; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000212 (gene) of Snake gourd v1 genome

Gene IDTan0000212
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationLG04:3173454..3174677
RNA-Seq ExpressionTan0000212
SyntenyTan0000212
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY61101.1 hypothetical protein CUMW_207140, partial [Citrus unshiu]1.1e-3627.04Show/hide
Query:  MVSPEL-AQSTVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQ
        ++ P L +++ V  L+  +  WD + I R F + D   I +IP       DE++W +   G +TVKS Y+  L  R    A  S+SE  +N W  +WS+ 
Subjt:  MVSPEL-AQSTVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQ

Query:  IPNRIKICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANK----GKLDV
        +P +I+I  W+  ++ LP+ +NL +R +  +P C +CK   ++  H    CK  +K WRL L       + N     P       + G  +      +D+
Subjt:  IPNRIKICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANK----GKLDV

Query:  FMIILWKIWGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASH
        F  +LW  W  RN  +      N   +    +  +  + +V  S +K+  LG      W PP  G+  + TDA+ N      G+G ++R+  G+V   + 
Subjt:  FMIILWKIWGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASH

Query:  QFIRDQGSILILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRA
        +  +  GS+   E   +  G++   +  +  +++ESDS E + L+  +    +E   +   I +L+E + H++  + HRS N  AH+LA+ A
Subjt:  QFIRDQGSILILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRA

XP_023905045.1 uncharacterized protein LOC112016795 [Quercus suber]3.0e-3728.04Show/hide
Query:  STVRILLKE-DGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGL---QQRIAQEASSSNSEGVRNFWKSLWSVQIPNRI
        +TV  L+ E  GEW++D ++  F  DD   IL IPR    N D ++W Y P+G FTV SAY++ L   Q +  +E S ++S     FW+ +WS++IPN++
Subjt:  STVRILLKE-DGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGL---QQRIAQEASSSNSEGVRNFWKSLWSVQIPNRI

Query:  KICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLF-LPSNGDIFYVNRYSWGPADYFGWTMGGANKGK--LDVFMIILW
        K  +W+  ++ LPTK NL  RG+  DP C  C    +++ HLFW C+   + W    +P +    +   +     D   + +   + G+  L++ + I W
Subjt:  KICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLF-LPSNGDIFYVNRYSWGPADYFGWTMGGANKGK--LDVFMIILW

Query:  KIWGFRNDIVNSHG----GTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQF
         +W  RN +   HG     +N       T M   +    +  Q         + + W+PP+  W+ + TDA+    + + GIG ++R+  G VI A  Q 
Subjt:  KIWGFRNDIVNSHG----GTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQF

Query:  IRDQGSILILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATRLHSDDFGF
        +      L  E   +   +    +  +  +++E+DS      + G  +       + + I Q    + H+  +H+ R  NK AH LAQ A  +H      
Subjt:  IRDQGSILILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATRLHSDDFGF

Query:  EES
        EE+
Subjt:  EES

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]5.7e-3627.42Show/hide
Query:  STVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICS
        S V  L+K D +WD  K+R+ F + D   ILKIP       DE++W Y+ RG ++VKS Y+L L+ +     S+S +E    +W +LW++++P ++KI  
Subjt:  STVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICS

Query:  WKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGA---NKGKLDVFMIILWKIWG
        W+   + LP+ +NL +R +  +P C  CK   ++  H    CK  RK W L  P     F   R      D F      A    K  L++ + + W  W 
Subjt:  WKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGA---NKGKLDVFMIILWKIWG

Query:  FRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLG-QVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQGSI
         RN  +      N    +   +  ++ F +V   Q+   S+  +    +W+PP +  + +  DA+ N    + G+G ++R+  G+++ A       +GS 
Subjt:  FRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLG-QVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQGSI

Query:  LILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRA
         + E   ++ G++   N ++  L++ESD LE + L+       +E       I    + +  +   HI R  N  AH LA+ A
Subjt:  LILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRA

