Show/hide
Query:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK
        +SK+L+TC+ MS L+++LVGA E  VNS+ G+A   A +Q+IDCGGACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSG YETCPCYA MTTHGGRRK
Subjt:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK

Query:  CP
        CP
Subjt:  CP

XP_023525231.1 snakin-2-like [Cucurbita pepo subsp. pepo]6.5e-3775.49Show/hide
Query:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK
        +SK+LLTC+ MS L+++LVGA +  VNS+ G+A   A IQ+IDCGGACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSG YETCPCYA MTTHGGRRK
Subjt:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK

Query:  CP
        CP
Subjt:  CP

XP_038899682.1 gibberellin-regulated protein 1-like isoform X1 [Benincasa hispida]2.1e-3573.33Show/hide
Query:  MAISKSLLTC-LFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGG
        M ISK L+   LF+S  L++ +     MVNS+DG+A ++AKIQNIDCGGACA RCKLSSRPNLCKRACGTCCARCSCVPPGTSG Y+ CPCYA MTTHGG
Subjt:  MAISKSLLTC-LFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGG

Query:  RRKCP
        RRKCP
Subjt:  RRKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LDK8 Uncharacterized protein3.7e-3068.57Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDS-AKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGG
        MA+ K ++  L  S L++  V A + MV    G+A  S  K QNIDCGGACA RCKLSSRPNLC RACGTCCARCSCVPPGTSGNYE CPCYA +TTHGG
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDS-AKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGG

Query:  RRKCP
        RRKCP
Subjt:  RRKCP

A0A5D3E7E4 Gibberellin-regulated protein 11-like4.9e-3066.35Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MAI K +   + MS L++  V A +++V    G+A      QNI+CGGACA RCKLSSRPNLCKRACGTCCARCSCVPPGTSGNY  CPCYA++TTHGGR
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
        RKCP
Subjt:  RKCP

A0A6J1CCE1 gibberellin-regulated protein 11-like1.9e-3471.57Show/hide
Query:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK
        +SK L+TC+FMS L++  VGAHE     ++G   D  KIQNIDCGGACA RCKLSSRPNLCKRACGTCCARCSCVPPGTSG Y+ CPCYA +TT GGR K
Subjt:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK

Query:  CP
        CP
Subjt:  CP

A0A6J1FJ01 gibberellin-regulated protein 1-like1.2e-3674.51Show/hide
Query:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK
        +SK+L+TC+ MS L+++LV A E  VNS+ G+A   A IQ+IDCGGACA RCKLSSRPNLCKRACGTCCARC+CVPPGTSG YETCPCYA +TTHGGRRK
Subjt:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK

Query:  CP
        CP
Subjt:  CP

A0A6J1J2A8 gibberellin-regulated protein 1-like7.1e-3774.51Show/hide
Query:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK
        +SK+L+TC+ MS L+++LVGA E  VNS+ G+A   A +Q+IDCGGACA RCKLSSRP+LCKRACGTCCARC+CVPPGTSG YETCPCYA MTTHGGRRK
Subjt:  ISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRK

Query:  CP
        CP
Subjt:  CP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 114.6e-2557.69Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MA+ + LL  L +S L++  V  H  MV S D           IDC   C  RC LSSRPNLC RACGTCCARC+CV PGTSGNY+ CPCY  +TTHGGR
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
        RKCP
Subjt:  RKCP

P46687 Gibberellin-regulated protein 39.5e-2351.92Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MAI +S L  L    L+++ +   E+ V++ +   V    ++ IDCGG C GRC  SSRPNLC RAC +CC RC+CVPPGT+GN+  CPCYA +TT GGR
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
         KCP
Subjt:  RKCP

P46688 Gibberellin-regulated protein 27.3e-2352.88Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MA+ +S L  L    L+I  +  +E+ V++ DG  V    ++ IDCGG C  RC  SSR  LC RAC +CC+RC+CVPPGTSGN   CPCYA +TTHGGR
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
         KCP
Subjt:  RKCP

P46689 Gibberellin-regulated protein 12.4e-2657.69Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MAISK+L+  L +S L++ LV A        +G A      + IDCG AC  RC+LS RP LC RACGTCC RC+CVPPGT GNY+ C CYA +TTHGGR
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
        RKCP
Subjt:  RKCP

Q93X17 Snakin-21.8e-2960.58Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MAISK+L   L +S LL+  V + +    + + I+  +   + IDCGGACA RC+LSSRP LC RACGTCCARC+CVPPGTSGN ETCPCYA +TTHG +
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
        RKCP
Subjt:  RKCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 11.7e-2757.69Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MAISK+L+  L +S L++ LV A        +G A      + IDCG AC  RC+LS RP LC RACGTCC RC+CVPPGT GNY+ C CYA +TTHGGR
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
        RKCP
Subjt:  RKCP

AT1G75750.2 GAST1 protein homolog 11.0e-2758.65Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MAISK+L+  L +S L++ LV A E   NS       +   + IDCG AC  RC+LS RP LC RACGTCC RC+CVPPGT GNY+ C CYA +TTHGGR
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
        RKCP
Subjt:  RKCP

AT2G18420.1 Gibberellin-regulated family protein3.2e-2657.69Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MA+ + LL  L +S L++  V  H  MV S D           IDC   C  RC LSSRPNLC RACGTCCARC+CV PGTSGNY+ CPCY  +TTHGGR
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
        RKCP
Subjt:  RKCP

AT4G09600.1 GAST1 protein homolog 36.8e-2451.92Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MAI +S L  L    L+++ +   E+ V++ +   V    ++ IDCGG C GRC  SSRPNLC RAC +CC RC+CVPPGT+GN+  CPCYA +TT GGR
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
         KCP
Subjt:  RKCP

AT4G09610.1 GAST1 protein homolog 25.2e-2452.88Show/hide
Query:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR
        MA+ +S L  L    L+I  +  +E+ V++ DG  V    ++ IDCGG C  RC  SSR  LC RAC +CC+RC+CVPPGTSGN   CPCYA +TTHGGR
Subjt:  MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGR

Query:  RKCP
         KCP
Subjt:  RKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTTCTAAATCTCTTTTAACCTGTCTTTTCATGTCCTTTCTCCTAATTTATTTGGTTGGAGCTCATGAAATAATGGTAAACTCAATGGATGGTATTGCCGTTGA
CTCTGCTAAGATTCAAAACATTGATTGTGGAGGAGCTTGTGCGGGGAGGTGCAAATTATCTTCAAGACCGAACCTATGCAAGAGGGCATGCGGCACGTGCTGTGCACGTT
GCAGCTGCGTTCCGCCGGGCACTTCGGGCAACTACGAAACCTGCCCTTGCTACGCCCGCATGACCACTCACGGCGGCCGCCGAAAGTGTCCCTAA
mRNA sequenceShow/hide mRNA sequence
CTTGGAGATGGCCATTTCTAAATCTCTTTTAACCTGTCTTTTCATGTCCTTTCTCCTAATTTATTTGGTTGGAGCTCATGAAATAATGGTAAACTCAATGGATGGTATTG
CCGTTGACTCTGCTAAGATTCAAAACATTGATTGTGGAGGAGCTTGTGCGGGGAGGTGCAAATTATCTTCAAGACCGAACCTATGCAAGAGGGCATGCGGCACGTGCTGT
GCACGTTGCAGCTGCGTTCCGCCGGGCACTTCGGGCAACTACGAAACCTGCCCTTGCTACGCCCGCATGACCACTCACGGCGGCCGCCGAAAGTGTCCCTAAATCATCAT
TAAATTCTACCAGCTTGATTAATAATCAATTAAGAGTTTGAAAAAATAAATTAATGTAAAATAAGAATAACTGATATCTGGGAAAACTAGATTCTTCTCTCTCTGTCTCT
TTGTTTGGTGTTGTTGCCCCTGTTTTTGATTCAATTTTCAGCCTTGAAGATTTTGATTCTTCACGTAACTTTGAAAAGAGAAGTTTGCTGCAATCTAGCTAGTAAAATAT
TTCAAATCTGTTACTAAAGGTGCTATTAAAAAGCTGAATATAATTCAACATAATTGACGTACACTTCTTCTTTTGAAGTTGGAGGTTCGAATCTTTCTATACCTTATGTT
CGTTGTACTAAAAAAAACTTATGAAAAAAGAGAAATAATTATGAACAACAAAGTAAGTTCACTTTCTGATTTATATATTGGAAATGAATATGCTTTCAGATGTATGTGGT
CGGCAAATTGTGATTGGGAAAGACAGCGTGCATCGGACCAACCACGTATTCTGGCTATAATTAACTTTTGTACAAAGGAAAAATTCTTAAAGGAAAACAACAAATAAAGA
TAAAGAGTTAATTATGAAATGTTGTAGTAGTGCTTGTCAAACATCCTCCAATAATTGAGTAAAGAAGGTTTTAGATAACTCAACCTTAACAATTTCCCCTCACTGATAGG
CAAAAGATTAACCAAAATTATGAGTTGTGTATGAATGAAGTGGGGATTAGTTGGCTTCAATTTCGAATGTTTCAAGTACAATATATGAGTCATGGGAAGGATGAGTTTTC
GAACATTTAGAAGCGCATTTGAGACTTAATCAAAAGCAGAAATTTGAAAGCAAGGGATTCAATGAAAGCAGAGTTGTATTTCATGTTTTCGGATATGTGTTTAGTAG
Protein sequenceShow/hide protein sequence
MAISKSLLTCLFMSFLLIYLVGAHEIMVNSMDGIAVDSAKIQNIDCGGACAGRCKLSSRPNLCKRACGTCCARCSCVPPGTSGNYETCPCYARMTTHGGRRKCP