; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000309 (gene) of Snake gourd v1 genome

Gene IDTan0000309
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine/arginine repetitive matrix protein 1-like
Genome locationLG05:82630335..82634881
RNA-Seq ExpressionTan0000309
SyntenyTan0000309
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573173.1 hypothetical protein SDJN03_27060, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3255.56Show/hide
Query:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ
        M+RGIISPPRSRSSPR E+R  NNN  TNPPS+PNYMSP RRPTTP+NPNEL R+HRKE   Q T + RPTK   +RSSN  RIDPS+ + SK A  R  
Subjt:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ

Query:  VAAPPNSNEKKLE-NTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD------VNQKP
          A P+ NE+KL+  T PKT T+      SSPR TKPI+ P  SKSN    GA G GSRSD   AK S   K  +PK LRSG L  QQD       +   
Subjt:  VAAPPNSNEKKLE-NTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD------VNQKP

Query:  YAA--LGDPHVRHQLNQLSIDVNEL
        Y A  L DP V H+L+QLS+D  +L
Subjt:  YAA--LGDPHVRHQLNQLSIDVNEL

KAG7012356.1 hypothetical protein SDJN02_25108, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-3255.56Show/hide
Query:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ
        M+RGIISPPRSRSSPR E+R  NNN  TNPPS+PNYMSP RRPTTP+NPNEL R+HRKE   Q T + RPTK   +RSSN  RIDPS+ + SK A  R  
Subjt:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ

Query:  VAAPPNSNEKKLE-NTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD------VNQKP
          A P+ NE+KL+  T PKT T+      SSPR TKPI+ P  SKSN    GA G GSRSD   AK S   K  +PK LRSG L  QQD       +   
Subjt:  VAAPPNSNEKKLE-NTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD------VNQKP

Query:  YAA--LGDPHVRHQLNQLSIDVNEL
        Y A  L DP V H+L+QLS+D  +L
Subjt:  YAA--LGDPHVRHQLNQLSIDVNEL

XP_022954810.1 serine/arginine repetitive matrix protein 1-like [Cucurbita moschata]2.4e-3255.56Show/hide
Query:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ
        M+RGIISPPRSRSSPR E+R  NNN  TNPPS+PNYMSP RRPTTP+NPNEL R+HRKE   Q T + RPTK   +RSSN  RIDPS+ + SK A  R  
Subjt:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ

Query:  VAAPPNSNEKKLE-NTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD------VNQKP
          A P+ NE+KL+  T PKT T+      SSPR TKPI+ P  SKSN    GA G GSRSD   AK S   K  +PK LRSG L  QQD       +   
Subjt:  VAAPPNSNEKKLE-NTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD------VNQKP

Query:  YAA--LGDPHVRHQLNQLSIDVNEL
        Y A  L DP V H+L+QLS+D  +L
Subjt:  YAA--LGDPHVRHQLNQLSIDVNEL

XP_022994450.1 sporozoite surface protein 2-like [Cucurbita maxima]1.1e-2958.51Show/hide
Query:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ
        M+RGIISPPRSRSSPR E+R  NNN  TNPPSKPNYMSP RRPTTP+NPNEL R+HRKE   Q T + RPTK   +RSSN  RIDPS+ ++    S    
Subjt:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ

Query:  VAAPPNSNEKKLENTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD
          A P+ NEKKL+  T KT T+      SSPR TKPI+ P +   +NVK GA G GSRSD   AK S   K  SPK LRSG L  QQD
Subjt:  VAAPPNSNEKKLENTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD

XP_023542694.1 uncharacterized protein LOC111802521 [Cucurbita pepo subsp. pepo]5.9e-3153.78Show/hide
Query:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ
        M+RGIISPPRSRSSPR E+R  NNN  TNPPS+PNYMSP RRPTTP+N NEL R+HRKE   Q T + RPTK   +RSSN  RIDPS+ ++    S    
Subjt:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ

Query:  VAAPPNSNEKKLE-NTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD------VNQKP
          A P+ NE+KL+  T PKT T+      SSPR TKPI+ P  SKSN    GA G GSRSD   AK S   K  +PK LRSG L  QQD       +   
Subjt:  VAAPPNSNEKKLE-NTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD------VNQKP