XP_024956542.1 uncharacterized protein LOC112498908 [Citrus sinensis]9.7e-3626.34Show/hide
Query:  AQSTVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKI
        +++ V  L+  +  WD + I + F + D   I +IP       DE++W +   G +TVKS Y+  L+ R    A  S+SE  +N W  +WS+ +P +I+I
Subjt:  AQSTVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKI

Query:  CSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMG---GANKGKLDVFMIILWKI
          W+  ++ LP+ +NL +R +  +P C +CK   ++  H    CK  +K WRL       +FY++  +    D      G     +   +D+F ++LW  
Subjt:  CSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMG---GANKGKLDVFMIILWKI

Query:  WGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTS-------QEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQ
        W  RN  +      N   +    +  +  + +V  S       Q+K+  LG      W PP  G+  + TDA+ N      G+G ++R+  G+V   + +
Subjt:  WGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTS-------QEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQ

Query:  FIRDQGSILILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRA
          +  GS+   E   +  G++   +  +  +++ESDS E + L+  +    +E   +   I +L+E + H++  + HRS N  AH+L + A
Subjt:  FIRDQGSILILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRA

XP_030495196.1 uncharacterized protein LOC115710989 [Cannabis sativa]2.2e-3526.55Show/hide
Query:  STVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICS
        + V  L+ ED +WD+  + + F   DV   L IP     +ND +VW +   GI+TV+S Y L     +A++  SS+S     +WKS WS+Q+P +IKI +
Subjt:  STVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICS

Query:  WKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANKGKLDVFMIILWKIWGFRN
        W++I   LP   +L++R +  D  C +C++  +S  H+F+GC   +  WRL   S     +    S    DY  +      K + +  +  LW IW  RN
Subjt:  WKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANKGKLDVFMIILWKIWGFRN

Query:  DIVNSHGGTNWFKLSTLTQMAISEFTQVS------TSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQG
         +V+S    +   L+  +   +  +           +  ++ S     ++ W PP  G   L  DA+ +      G+G ++RN  G+VI A    I    
Subjt:  DIVNSHGGTNWFKLSTLTQMAISEFTQVS------TSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQG

Query:  SILILELMGIVKGMRSITNREIPL-MVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATRL
        +   +E   +  G+  +  +++ + +VE+D+L     ++          DL   I  L   + +    H+ R+ N  A +LA+ A  L
Subjt:  SILILELMGIVKGMRSITNREIPL-MVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATRL

TrEMBL top hitse value%identityAlignment
A0A2H5Q972 Uncharacterized protein (Fragment)5.6e-3727.04Show/hide
Query:  MVSPEL-AQSTVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQ
        ++ P L +++ V  L+  +  WD + I R F + D   I +IP       DE++W +   G +TVKS Y+  L  R    A  S+SE  +N W  +WS+ 
Subjt:  MVSPEL-AQSTVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQ

Query:  IPNRIKICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANK----GKLDV
        +P +I+I  W+  ++ LP+ +NL +R +  +P C +CK   ++  H    CK  +K WRL L       + N     P       + G  +      +D+
Subjt:  IPNRIKICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANK----GKLDV

Query:  FMIILWKIWGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASH
        F  +LW  W  RN  +      N   +    +  +  + +V  S +K+  LG      W PP  G+  + TDA+ N      G+G ++R+  G+V   + 
Subjt:  FMIILWKIWGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASH

Query:  QFIRDQGSILILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRA
        +  +  GS+   E   +  G++   +  +  +++ESDS E + L+  +    +E   +   I +L+E + H++  + HRS N  AH+LA+ A
Subjt:  QFIRDQGSILILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRA

A0A803P623 Uncharacterized protein1.0e-3526.55Show/hide
Query:  STVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICS
        + V  L+ ED +WD+  + + F   DV   L IP     +ND +VW +   GI+TV+S Y L     +A++  SS+S     +WKS WS+Q+P +IKI +
Subjt:  STVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICS

Query:  WKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANKGKLDVFMIILWKIWGFRN
        W++I   LP   +L++R +  D  C +C++  +S  H+F+GC   +  WRL   S     +    S    DY  +      K + +  +  LW IW  RN
Subjt:  WKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANKGKLDVFMIILWKIWGFRN

Query:  DIVNSHGGTNWFKLSTLTQMAISEFTQVS------TSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQG
         +V+S    +   L+  +   +  +           +  ++ S     ++ W PP  G   L  DA+ +      G+G ++RN  G+VI A    I    
Subjt:  DIVNSHGGTNWFKLSTLTQMAISEFTQVS------TSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQG

Query:  SILILELMGIVKGMRSITNREIPL-MVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATRL
        +   +E   +  G+  +  +++ + +VE+D+L     ++          DL   I  L   + +    H+ R+ N  A +LA+ A  L
Subjt:  SILILELMGIVKGMRSITNREIPL-MVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATRL

A0A803PV88 Uncharacterized protein1.8e-3529.29Show/hide
Query:  TVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICSW
        TV   +   G W+ DK+   F    V +IL++P   +H +D +VWK++P G+FTVKSAY L      +   SSSN     ++WK+ W++ +P ++K  SW
Subjt:  TVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICSW

Query:  KIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYV-NRYSWGPADYFGWTMGG---ANKGKLDVFMIILWKIWG
        ++    LP   NL RR     P C  CK   ++  H    C    K W+    S    FY+ NRY     D   + + G    NK  L + + I+W IW 
Subjt:  KIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYV-NRYSWGPADYFGWTMGG---ANKGKLDVFMIILWKIWG

Query:  FRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSD---WIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQG
         RN  + ++       +   T   IS++ +  ++  + +S   +  +D    +P N   + L TDA+ +      GIG +V++ +G V+  ++  I   G
Subjt:  FRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSD---WIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQG

Query:  SI--LILELMGIVKGMRSITNREIPL-MVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWS---HITFRHIHRSTNKEAHNLAQRATRLHSD
        ++   + E + +  G+    + +IPL +VE+DS    LL++  L    +   L DI+  +R   S   ++  RH  R  N +AHNLA+RA  L  +
Subjt:  SI--LILELMGIVKGMRSITNREIPL-MVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWS---HITFRHIHRSTNKEAHNLAQRATRLHSD

A0A803QEG9 Uncharacterized protein5.6e-3725.82Show/hide
Query:  LLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICSWKIIQ
        L+ ++ +W+I  +++ F   D+  IL +P       D+++W ++  G FTV+SAY L     +  E  SS+S     +WK  WS+QIP ++KI +W++I 
Subjt:  LLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICSWKIIQ

Query:  SCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANKGKLDVFMIILWKIWGFRNDIVNS
          LP   +L+RR +  D  C +CK+  +ST H  +GCK  +  WR F   + +  +    S    DY  +     NK +++    I+W IWG RN +V+ 
Subjt:  SCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANKGKLDVFMIILWKIWGFRNDIVNS

Query:  HGGTNWFKLSTLTQMAISEF----------------TQVS--TSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASH
                L+    + +  F                T V+  + Q           S W PP    + L TDA+  ++    G+G ++R+  G V  A  
Subjt:  HGGTNWFKLSTLTQMAISEF----------------TQVS--TSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASH

Query:  QFIRDQGSILILELMGIVKGMRSITNREIPLM-VESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATRL
          I        +E   +   +     +++P+  +E+D+L  +  ++      +E  DL   +  L   + +++  H++R+ N  AH LA+ A  L
Subjt:  QFIRDQGSILILELMGIVKGMRSITNREIPLM-VESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATRL

A0A803QPB7 Uncharacterized protein6.1e-3628.46Show/hide
Query:  AQSTVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKI
        A+ T+  LL+ DG W  +++R  F  DD+  +L I +  I+ +D I W  +P GI++V S Y+L  Q      A  SN   ++++WK +W   +  +IK 
Subjt:  AQSTVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKI

Query:  CSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANKGKLDVFMIILWKIWGF
          W++    +PTK  L +RG+ ID  C +C    +  CH  W C   +  W+LF    G    +       AD   W      K +   FM + W +W  
Subjt:  CSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANKGKLDVFMIILWKIWGF

Query:  RNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQGSILI
        RN+ V  H   +  K+ T   M +  FT +   Q+  ++    + S WIPP + ++ + TDAS     +  G+  ++R+ +G ++ A+  FI    S+L+
Subjt:  RNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQGSILI

Query:  LELMGIVKGMR-----SITNREIPLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQ
         E   +  G++     SITN +    V SD+   I  +       T+   L   I  LR ++  + F    RS N+ A++LA+
Subjt:  LELMGIVKGMR-----SITNREIPLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.2e-2225.83Show/hide
Query:  QSTVRILLKEDGE---WDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRI
        + T+  L +  G    WD  KI +   + D G I +I   +    D+I+W YN  G +TV+S Y L          + +   G  +    +W++ I  ++
Subjt:  QSTVRILLKEDGE---WDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRI

Query:  KICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPS-NGDIFYVNRYSWGPADYFGW----TMGGANKGKLDVFMII
        K   W+ +   L T + L  RG+ IDP CP C +  +S  H  + C      WRL   S   +    N +    ++   +    TM   +K  L V++I 
Subjt:  KICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPS-NGDIFYVNRYSWGPADYFGW----TMGGANKGKLDVFMII

Query:  LWKIWGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITS---DWIPPNRGWWSLCTDASRN-DAMEAGGIGWIVRNCEGEVICASH
         W+IW  RN++V +    +  K     +    ++   + S +K  S  + I     +W  P   +     DA  +   +EA G GWI+RN  G  I    
Subjt:  LWKIWGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITS---DWIPPNRGWWSLCTDASRN-DAMEAGGIGWIVRNCEGEVICASH

Query:  QFIRDQGSILILELMGIVKGMRSITNR-EIPLMVESDSLEAILLIEGKLVIYTEARDLRDI-IWQLREEWSHITFRHIHRSTNKEAHNLAQ
          +    + L  E   ++  ++    R    + +E D    I LI G     + A  L DI  W    +++ I F  I R  NK AH LA+
Subjt:  QFIRDQGSILILELMGIVKGMRSITNR-EIPLMVESDSLEAILLIEGKLVIYTEARDLRDI-IWQLREEWSHITFRHIHRSTNKEAHNLAQ

AT3G25270.1 Ribonuclease H-like superfamily protein4.7e-1220.72Show/hide
Query:  LWSVQIPNRIKICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPAD-YFGWTMGGANKGKL
        +W ++   +IK   WK++   L T DNL RR +   P C  C +  +++ HLF+ C   ++ WR     + ++           +      +        
Subjt:  LWSVQIPNRIKICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPAD-YFGWTMGGANKGKL

Query:  DVFMIILWKIWGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSD-----------WIPPNRGWWSLCTDASRNDAMEAGGIGWI
        ++ + ILW++W  RN +V      +W       Q A ++  +   +   +QSL Q + S            W  P   W     D + N        GW+
Subjt:  DVFMIILWKIWGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSD-----------WIPPNRGWWSLCTDASRNDAMEAGGIGWI

Query:  VRNCEGEVICASHQFIRDQGSILILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRD-IIWQLREEWSHITFRHIHRSTNKEAH
        +R+  G  + +           L  E   ++  M+   ++    ++ E DS +   L+  + + +     +R+   WQ R E     F+ + R+ N+ A 
Subjt:  VRNCEGEVICASHQFIRDQGSILILELMGIVKGMRSITNREI-PLMVESDSLEAILLIEGKLVIYTEARDLRD-IIWQLREEWSHITFRHIHRSTNKEAH

Query:  NLAQ
         LA+
Subjt:  NLAQ

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.9e-0628.79Show/hide
Query:  NFWKSLWSVQIPNRIKICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRK
        N+   +WS++I  +IK+  WK + + LP    L+ R + I+P+C  C+ +   T H+ + C   ++
Subjt:  NFWKSLWSVQIPNRIKICSWKIIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRK

AT4G29090.1 Ribonuclease H-like superfamily protein3.2e-2124.62Show/hide
Query:  LLKEDG-EWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSS--NSEGVRNFWKSLWSVQIPNRIKICSWK
        L+ E G EW  D I   F E +   I ++        D   W Y   G +TVKS Y + L Q I + +S    +   +   ++ +W  Q   +I+   WK
Subjt:  LLKEDG-EWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSS--NSEGVRNFWKSLWSVQIPNRIKICSWK

