; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000224 (gene) of Snake gourd v1 genome

Gene IDTan0000224
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlycine-rich protein
Genome locationLG02:3700616..3701037
RNA-Seq ExpressionTan0000224
SyntenyTan0000224
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144531.1 glycine-rich protein [Cucumis sativus]7.1e-1557.52Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSHN------HCHHGCCHYHHGGCSRCCSFAGEA
        MSSK+FI LGLLFA VVLF+SE +TVTARD K +EATMET G VD+V+R              GG HS N       C+ GCC    G C RCCSFAGEA
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSHN------HCHHGCCHYHHGGCSRCCSFAGEA

Query:  --VDVQPQAKPNN
          VD +PQAKPNN
Subjt:  --VDVQPQAKPNN

XP_022136254.1 glycine-rich protein 3 short isoform-like [Momordica charantia]2.1e-1954.26Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKR----------GGSGRGRIRFGGGGGGHHSH--------------NHCHHGC
        M+SKAFI LGLLFA+VVL +S+   VTARD+KG E  MET GV D   R          GG  RG  R+GGG  GH  H               HCHHGC
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKR----------GGSGRGRIRFGGGGGGHHSH--------------NHCHHGC

Query:  CHYHHGGCSRCCSFAGEAVDVQPQAKPNN
        C Y HG C RCCS+AGEAVDV+PQAKP+N
Subjt:  CHYHHGGCSRCCSFAGEAVDVQPQAKPNN

XP_038888333.1 glycine-rich protein-like isoform X1 [Benincasa hispida]4.6e-2268.22Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSH--NHCHHGCCHYHHGGCSRCCSFAGEAVDVQ
        MSSKAFIFLGLLFAIVVLF+SEEVTV ARDVK EEA MET G VDDV+R G       FGGG   + +   + C+HGCC    G C RCCSFAGEAVDV+
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSH--NHCHHGCCHYHHGGCSRCCSFAGEAVDVQ

Query:  PQAKPNN
        PQAKPNN
Subjt:  PQAKPNN

XP_038888334.1 glycine-rich protein-like isoform X2 [Benincasa hispida]3.3e-2067.29Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSH--NHCHHGCCHYHHGGCSRCCSFAGEAVDVQ
        MSSKAFIFLGLLFAIVVLF+SEEVTV ARDVK  EA MET G VDDV+R G       FGGG   + +   + C+HGCC    G C RCCSFAGEAVDV+
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSH--NHCHHGCCHYHHGGCSRCCSFAGEAVDVQ

Query:  PQAKPNN
        PQAKPNN
Subjt:  PQAKPNN

XP_038888674.1 glycine-rich protein-like [Benincasa hispida]4.3e-2063.73Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKG-EEATMET-GGVVDDVKRGGSGRGRIRFGGGGGGHHSHNHCHHGCCHYHH-GGCSRCCSFAGEAVDV
        MSSKAFIFLG LF +VVL +SEEVT  A D+K  E+A MET GG  +DVKR      R R      GHH H HCHHGCC +HH GGCSRCCSFAGEAVD 
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKG-EEATMET-GGVVDDVKRGGSGRGRIRFGGGGGGHHSHNHCHHGCCHYHH-GGCSRCCSFAGEAVDV

Query:  QP
        +P
Subjt:  QP

TrEMBL top hitse value%identityAlignment
A0A0A0K5A1 Uncharacterized protein3.4e-1557.52Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSHN------HCHHGCCHYHHGGCSRCCSFAGEA
        MSSK+FI LGLLFA VVLF+SE +TVTARD K +EATMET G VD+V+R              GG HS N       C+ GCC    G C RCCSFAGEA
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSHN------HCHHGCCHYHHGGCSRCCSFAGEA

Query:  --VDVQPQAKPNN
          VD +PQAKPNN
Subjt:  --VDVQPQAKPNN

A0A5B7BPM5 Uncharacterized protein2.0e-1046.27Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDV-------KGEEATMETGGVVDDVKRG------GSGRGRIRFGG-----GGGGHHSHNH---------CH
        M+SKA +FLGL  AIV+L TSE   V ARD+       K  EA  ET G VDD K G      G G G    GG     GGGG +  NH         CH
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDV-------KGEEATMETGGVVDDVKRG------GSGRGRIRFGG-----GGGGHHSHNH---------CH

