CuGenDBv2

Gene ID	Tan0000229
Organism	Trichosanthes anguina (Snake gourd v1)
Description	TPR_REGION domain-containing protein
Genome location	LG02:93297618..93298301
RNA-Seq Expression	Tan0000229
Synteny	Tan0000229
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7020255.1 hypothetical protein SDJN02_16938, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.5e-73

77.17

Show/hide

Query:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH
        V DILLQIA          LILVMVV FL  HNI QRF A L  RFR  VESKRHFVRGAQLLARA+SAPSRSS    A++ VAEADKAIAL+PKDAAAH
Subjt:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH

Query:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA
        ILKALALDI GF+TSALESLD ALSP AAKSLS+EERGDAL+KRAELKM  NRR++V+SAL DLTES+TLS+NANAYC LGKCYE KKLRGEAKKAYEEA
Subjt:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA

Query:  LIIEPRFSNAREALERLSA
        L IEPR S AREALERLS+
Subjt:  LIIEPRFSNAREALERLSA

XP_022951869.1 uncharacterized protein LOC111454602 [Cucurbita moschata]

4.2e-73

77.63

Show/hide

Query:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH
        V DILLQIA          LILVMVV FL  HNI QRF A L  RFR  VESKRHFVRGAQLLARA+SAPSRSS    A++ VAEADKAIAL+PKDAAAH
Subjt:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH

Query:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA
        ILKALALDI GFKTSALESLD ALSP AAKSLS+EERGDAL+KRAELKM  NRR++V+SAL DLTES+TLS+NANAYC LGKCYE KKLRGEAKKAYEEA
Subjt:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA

Query:  LIIEPRFSNAREALERLSA
        L IEPR S AREALERLS+
Subjt:  LIIEPRFSNAREALERLSA

XP_023002879.1 uncharacterized protein LOC111496615 [Cucurbita maxima]

7.2e-73

77.52

Show/hide

Query:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH
        V DILLQIA          LILVMVV FL  HNI QRF A L  RFR  VESKRHFVRGAQLLARA+SAPSRSS    A++ VAEADKAIAL+PKDAAAH
Subjt:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH

Query:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA
        ILKALALDI GFKTSALESLD ALSP AAKSLS+EERGDAL+KRAELKM  NRR++V+SA+ DLTES+TLS+NANAYC LGKCYE KKLRGEAKKAYEEA
Subjt:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA

Query:  LIIEPRFSNAREALERLS
        L IEPR S AREALERLS
Subjt:  LIIEPRFSNAREALERLS

XP_023537835.1 uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]

4.2e-73

77.63

Show/hide

Query:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH
        V DILLQIA          LILVMVV FL  HNI QRF A L  RFR  VESKRHFVRGAQLLARA+SAPSRSS    A++ VAEADKAIAL+PKDAAAH
Subjt:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH

Query:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA
        ILKALALDI GFKTSALESLD ALSP AAKSLS+EERGDAL+KRAELKM  NRR++V+SAL DLTES+TLS+NANAYC LGKCYE KKLRGEAKKAYEEA
Subjt:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA

Query:  LIIEPRFSNAREALERLSA
        L IEPR S AREALERLS+
Subjt:  LIIEPRFSNAREALERLSA

XP_038884950.1 uncharacterized protein LOC120075535 [Benincasa hispida]

1.9e-73

78.54

Show/hide

Query:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH
        VTDILLQI           LILVMVV FL  HNI QR+ A L LRFR  VESKRHFVRGAQLLARA+SAPSRSS    A+E VAEADKAIAL+PKDAAAH
Subjt:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH

Query:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA
        ILKALALDI GFKTSALESLD ALSP  AKSLSDEERGDALFKRAELKM  NRR+LV+SAL DLTES+TLS+NAN+Y  LGKCYE KKLRGEAKKAYEEA
Subjt:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA

Query:  LIIEPRFSNAREALERLSA
        L IEPR SNAREALERLS+
Subjt:  LIIEPRFSNAREALERLSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPL8 TPR_REGION domain-containing protein

2.3e-72

77.63

Show/hide

Query:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH
        VTDILLQIA          LILVMVV FL  HNI QR+ A L LRFR  VESKRHFVRGAQLLARA+SAPSRSS    A+E VAEA+KAIAL+PKDAAAH
Subjt:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH

Query:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA
        ILKALALD  GFKTSALESLD ALSP  AKSLSDEERGDALFKRAELKM  NRR+LV+SAL DLTES+TLS+NAN+Y  LGKCYE KKLR EAKKAYEEA
Subjt:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA

Query:  LIIEPRFSNAREALERLSA
        L IEPR SNAREALERLS+
Subjt:  LIIEPRFSNAREALERLSA

A0A1S3BC86 uncharacterized protein LOC103488119

7.8e-73

77.63

Show/hide

Query:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH
        VTDILLQIA          LILVMVV FL  HNI QR+ A L LRFR  VESKRHFVRGAQLLARA+SAPSRSS    A+E VAEA+KAIAL+PKDAAAH
Subjt:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH

Query:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA
        ILKALALD+ GFKTSALESLD ALSP  AKSLSDEERGDALFKRAELKM  NRR+LV+SAL DLTES+TLS+NAN+Y  LGKCYE KKLR EAKKAYEEA
Subjt:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA

Query:  LIIEPRFSNAREALERLSA
        L IEPR SNAREALERLS+
Subjt:  LIIEPRFSNAREALERLSA

A0A5A7VBU3 TPR domain protein

7.8e-73

77.63

Show/hide

Query:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH
        VTDILLQIA          LILVMVV FL  HNI QR+ A L LRFR  VESKRHFVRGAQLLARA+SAPSRSS    A+E VAEA+KAIAL+PKDAAAH
Subjt:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH

Query:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA
        ILKALALD+ GFKTSALESLD ALSP  AKSLSDEERGDALFKRAELKM  NRR+LV+SAL DLTES+TLS+NAN+Y  LGKCYE KKLR EAKKAYEEA
Subjt:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA

Query:  LIIEPRFSNAREALERLSA
        L IEPR SNAREALERLS+
Subjt:  LIIEPRFSNAREALERLSA

A0A6J1GK03 uncharacterized protein LOC111454602

2.1e-73

77.63

Show/hide

Query:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH
        V DILLQIA          LILVMVV FL  HNI QRF A L  RFR  VESKRHFVRGAQLLARA+SAPSRSS    A++ VAEADKAIAL+PKDAAAH
Subjt:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH

Query:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA
        ILKALALDI GFKTSALESLD ALSP AAKSLS+EERGDAL+KRAELKM  NRR++V+SAL DLTES+TLS+NANAYC LGKCYE KKLRGEAKKAYEEA
Subjt:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA

Query:  LIIEPRFSNAREALERLSA
        L IEPR S AREALERLS+
Subjt:  LIIEPRFSNAREALERLSA

A0A6J1KRQ5 uncharacterized protein LOC111496615

3.5e-73

77.52

Show/hide

Query:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH
        V DILLQIA          LILVMVV FL  HNI QRF A L  RFR  VESKRHFVRGAQLLARA+SAPSRSS    A++ VAEADKAIAL+PKDAAAH
Subjt:  VTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSS----AKEAVAEADKAIALNPKDAAAH

Query:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA
        ILKALALDI GFKTSALESLD ALSP AAKSLS+EERGDAL+KRAELKM  NRR++V+SA+ DLTES+TLS+NANAYC LGKCYE KKLRGEAKKAYEEA
Subjt:  ILKALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEA

Query:  LIIEPRFSNAREALERLS
        L IEPR S AREALERLS
Subjt:  LIIEPRFSNAREALERLS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

2.1e-30

43.52

Show/hide

Query:  LILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAP----SRSSAKEAVAEADKAIALNPKDAAAHILKALALDIPGFKTSALES
        L+L +V+ +  K+ + QR +     + R  ++++R  ++ ++LLARA++ P    S+S AK A+ EAD  IA++P DAA HI++ALALD+ G  TSAL+S
Subjt:  LILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAP----SRSSAKEAVAEADKAIALNPKDAAAHILKALALDIPGFKTSALES

Query:  LDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSR---NANAYCLLGKCYEKKKLRGEAKKAYEEALIIEPRFSN
         D+AL+ P  KSLS  ER DAL KRAE+K+  NRR  ++SA+ DL E++ L+     A  + LLG+CYE K L+ +A+ A+ EAL  +P   N
Subjt:  LDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSR---NANAYCLLGKCYEKKKLRGEAKKAYEEALIIEPRFSN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATTTGCAAGCAGTTCAGAGATCGATAAAGACAGTGACCGACATACTTCTTCAAATTGCTCTCGGCATACTCCCTCAAATTGCTCTGTATCTCATCCTCGTAATGGT
CGTGGAGTTTCTCGATAAGCACAACATTCGACAGAGATTCATTGCCAATCTCCCATTGCGCTTTCGAGTCGGTGTCGAATCGAAACGCCACTTCGTGAGAGGCGCTCAGC
TTCTCGCTCGAGCGAAATCTGCTCCGTCGCGTTCCTCGGCGAAAGAAGCCGTAGCGGAAGCCGATAAAGCTATCGCTCTCAATCCTAAGGATGCCGCTGCTCACATCCTC
AAGGCTCTGGCTCTCGACATTCCAGGATTCAAGACCTCTGCTCTGGAATCACTCGATGTGGCTCTGTCACCGCCCGCCGCAAAGTCGCTCAGCGACGAGGAGCGAGGCGA
CGCGTTGTTCAAGCGAGCTGAGTTGAAGATGTACTTCAATCGGCGATCCTTAGTTGAGTCGGCTTTGACTGACTTGACAGAGTCTATGACGCTGAGTCGGAATGCGAATG
CCTATTGTTTGTTGGGGAAATGCTACGAGAAGAAGAAACTGAGAGGAGAGGCAAAGAAAGCATATGAAGAAGCGTTGATCATCGAACCACGATTTTCCAATGCTCGGGAG
GCATTGGAACGCCTATCGGCGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNLQAVQRSIKTVTDILLQIALGILPQIALYLILVMVVEFLDKHNIRQRFIANLPLRFRVGVESKRHFVRGAQLLARAKSAPSRSSAKEAVAEADKAIALNPKDAAAHIL
KALALDIPGFKTSALESLDVALSPPAAKSLSDEERGDALFKRAELKMYFNRRSLVESALTDLTESMTLSRNANAYCLLGKCYEKKKLRGEAKKAYEEALIIEPRFSNARE
ALERLSA

Tan0000229 (gene) of Snake gourd v1 genome