Query:  IIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLF---LPSNG---DIFYVNRYSWGPADYFGWTMGGAN---KGKLDVFMIILW
         + + LP    L  R L  +  C  C    ++  HL + C   R  W +    +P  G   D  YVN        Y+ + +G  N   +    +   +LW
Subjt:  IIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLF---LPSNG---DIFYVNRYSWGPADYFGWTMGGAN---KGKLDVFMIILW

Query:  KIWGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSD---WIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFI
        ++W  RN++V      N  ++    +  + E+ ++ T  E   +  QV  S    W PP   W    TDA+ N   E  GIGW++RN +GEV     + +
Subjt:  KIWGFRNDIVNSHGGTNWFKLSTLTQMAISEFTQVSTSQEKLQSLGQVITSD---WIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFI

Query:  RDQGSILILELMGIVKGMRSITNREIPLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATR
            S+L  EL  +   + S++  +   ++     + ++ I     I+   +     + +L  +++ + F  I R    E + LA+R  R
Subjt:  RDQGSILILELMGIVKGMRSITNREIPLMVESDSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATR

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-0730.19Show/hide
Query:  ILWKIWGFRNDIVNSHGGTNWFKLSTLTQMAISEF------TQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVI-
        ++W+IW   ND+V +H  T   K  T  +MA+++       T  +  Q   ++      + W PP R       DAS ++     G+GWI+RN +G VI 
Subjt:  ILWKIWGFRNDIVNSHGGTNWFKLSTLTQMAISEF------TQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVI-

Query:  CASHQF
        C   +F
Subjt:  CASHQF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTCCTGAACTGGCTCAAAGTACGGTTCGTATTCTGTTAAAAGAAGACGGGGAGTGGGACATTGATAAGATTCGAAGGTGTTTCCAGGAAGATGATGTTGGTAA
TATCCTCAAAATCCCACGTTACGAGATACATAATAACGACGAAATTGTTTGGAAGTATAATCCACGTGGTATCTTTACTGTCAAGAGTGCTTATCGCCTCGGCCTCCAAC
AAAGAATAGCTCAGGAAGCCTCAAGTTCTAACAGTGAGGGTGTTAGGAACTTCTGGAAGTCATTATGGAGTGTTCAGATCCCCAACAGAATTAAAATTTGTTCATGGAAA
ATCATTCAGAGTTGTTTACCAACGAAAGACAACTTAATCCGTCGGGGTTTGGAAATCGACCCATGGTGTCCGATGTGCAAGAAGTACCCAAAATCAACTTGTCATCTTTT
TTGGGGATGTAAAGTAACTCGAAAGTTTTGGCGTCTTTTCCTCCCTTCTAACGGAGATATTTTTTATGTCAACAGATACTCCTGGGGCCCGGCCGACTACTTTGGATGGA
CTATGGGTGGTGCAAACAAAGGGAAGCTCGATGTTTTTATGATTATACTCTGGAAAATATGGGGCTTTCGGAACGACATTGTGAATAGTCATGGAGGAACGAACTGGTTT
AAGTTGAGTACACTTACTCAAATGGCAATTAGTGAATTTACCCAGGTCTCCACTAGCCAGGAGAAATTGCAGAGTCTAGGCCAAGTCATTACTTCTGATTGGATTCCCCC
AAACAGGGGTTGGTGGAGCCTCTGTACAGATGCCTCTAGGAATGATGCAATGGAAGCGGGCGGTATTGGCTGGATAGTTCGAAATTGTGAGGGTGAGGTGATCTGTGCGA
GTCATCAATTCATCAGAGATCAAGGGTCTATTCTAATTTTGGAGCTGATGGGAATCGTAAAGGGAATGAGATCTATCACGAATAGAGAAATTCCTCTAATGGTGGAATCA
GACTCTCTAGAGGCAATATTACTAATTGAAGGTAAGCTTGTGATTTACACAGAGGCAAGGGACTTAAGAGACATCATCTGGCAGCTGCGAGAGGAATGGTCACATATTAC
TTTCAGACATATTCACCGATCGACGAATAAGGAAGCGCACAATTTAGCTCAAAGGGCAACACGTTTGCATTCTGATGACTTTGGGTTTGAGGAGTCAACCAGGCTCCGAA
GCTTTATTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTCCTGAACTGGCTCAAAGTACGGTTCGTATTCTGTTAAAAGAAGACGGGGAGTGGGACATTGATAAGATTCGAAGGTGTTTCCAGGAAGATGATGTTGGTAA
TATCCTCAAAATCCCACGTTACGAGATACATAATAACGACGAAATTGTTTGGAAGTATAATCCACGTGGTATCTTTACTGTCAAGAGTGCTTATCGCCTCGGCCTCCAAC
AAAGAATAGCTCAGGAAGCCTCAAGTTCTAACAGTGAGGGTGTTAGGAACTTCTGGAAGTCATTATGGAGTGTTCAGATCCCCAACAGAATTAAAATTTGTTCATGGAAA
ATCATTCAGAGTTGTTTACCAACGAAAGACAACTTAATCCGTCGGGGTTTGGAAATCGACCCATGGTGTCCGATGTGCAAGAAGTACCCAAAATCAACTTGTCATCTTTT
TTGGGGATGTAAAGTAACTCGAAAGTTTTGGCGTCTTTTCCTCCCTTCTAACGGAGATATTTTTTATGTCAACAGATACTCCTGGGGCCCGGCCGACTACTTTGGATGGA
CTATGGGTGGTGCAAACAAAGGGAAGCTCGATGTTTTTATGATTATACTCTGGAAAATATGGGGCTTTCGGAACGACATTGTGAATAGTCATGGAGGAACGAACTGGTTT
AAGTTGAGTACACTTACTCAAATGGCAATTAGTGAATTTACCCAGGTCTCCACTAGCCAGGAGAAATTGCAGAGTCTAGGCCAAGTCATTACTTCTGATTGGATTCCCCC
AAACAGGGGTTGGTGGAGCCTCTGTACAGATGCCTCTAGGAATGATGCAATGGAAGCGGGCGGTATTGGCTGGATAGTTCGAAATTGTGAGGGTGAGGTGATCTGTGCGA
GTCATCAATTCATCAGAGATCAAGGGTCTATTCTAATTTTGGAGCTGATGGGAATCGTAAAGGGAATGAGATCTATCACGAATAGAGAAATTCCTCTAATGGTGGAATCA
GACTCTCTAGAGGCAATATTACTAATTGAAGGTAAGCTTGTGATTTACACAGAGGCAAGGGACTTAAGAGACATCATCTGGCAGCTGCGAGAGGAATGGTCACATATTAC
TTTCAGACATATTCACCGATCGACGAATAAGGAAGCGCACAATTTAGCTCAAAGGGCAACACGTTTGCATTCTGATGACTTTGGGTTTGAGGAGTCAACCAGGCTCCGAA
GCTTTATTAGCTAA
Protein sequenceShow/hide protein sequence
MVSPELAQSTVRILLKEDGEWDIDKIRRCFQEDDVGNILKIPRYEIHNNDEIVWKYNPRGIFTVKSAYRLGLQQRIAQEASSSNSEGVRNFWKSLWSVQIPNRIKICSWK
IIQSCLPTKDNLIRRGLEIDPWCPMCKKYPKSTCHLFWGCKVTRKFWRLFLPSNGDIFYVNRYSWGPADYFGWTMGGANKGKLDVFMIILWKIWGFRNDIVNSHGGTNWF
KLSTLTQMAISEFTQVSTSQEKLQSLGQVITSDWIPPNRGWWSLCTDASRNDAMEAGGIGWIVRNCEGEVICASHQFIRDQGSILILELMGIVKGMRSITNREIPLMVES
DSLEAILLIEGKLVIYTEARDLRDIIWQLREEWSHITFRHIHRSTNKEAHNLAQRATRLHSDDFGFEESTRLRSFIS