Query:  HGCCHYHH--GGCSRCCSFAGEAVDVQPQAKPNN
        HGCC   H   GC RCCS+AGEA+D + + KP+N
Subjt:  HGCCHYHH--GGCSRCCSFAGEAVDVQPQAKPNN

A0A6J1C3T3 glycine-rich protein 3 short isoform-like1.0e-1954.26Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKR----------GGSGRGRIRFGGGGGGHHSH--------------NHCHHGC
        M+SKAFI LGLLFA+VVL +S+   VTARD+KG E  MET GV D   R          GG  RG  R+GGG  GH  H               HCHHGC
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKR----------GGSGRGRIRFGGGGGGHHSH--------------NHCHHGC

Query:  CHYHHGGCSRCCSFAGEAVDVQPQAKPNN
        C Y HG C RCCS+AGEAVDV+PQAKP+N
Subjt:  CHYHHGGCSRCCSFAGEAVDVQPQAKPNN

A0A6J1ESD5 glycine-rich protein DC7.1-like3.3e-1053.27Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKG-EEATMETGG-VVDDVKRGGSGRGRIRFGGGGGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQ
        M+SKAFI LGLLF IV+L +SEE + TAR +K  EEA MET G  ++D KR        RFGGG  GH  H+  HH   H HH  C   CS A E V+  
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKG-EEATMETGG-VVDDVKRGGSGRGRIRFGGGGGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQ

Query:  PQAKPNN
        PQAKPNN
Subjt:  PQAKPNN

A0A6J1JMI7 glycine-rich protein DC7.1-like2.3e-1154.21Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKG-EEATMETGG-VVDDVKRGGSGRGRIRFGGGGGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQ
        M+SKAFI LGLLFA+V+L +SEE T TAR +K  EEA MET G  ++D KR        RF   GGGHH H H HH    +HH  C   CS A E V+  
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKG-EEATMETGG-VVDDVKRGGSGRGRIRFGGGGGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQ

Query:  PQAKPNN
        PQAKPNN
Subjt:  PQAKPNN

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein1.8e-0842.61Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSE----EVTVTARDVK--GEEATMETG-GVVDDVKRGGSGRGRIRFGGG---GGGHHSHNHCHHGCCHYHHGGCSRCCSF
        M SKAF+FLGL  A   L +SE    E+  T+  +K  GE      G G  +DV  GG G     +GGG   GGG +    C +GCC   + GC RCCS+
Subjt:  MSSKAFIFLGLLFAIVVLFTSE----EVTVTARDVK--GEEATMETG-GVVDDVKRGGSGRGRIRFGGG---GGGHHSHNHCHHGCCHYHHGGCSRCCSF

Query:  AGEAVDVQPQAKPNN
        AGEA+D   +A+P+N
Subjt:  AGEAVDVQPQAKPNN

P37704 Glycine-rich protein DC7.13.1e-0542.86Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQPQ
        M SK F+ LGL  A  +L +SE   V ARD+   E T E G  +D    GG G G    GGG GG H     H GC HY HG    CCS A        Q
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQPQ

Query:  AKPNN
         KP N
Subjt:  AKPNN

Q9SL15 Glycine-rich protein 32.2e-0653.45Show/hide
Query:  RGGSGR-----GRIRFGGG--GGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQP
        +GG GR     GR + GGG  GGG    ++C HGCC+  + GCSRCCS+AGEAV  QP
Subjt:  RGGSGR-----GRIRFGGG--GGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQP

Q9ZSJ6 Glycine-rich protein 3 short isoform3.4e-0436.28Show/hide
Query:  MSSKAFIFLGLL-FAIVVLFTSEEVTVTARDVKGEEATMETGGVVDD---VKRGGSGRGRIRFGG--GGGGHH---------SHNHCHHGCCHYHHGGCS
        M+SK  + LGL  F  +V   +   TV +   +  +     GG  D+     +GG G G    GG  GGGG +           ++C HGCC+  + GCS
Subjt:  MSSKAFIFLGLL-FAIVVLFTSEEVTVTARDVKGEEATMETGGVVDD---VKRGGSGRGRIRFGG--GGGGHH---------SHNHCHHGCCHYHHGGCS

