; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000290 (gene) of Snake gourd v1 genome

Gene IDTan0000290
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionATP-dependent Clp protease adapter protein CLPS1, chloroplastic
Genome locationLG04:7583447..7586017
RNA-Seq ExpressionTan0000290
SyntenyTan0000290
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:0005840 - ribosome (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446565.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Cucumis melo]4.6e-8294.97Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLA+SPNHVFNPKPGDRSS+CKGLC N GASVVKSA TAGRGGGLLERPVIEKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSS+EPA+GGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC

XP_011655763.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus]8.6e-8195.6Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLALSPNHVFNPKPGDRSSVCKGLC N GASVVKSA TAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAE HCMQLRGNGLLSS+EPA+GGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC

XP_022150471.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Momordica charantia]1.5e-8092.45Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLALSPNHVFNP+PGD++ VC+GLCS+LGA++VKSATTAG+GGGLLERPVIEKATPGRESEFDLRRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSS+EPA+GGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC

XP_022968529.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita maxima]1.6e-7995Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV
        MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCS L ASVVKSATTAGR GGGLLERPVIEKATPGRESEFDLRRSRK TPPYRVILHNDDFN+REYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC
        LMKVIPGMTLDNAVNIMQEAH NGLSLVIICAQADAEEHCMQLRGNGLLSS+EPA+GGCC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC

XP_038891525.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2 [Benincasa hispida]3.5e-8296.23Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSN GASVVKSA TAGRGGGLLERPVIEKATPGRESEFDLR+SRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC
        MKVIPGMTLDNAVNIMQEAH NGLSLVIICAQADAEEHCMQLRGNGLLSS+EPA+GGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC

TrEMBL top hitse value%identityAlignment
A0A0A0KWD9 ClpS domain-containing protein4.2e-8195.6Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLALSPNHVFNPKPGDRSSVCKGLC N GASVVKSA TAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAE HCMQLRGNGLLSS+EPA+GGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC

A0A1S3BG61 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X12.2e-8294.97Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLA+SPNHVFNPKPGDRSS+CKGLC N GASVVKSA TAGRGGGLLERPVIEKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSS+EPA+GGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC

A0A5A7STJ9 ATP-dependent Clp protease adapter protein CLPS12.2e-8294.97Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLA+SPNHVFNPKPGDRSS+CKGLC N GASVVKSA TAGRGGGLLERPVIEKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSS+EPA+GGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC

A0A6J1DBL1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic7.1e-8192.45Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAICGKLALSPNHVFNP+PGD++ VC+GLCS+LGA++VKSATTAG+GGGLLERPVIEKATPGRESEFDLRRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSS+EPA+GGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC

A0A6J1HZX0 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like7.9e-8095Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV
        MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCS L ASVVKSATTAGR GGGLLERPVIEKATPGRESEFDLRRSRK TPPYRVILHNDDFN+REYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGR-GGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC
        LMKVIPGMTLDNAVNIMQEAH NGLSLVIICAQADAEEHCMQLRGNGLLSS+EPA+GGCC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic4.2e-2248.62Show/hide
Query:  GGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLS
        GG+++ P     T  ++    + RS+K  P Y+V+LHND++NKREYVV+VL+KV+  +T+D+AV  MQEAH  G++LV+ C Q +AE +C  LR NGL S
Subjt:  GGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLS

Query:  SVEPANGGC
        ++EP  GGC
Subjt:  SVEPANGGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS3.4e-1958.23Show/hide
Query:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEP
        RK+ P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    AE +C QL+ +GL SS+EP
Subjt:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS4.2e-1442.55Show/hide
Query:  TPGRESEFDL--RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEP
        +PG  +  D    R RK +P Y+V+LHND  N  EYV+  L +V+P ++  +A+ +M EAH  G+ LVI+C    AE +C  L+  GL SS+EP
Subjt:  TPGRESEFDL--RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS1.2e-1657.53Show/hide
Query:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGL
        RK+ P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    AE +C QL+ +GL
Subjt:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.4e-6272.33Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV
        ME AICG+LAL+P+ +FN K GD+  V KG C N    +  S + A G+GGG+L++P+IEK TPGRESEFDLR+S+K+ PPYRVILHND+FNKREYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGC
        LMKVIPGMT+DNAVNIMQEAH NGL++VI+CAQADAE+HCMQLRGNGLLSSVEP  GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.0e-6372.33Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV
        ME AICG+LAL+P+ +FN K GD+  V KG C N    +  S + A G+GGG+L++P+IEK TPGRESEFDLR+S+K+ PPYRVILHND+FNKREYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGC
        LMKVIPGMT+DNAVNIMQEAH NGL++VI+CAQADAE+HCMQLRGNGLLSSVEP  GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein2.6e-4356.6Show/hide
Query:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV
        ME AICG+LAL+P+ +FN K GD+  V KG C N    +  S + A G+GGG+L++P+IEK TPGRESEFDLR+S+K+ PPYRVILHND+FNKREYVVQV
Subjt:  MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTA-GRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGC
        LMK                              ADAE+HCMQLRGNGLLSSVEP  GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCGATTTGCGGGAAATTAGCTCTCTCACCCAACCATGTCTTCAACCCCAAACCAGGGGACAGAAGTTCTGTGTGTAAAGGGCTGTGCTCAAACTTAGGTGC
ATCGGTTGTTAAATCAGCCACAACAGCAGGAAGAGGAGGAGGGTTGTTGGAGAGGCCTGTTATTGAGAAAGCTACTCCTGGAAGAGAATCTGAGTTTGATTTGAGGAGAT
CAAGGAAAATGACACCGCCATATCGTGTCATTCTGCATAATGACGACTTCAATAAACGAGAATACGTCGTTCAAGTCCTGATGAAAGTCATCCCCGGAATGACACTCGAC
AATGCAGTTAACATCATGCAAGAAGCTCACTACAATGGCTTGTCACTGGTGATCATTTGTGCTCAGGCTGATGCTGAAGAACACTGCATGCAGCTCAGAGGCAATGGGCT
GTTAAGTTCAGTTGAACCTGCAAATGGTGGATGCTGTTAA
mRNA sequenceShow/hide mRNA sequence
CGTCCCTAGACCTCCGCTTTTTCCAGTCCCCGTTCTGAAAACGAATCAGTCCACTTCCATTTTTCTAATTTCTCCTTCTCCAATTTTTTATTCTTTAGAAGAATCAGAAG
AAATATTTCCCATCCGAACCGATTTTCTGTTTCAGATTGACGGGAGGAGAAGTCATGGAGATTGCGATTTGCGGGAAATTAGCTCTCTCACCCAACCATGTCTTCAACCC
CAAACCAGGGGACAGAAGTTCTGTGTGTAAAGGGCTGTGCTCAAACTTAGGTGCATCGGTTGTTAAATCAGCCACAACAGCAGGAAGAGGAGGAGGGTTGTTGGAGAGGC
CTGTTATTGAGAAAGCTACTCCTGGAAGAGAATCTGAGTTTGATTTGAGGAGATCAAGGAAAATGACACCGCCATATCGTGTCATTCTGCATAATGACGACTTCAATAAA
CGAGAATACGTCGTTCAAGTCCTGATGAAAGTCATCCCCGGAATGACACTCGACAATGCAGTTAACATCATGCAAGAAGCTCACTACAATGGCTTGTCACTGGTGATCAT
TTGTGCTCAGGCTGATGCTGAAGAACACTGCATGCAGCTCAGAGGCAATGGGCTGTTAAGTTCAGTTGAACCTGCAAATGGTGGATGCTGTTAAAGCCTTCTCATCACTG
GATTATACATTTATGTGTATTTAAGCTACTCTTCATAACTGAAGGCAAGGAGATAGTTTGGGATTGAAAAAGCAAAAAAAAAAAAAAAAAGGAAAAGAAACTGGTAATTA
AGTATTGGAGAACTCCTATGATATTCTGTTTTGGGAGTAGAAAAAACTCTTCTTTCTTTTTTTTTTTCGTTCTTCTTTGATTATTTTAATTGTGTTTCTGTTAACCCAAA
AAGGAAAGTACATATTCGAGAATTGTATATGAAAAACTATCCAGATAGATTGATGTGATAAATTATTAACAGAGAAAAAATGTAAATCTTTTGTTCATGTG
Protein sequenceShow/hide protein sequence
MEIAICGKLALSPNHVFNPKPGDRSSVCKGLCSNLGASVVKSATTAGRGGGLLERPVIEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLD
NAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSVEPANGGCC