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Tan0000182 (gene) of Snake gourd v1 genome

Gene IDTan0000182
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein
Genome locationLG01:113148101..113148376
RNA-Seq ExpressionTan0000182
SyntenyTan0000182
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064422.1 hypothetical protein E6C27_scaffold255G001300 [Cucumis melo var. makuwa]3.7e-1264.38Show/hide
Query:  MVASTHFLTVEGRVMKS----VADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH
        M+ASTHFL VEGRV++S    +A  KEK+E V+P+     M + +SLSSSSR++FRSLSFVLASGPSKKGPGH
Subjt:  MVASTHFLTVEGRVMKS----VADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH

KAG6591405.1 hypothetical protein SDJN03_13751, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2675.79Show/hide
Query:  MAMELSATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSV----ADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH
        MAME+SATAS KRLCF VGVLLMVAS HFLTVEGR ++SV    ADGKEK+  VE IGVAA+  +V+SLSSSS + FRSLSFVLASGPSKKGPGH
Subjt:  MAMELSATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSV----ADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH

KAG6608443.1 hypothetical protein SDJN03_01785, partial [Cucurbita argyrosperma subsp. sororia]4.0e-2270.33Show/hide
Query:  MAMELSATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSVADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH
        MAMEL  TAS +RLCF VGVLLMV  T F++VEGRV+K VAD       VEPIG+ AYMA +DSLS SSR+AF SLSFVL+SGPSKKGPGH
Subjt:  MAMELSATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSVADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH

KGN55240.1 hypothetical protein Csa_012906 [Cucumis sativus]1.0e-1763.16Show/hide
Query:  MAMELSATASAKRLCFFVGVLLMVASTHFLTVEGRVMKS----VADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH
        MAM+L    S K +CF VGVLLM+ASTHFL VEGRV++S    +AD KE++E V+PI     + + +SLSSSSR++FRSLSFVLASGPSKKGPGH
Subjt:  MAMELSATASAKRLCFFVGVLLMVASTHFLTVEGRVMKS----VADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH

XP_019071956.1 PREDICTED: uncharacterized protein LOC109121646 [Vitis vinifera]5.2e-0646.59Show/hide
Query:  SATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSVAD--GKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH
        SAT S K L F + VL++V ST    V  R ++S  D      I+  E +GVA   A V S +SS R++ RSL++ LASGPSK+GPGH
Subjt:  SATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSVAD--GKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH

TrEMBL top hitse value%identityAlignment
A0A0A0KZV6 Uncharacterized protein4.9e-1863.16Show/hide
Query:  MAMELSATASAKRLCFFVGVLLMVASTHFLTVEGRVMKS----VADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH
        MAM+L    S K +CF VGVLLM+ASTHFL VEGRV++S    +AD KE++E V+PI     + + +SLSSSSR++FRSLSFVLASGPSKKGPGH
Subjt:  MAMELSATASAKRLCFFVGVLLMVASTHFLTVEGRVMKS----VADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH

A0A438DYT8 Uncharacterized protein2.5e-0646.59Show/hide
Query:  SATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSVAD--GKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH
        SAT S K L F + VL++V ST    V  R ++S  D      I+  E +GVA   A V S +SS R++ RSL++ LASGPSK+GPGH
Subjt:  SATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSVAD--GKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH

A0A5D3D9C4 Uncharacterized protein1.8e-1264.38Show/hide
Query:  MVASTHFLTVEGRVMKS----VADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH
        M+ASTHFL VEGRV++S    +A  KEK+E V+P+     M + +SLSSSSR++FRSLSFVLASGPSKKGPGH
Subjt:  MVASTHFLTVEGRVMKS----VADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH

A0A5J5WZ42 Uncharacterized protein4.3e-0644.79Show/hide
Query:  MAMELSATASAKRLCFFVGVLLMVASTHF-LTVEGRVMKS---VADGKEKIEAVEPIGVAAYMA-KVDSLSSSSRNAFRSLSFVLASGPSKKGPGH
        + M  +++AS +RL F +GVL ++ ST   + V GR ++S   V  G E  E    +GV ++ A    + SS+SRN+FRSL F LASGPSK+GPGH
Subjt:  MAMELSATASAKRLCFFVGVLLMVASTHF-LTVEGRVMKS---VADGKEKIEAVEPIGVAAYMA-KVDSLSSSSRNAFRSLSFVLASGPSKKGPGH

F6GZW6 Uncharacterized protein2.5e-0646.59Show/hide
Query:  SATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSVAD--GKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH
        SAT S K L F + VL++V ST    V  R ++S  D      I+  E +GVA   A V S +SS R++ RSL++ LASGPSK+GPGH
Subjt:  SATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSVAD--GKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGAATTGAGCGCCACAGCATCAGCAAAACGTCTCTGTTTTTTTGTGGGTGTTCTGTTAATGGTGGCTTCGACGCATTTTCTAACTGTTGAGGGCAGAGTTAT
GAAATCAGTGGCAGATGGGAAGGAGAAAATTGAAGCTGTGGAGCCAATTGGAGTGGCAGCTTATATGGCCAAAGTTGATTCATTAAGTAGCAGTAGTCGCAATGCATTTA
GAAGCTTGAGTTTTGTGTTGGCGTCTGGGCCTAGTAAAAAAGGTCCCGGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGAATTGAGCGCCACAGCATCAGCAAAACGTCTCTGTTTTTTTGTGGGTGTTCTGTTAATGGTGGCTTCGACGCATTTTCTAACTGTTGAGGGCAGAGTTAT
GAAATCAGTGGCAGATGGGAAGGAGAAAATTGAAGCTGTGGAGCCAATTGGAGTGGCAGCTTATATGGCCAAAGTTGATTCATTAAGTAGCAGTAGTCGCAATGCATTTA
GAAGCTTGAGTTTTGTGTTGGCGTCTGGGCCTAGTAAAAAAGGTCCCGGGCATTGA
Protein sequenceShow/hide protein sequence
MAMELSATASAKRLCFFVGVLLMVASTHFLTVEGRVMKSVADGKEKIEAVEPIGVAAYMAKVDSLSSSSRNAFRSLSFVLASGPSKKGPGH