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Tan0000186 (gene) of Snake gourd v1 genome

Gene IDTan0000186
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTPD1 protein homolog 1-like
Genome locationLG01:101136913..101138924
RNA-Seq ExpressionTan0000186
SyntenyTan0000186
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60075.1 hypothetical protein Csa_001952 [Cucumis sativus]3.1e-2547.97Show/hide
Query:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP
        M       Y+  F  LL+KG+ +CSM ++ ISQ+ T   VNGK EW+ TI N+C  C+Q++V+  C GF+TVE +  + L   GS C+VN G PI+++ P
Subjt:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP

Query:  ITFTYAWDPSFDFRPFFSQVACA
        I+FTYAWD +F F P FSQVAC+
Subjt:  ITFTYAWDPSFDFRPFFSQVACA

XP_022141668.1 TPD1 protein homolog 1-like [Momordica charantia]8.8e-4471.43Show/hide
Query:  SPLMAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYS
        S LMAVIFK I VFIF+SLLAKG   CSM +L I QTPT  MVNGK EW+V I+NEC+NCTQ NVR KCGGF T +AIK T LAK+G+QCVVN G PIYS
Subjt:  SPLMAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYS

Query:  AVPITFTYAWDPSFDFRPFFSQVACA
        ++PITFTYAWDP F+F PFFSQV C+
Subjt:  AVPITFTYAWDPSFDFRPFFSQVACA

XP_022141896.1 uncharacterized protein At1g05835-like [Momordica charantia]5.4e-2546.34Show/hide
Query:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP
        M    K++    F  LL+KG+ QCS+G+++I Q  TE  V G+ EW VT++N C  C+Q+NV+L C GFS+ E +  + L   G++C++NGG PI+ + P
Subjt:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP

Query:  ITFTYAWDPSFDFRPFFSQVACA
        I+FTYAWD  F F+P  SQVAC+
Subjt:  ITFTYAWDPSFDFRPFFSQVACA

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]5.4e-2545.53Show/hide
Query:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP
        MA+  K++   + +SL++ G+ QC + N+TISQ  T   ++G TEWKVTI+N C  C+Q  V++ C GF T E+I P+ LA   ++C+VN G PI+++ P
Subjt:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP

Query:  ITFTYAWDPSFDFRPFFSQVACA
        ITF+YA DP F+F+P  SQ++C+
Subjt:  ITFTYAWDPSFDFRPFFSQVACA

XP_038896903.1 TPD1 protein homolog 1-like [Benincasa hispida]9.8e-2749.59Show/hide
Query:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP
        M    K + V  F  LL+KG  QCSM ++TISQ+ T   VNGK EW+ TITN C  C+Q++V+  C GF++VE +  + L   GS+C+VN G P++ + P
Subjt:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP

Query:  ITFTYAWDPSFDFRPFFSQVACA
        I+FTYAWD +F F+P FSQVAC+
Subjt:  ITFTYAWDPSFDFRPFFSQVACA

TrEMBL top hitse value%identityAlignment
A0A0A0LDN0 Uncharacterized protein1.5e-2547.97Show/hide
Query:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP
        M       Y+  F  LL+KG+ +CSM ++ ISQ+ T   VNGK EW+ TI N+C  C+Q++V+  C GF+TVE +  + L   GS C+VN G PI+++ P
Subjt:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP

Query:  ITFTYAWDPSFDFRPFFSQVACA
        I+FTYAWD +F F P FSQVAC+
Subjt:  ITFTYAWDPSFDFRPFFSQVACA

A0A0A0LEA1 Uncharacterized protein2.9e-2447.15Show/hide
Query:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP
        M    K + V  F  LL+KG+ +C + ++ ISQT T ++V GK  WK TITN C  C Q +++L C GF+TV+A+ P+ LA  GS C+VNGG PI+ + P
Subjt:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP

Query:  ITFTYAWDPSFDFRPFFSQVACA
        I+FTYA D +F F+P  SQ++C+
Subjt:  ITFTYAWDPSFDFRPFFSQVACA

A0A2G9I3S0 Uncharacterized protein1.9e-2347.2Show/hide
Query:  MAVIFKIIYVFIFISLLAKGSL--QCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSA
        MA I  I+ V +F+SL+++GSL  QC + +L I+Q PT   VN K EW  TI+N C  CTQ NV+L C GF T E + P+ L+K G  C++N G PIY  
Subjt:  MAVIFKIIYVFIFISLLAKGSL--QCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSA

Query:  VPITFTYAWDPSFDFRPFFSQVACA
          I+F YAWD  F F+  +S++AC+
Subjt:  VPITFTYAWDPSFDFRPFFSQVACA

A0A6J1CKK7 uncharacterized protein At1g05835-like2.6e-2546.34Show/hide
Query:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP
        M    K++    F  LL+KG+ QCS+G+++I Q  TE  V G+ EW VT++N C  C+Q+NV+L C GFS+ E +  + L   G++C++NGG PI+ + P
Subjt:  MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVP

Query:  ITFTYAWDPSFDFRPFFSQVACA
        I+FTYAWD  F F+P  SQVAC+
Subjt:  ITFTYAWDPSFDFRPFFSQVACA

A0A6J1CL63 TPD1 protein homolog 1-like4.3e-4471.43Show/hide
Query:  SPLMAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYS
        S LMAVIFK I VFIF+SLLAKG   CSM +L I QTPT  MVNGK EW+V I+NEC+NCTQ NVR KCGGF T +AIK T LAK+G+QCVVN G PIYS
Subjt:  SPLMAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYS

Query:  AVPITFTYAWDPSFDFRPFFSQVACA
        ++PITFTYAWDP F+F PFFSQV C+
Subjt:  AVPITFTYAWDPSFDFRPFFSQVACA

SwissProt top hitse value%identityAlignment
Q6TLJ2 Protein TAPETUM DETERMINANT 16.8e-0730.1Show/hide
Query:  QCSMGNLTISQTPTEAMVNGKTEWKVTITNECQN-CTQFNVRLKCGGFSTVEAIKPTTLAKLG-SQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV
        +C   ++ ++Q  TE M NG   + V ITN+C + C    + + CG FS+ + I P    ++    C+VN G P+     ++F YA   +F +    + V
Subjt:  QCSMGNLTISQTPTEAMVNGKTEWKVTITNECQN-CTQFNVRLKCGGFSTVEAIKPTTLAKLG-SQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV

Query:  ACA
         CA
Subjt:  ACA

Arabidopsis top hitse value%identityAlignment
AT4G24972.1 tapetum determinant 14.9e-0830.1Show/hide
Query:  QCSMGNLTISQTPTEAMVNGKTEWKVTITNECQN-CTQFNVRLKCGGFSTVEAIKPTTLAKLG-SQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV
        +C   ++ ++Q  TE M NG   + V ITN+C + C    + + CG FS+ + I P    ++    C+VN G P+     ++F YA   +F +    + V
Subjt:  QCSMGNLTISQTPTEAMVNGKTEWKVTITNECQN-CTQFNVRLKCGGFSTVEAIKPTTLAKLG-SQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV

Query:  ACA
         CA
Subjt:  ACA

AT4G32100.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein2.6e-0930.77Show/hide
Query:  IIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYA
        ++ +F F++    G    S+ +L++ Q+ T  MV  K EW+V + N    C   +  L C  F +V  I    L+K G  C++  G  I+    I+F Y 
Subjt:  IIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYA

Query:  WDPSFDFRPFFSQVACA
        WD SFD +     +AC+
Subjt:  WDPSFDFRPFFSQVACA

AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein4.4e-1732.48Show/hide
Query:  KIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTY
        K++ + +F++ + +G   C +  L++ Q+ T  +V  K EW+V +TN C NC     +L C GF +V  +  + L+K G  C++N G  I+  V   F Y
Subjt:  KIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTY

Query:  AWDPSFDFRPFFSQVAC
         WD SFD +     + C
Subjt:  AWDPSFDFRPFFSQVAC

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein1.4e-1836.75Show/hide
Query:  KIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTY
        K++ + +F++ + +G   CS+ +L++ Q+ T  +V  K EW+V +TN C NC   N  L C GF++V  I  + L K G  C+VN G  I   V I F Y
Subjt:  KIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTY

Query:  AWDPSFDFRPFFSQVAC
         WD SFD +     + C
Subjt:  AWDPSFDFRPFFSQVAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCCGTTGATGGCTGTCATCTTCAAGATTATTTATGTATTCATCTTCATCTCTCTCCTTGCCAAAGGGAGTTTGCAATGCTCAATGGGTAACTTAACAATCAGCCA
AACTCCAACCGAGGCAATGGTAAATGGCAAAACAGAATGGAAAGTTACTATCACCAATGAATGCCAAAATTGCACTCAGTTCAATGTGAGATTGAAGTGTGGAGGTTTCA
GCACAGTTGAAGCCATTAAACCCACCACCTTAGCCAAGTTGGGGTCTCAATGTGTGGTCAATGGTGGCTTTCCAATCTATTCTGCTGTTCCCATCACCTTCACTTATGCA
TGGGACCCTTCATTTGATTTCAGGCCTTTCTTCTCCCAAGTTGCTTGTGCCTAG
mRNA sequenceShow/hide mRNA sequence
GATATTCTAACTGCTCCTCAGAAAATAAAATTTGTTTCTGGGAAGGAAAAAAAAAATGTCCCCGTTGATGGCTGTCATCTTCAAGATTATTTATGTATTCATCTTCATCT
CTCTCCTTGCCAAAGGGAGTTTGCAATGCTCAATGGGTAACTTAACAATCAGCCAAACTCCAACCGAGGCAATGGTAAATGGCAAAACAGAATGGAAAGTTACTATCACC
AATGAATGCCAAAATTGCACTCAGTTCAATGTGAGATTGAAGTGTGGAGGTTTCAGCACAGTTGAAGCCATTAAACCCACCACCTTAGCCAAGTTGGGGTCTCAATGTGT
GGTCAATGGTGGCTTTCCAATCTATTCTGCTGTTCCCATCACCTTCACTTATGCATGGGACCCTTCATTTGATTTCAGGCCTTTCTTCTCCCAAGTTGCTTGTGCCTAGT
TACACAAGGTGTTTGCTTTCTCTTTTCTCCAATGTAGGAGTCCTCCTTCACTCCTTTTATGTTCTGTACTACAAGTCTTTTATACAGTTTTAAGTCTTATTTTGGCCCCT
TCAAACTTCCATATATATTTATATTGCTACGAACAAAAGTTGGTTGAAGTCAGTTAATG
Protein sequenceShow/hide protein sequence
MSPLMAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYA
WDPSFDFRPFFSQVACA