Query:  RCCSFAGEAVDVQ
        RCCS+AGEAV  Q
Subjt:  RCCSFAGEAVDVQ

Arabidopsis top hitse value%identityAlignment
AT2G05520.1 glycine-rich protein 31.5e-0753.45Show/hide
Query:  RGGSGR-----GRIRFGGG--GGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQP
        +GG GR     GR + GGG  GGG    ++C HGCC+  + GCSRCCS+AGEAV  QP
Subjt:  RGGSGR-----GRIRFGGG--GGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQP

AT2G05520.2 glycine-rich protein 31.5e-0753.45Show/hide
Query:  RGGSGR-----GRIRFGGG--GGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQP
        +GG GR     GR + GGG  GGG    ++C HGCC+  + GCSRCCS+AGEAV  QP
Subjt:  RGGSGR-----GRIRFGGG--GGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQP

AT2G05520.4 glycine-rich protein 32.0e-0737.1Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATM---------ETGGVVDD---------VKRGGSGR-----GRIRFGGG--GGGHHSHNHCHHG
        M+SKA + LGL    V+L  SE    ++  V  E             + GG  ++           +GG GR     GR + GGG  GGG    ++C HG
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATM---------ETGGVVDD---------VKRGGSGR-----GRIRFGGG--GGGHHSHNHCHHG

Query:  CCHYHHGGCSRCCSFAGEAVDVQP
        CC+  + GCSRCCS+AGEAV  QP
Subjt:  CCHYHHGGCSRCCSFAGEAVDVQP

AT2G05520.5 glycine-rich protein 31.8e-0838.74Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEE---ATMETGGVVDDVKRGGSGRGRIRFGGG---------GGGHHSHNHCHHGCCHYHHGGCSRCC
        M+SKA + LGL    V+L  SE    ++  V  E       +  G  D+     +G GR + GGG         GGG    ++C HGCC+  + GCSRCC
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEE---ATMETGGVVDDVKRGGSGRGRIRFGGG---------GGGHHSHNHCHHGCCHYHHGGCSRCC

Query:  SFAGEAVDVQP
        S+AGEAV  QP
Subjt:  SFAGEAVDVQP

AT2G05520.6 glycine-rich protein 31.2e-0738.46Show/hide
Query:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATM---------ETGGVVDD---VKRGG----SGRGRIRFGGG--GGGHHSHNHCHHGCCHYHHG
        M+SKA + LGL    V+L  SE    ++  V  E             + GG  ++    + GG     G GR + GGG  GGG    ++C HGCC+  + 
Subjt:  MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATM---------ETGGVVDD---VKRGG----SGRGRIRFGGG--GGGHHSHNHCHHGCCHYHHG

Query:  GCSRCCSFAGEAVDVQP
        GCSRCCS+AGEAV  QP
Subjt:  GCSRCCSFAGEAVDVQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGCCATCGTCGTCCTCTTCACCTCGGAGGAGGTAACGGTTACAGCAAGAGACGTGAAAGGCGAAGAAGCTAC
GATGGAAACTGGCGGAGTTGTTGACGATGTCAAGCGCGGCGGTTCTGGAAGAGGCCGCATCAGATTCGGTGGCGGAGGCGGAGGCCACCACAGCCACAACCATTGCCACC
ATGGTTGTTGTCACTACCACCACGGCGGTTGCAGCAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGTACAGCCCCAAGCGAAGCCTAACAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGCCATCGTCGTCCTCTTCACCTCGGAGGAGGTAACGGTTACAGCAAGAGACGTGAAAGGCGAAGAAGCTAC
GATGGAAACTGGCGGAGTTGTTGACGATGTCAAGCGCGGCGGTTCTGGAAGAGGCCGCATCAGATTCGGTGGCGGAGGCGGAGGCCACCACAGCCACAACCATTGCCACC
ATGGTTGTTGTCACTACCACCACGGCGGTTGCAGCAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGTACAGCCCCAAGCGAAGCCTAACAACTAA
Protein sequenceShow/hide protein sequence
MSSKAFIFLGLLFAIVVLFTSEEVTVTARDVKGEEATMETGGVVDDVKRGGSGRGRIRFGGGGGGHHSHNHCHHGCCHYHHGGCSRCCSFAGEAVDVQPQAKPNN