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Tan0000196 (gene) of Snake gourd v1 genome

Gene IDTan0000196
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:3586766..3587667
RNA-Seq ExpressionTan0000196
SyntenyTan0000196
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2477.5Show/hide
Query:  MASKRVSVIWRVVFFIVMLLMTSNVSARKFLDTNIPVEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
        MAS  VSV WR VFFI MLLM SNVS+RK LD NIPVEDG NV+IGASS F  LEGELEKRFE F+KSHT ND PRGGNY
Subjt:  MASKRVSVIWRVVFFIVMLLMTSNVSARKFLDTNIPVEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]1.4e-1864.29Show/hide
Query:  MASKRVSVIWRVVFFIVMLLMTS----NVSARKFLDTNIPVEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
        MASKRVS+I  VVFFI+MLL++S    NVSARKFLD N P++D  N+Q+ ASSLF  ++GEL++RFED LK+ T ND PRGGNY
Subjt:  MASKRVSVIWRVVFFIVMLLMTS----NVSARKFLDTNIPVEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]2.9e-1662.35Show/hide
Query:  MASKRVSVIWRVVFFIVMLLMTS----NVSARKFLDTNIP-VEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
        MAS RVS+I  V+FFI+ML ++S    N SARKFLD N P ++D  ++Q+GASSLF  LEGEL+KRFED LK+ T ND PRGGNY
Subjt:  MASKRVSVIWRVVFFIVMLLMTS----NVSARKFLDTNIP-VEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
XP_031739611.1 uncharacterized protein LOC116403190 isoform X2 [Cucumis sativus]1.5e-0960.38Show/hide
Query:  RKFLDTNIPVEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
        +KFLD N P++D  N+Q+ ASSLF  ++GEL++RFED LK+ T ND PRGGNY
Subjt:  RKFLDTNIPVEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein1.4e-1662.35Show/hide
Query:  MASKRVSVIWRVVFFIVMLLMTS----NVSARKFLDTNIP-VEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
        MAS RVS+I  V+FFI+ML ++S    N SARKFLD N P ++D  ++Q+GASSLF  LEGEL+KRFED LK+ T ND PRGGNY
Subjt:  MASKRVSVIWRVVFFIVMLLMTS----NVSARKFLDTNIP-VEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
A0A0A0KW84 Uncharacterized protein6.7e-1964.29Show/hide
Query:  MASKRVSVIWRVVFFIVMLLMTS----NVSARKFLDTNIPVEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
        MASKRVS+I  VVFFI+MLL++S    NVSARKFLD N P++D  N+Q+ ASSLF  ++GEL++RFED LK+ T ND PRGGNY
Subjt:  MASKRVSVIWRVVFFIVMLLMTS----NVSARKFLDTNIPVEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGAGAGTTTCAGTGATTTGGAGAGTGGTATTTTTCATTGTCATGCTTTTAATGACCTCTAATGTTTCTGCCAGGAAATTTCTTGATACTAATATCCCTGT
TGAGGATGGCTTGAACGTTCAAATTGGTGCATCTTCATTATTCGACAACTTGGAGGGGGAACTGGAAAAGAGATTTGAGGATTTCTTAAAATCACATACTAGCAATGATG
ATCCTCGAGGTGGAAACTATTAA
mRNA sequenceShow/hide mRNA sequence
AAATTACTCAAACCTTTGGTTGCTTTAATTTCTTTGACTGTTTGTTTATATATAAATACATAAGCTACTAAATTAACACATACCTCAAAAACGCAAAGAGTAATTAATCA
TCTTTCTTACATATCCTTAAGCTTTCTCTCTCTCGTTCTAAAATGGCTTCCAAGAGAGTTTCAGTGATTTGGAGAGTGGTATTTTTCATTGTCATGCTTTTAATGACCTC
TAATGTTTCTGCCAGGAAATTTCTTGATACTAATATCCCTGTTGAGGATGGCTTGAACGTTCAAATTGGTGCATCTTCATTATTCGACAACTTGGAGGGGGAACTGGAAA
AGAGATTTGAGGATTTCTTAAAATCACATACTAGCAATGATGATCCTCGAGGTGGAAACTATTAAATGGAAACATAAAAGTATATGGCAATTCAGTAGAAGTAAATTAGT
TGGATGTGAACTATACGTGTTCTAGTTAAATTTTAATGTGTAATTGAAGCAGAATAATGAGCTTTATTATTTTTATTTTTTCTTCTTATAATTGATCTTATTTTCAGTAA
GAATCTTTAAATACGTGAAAAAGAAATTCAAGGAACCATTCTCGATCAACGGACGGGCAATAACATAACATAATTAATATATAC
Protein sequenceShow/hide protein sequence
MASKRVSVIWRVVFFIVMLLMTSNVSARKFLDTNIPVEDGLNVQIGASSLFDNLEGELEKRFEDFLKSHTSNDDPRGGNY