Query:  YAA--LGDPHVRHQLNQLSIDVNEL
        Y A  L DP V H+L+QLS+D  +L
Subjt:  YAA--LGDPHVRHQLNQLSIDVNEL

TrEMBL top hitse value%identityAlignment
A0A6J1C5Z8 uncharacterized protein LOC1110085881.1e-1139.74Show/hide
Query:  LRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAIRPTKMNKERSSNIARIDPSKSSASKTASLRRQVA
        LRG+ISPPRSRSSPR + R HNN A  NPPS+PNYMSP RRPTT     +  ++HRK     +TA R TK +        RI PS    +     RR   
Subjt:  LRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAIRPTKMNKERSSNIARIDPSKSSASKTASLRRQVA

Query:  APPNS--NEKKLENTTPKTATKISARPSSSPRT--------TKPISQPTASKSNNV----KGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD
          PN   N+KKL+    KT  KI     SSPRT         +P   PT    N         AI   SRSD   A +S      S K+L S G     D
Subjt:  APPNS--NEKKLENTTPKTATKISARPSSSPRT--------TKPISQPTASKSNNV----KGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD

Query:  V-NQKPYAA-----LGDPHVRHQLNQLSIDVNEL
        + N  PY+      L DP + + L +LSID  +L
Subjt:  V-NQKPYAA-----LGDPHVRHQLNQLSIDVNEL

A0A6J1C7L7 uncharacterized protein LOC1110089863.9e-0433.49Show/hide
Query:  RGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTP--VNPNELQRSHRKEKITQSTAIRPTKMNKERSSNIARIDPSKSSASKTASLRRQV
        RG+ISPP+SR S         NNA  NPPS PNYMS  RR T    VNP + Q +H K     S AIR TK +  + + +    PS+         RR  
Subjt:  RGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTP--VNPNELQRSHRKEKITQSTAIRPTKMNKERSSNIARIDPSKSSASKTASLRRQV

Query:  AAPPNSNEKKLENTTPKTATKISARPSSSPRTTKPISQPTASKSNNV-KGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQDVNQKPYAALGDP
         AP N N     +TT  T  KI+   +S+    +   QP      +V  G + G G   D       G  +DS+                      +G P
Subjt:  AAPPNSNEKKLENTTPKTATKISARPSSSPRTTKPISQPTASKSNNV-KGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQDVNQKPYAALGDP

Query:  HVRHQLNQLSID
        HV +QL QLSID
Subjt:  HVRHQLNQLSID

A0A6J1GTG4 serine/arginine repetitive matrix protein 1-like1.2e-3255.56Show/hide
Query:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ
        M+RGIISPPRSRSSPR E+R  NNN  TNPPS+PNYMSP RRPTTP+NPNEL R+HRKE   Q T + RPTK   +RSSN  RIDPS+ + SK A  R  
Subjt:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ

Query:  VAAPPNSNEKKLE-NTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD------VNQKP
          A P+ NE+KL+  T PKT T+      SSPR TKPI+ P  SKSN    GA G GSRSD   AK S   K  +PK LRSG L  QQD       +   
Subjt:  VAAPPNSNEKKLE-NTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD------VNQKP

Query:  YAA--LGDPHVRHQLNQLSIDVNEL
        Y A  L DP V H+L+QLS+D  +L
Subjt:  YAA--LGDPHVRHQLNQLSIDVNEL

A0A6J1K179 sporozoite surface protein 2-like5.4e-3058.51Show/hide
Query:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ
        M+RGIISPPRSRSSPR E+R  NNN  TNPPSKPNYMSP RRPTTP+NPNEL R+HRKE   Q T + RPTK   +RSSN  RIDPS+ ++    S    
Subjt:  MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAI-RPTKMNKERSSNIARIDPSKSSASKTASLRRQ

Query:  VAAPPNSNEKKLENTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD
          A P+ NEKKL+  T KT T+      SSPR TKPI+ P +   +NVK GA G GSRSD   AK S   K  SPK LRSG L  QQD
Subjt:  VAAPPNSNEKKLENTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAGAGGCATTATCAGTCCCCCAAGATCCCGATCTTCTCCCAGATCAGAAACCAGAGCACATAACAACAATGCAACCACCAATCCGCCGTCCAAACCCAATTACAT
GTCCCCATGTCGGCGGCCGACGACACCCGTCAATCCCAACGAGCTGCAACGAAGTCATAGAAAAGAAAAAATCACCCAATCCACCGCTATACGGCCAACCAAAATGAACA
AGGAGAGATCTTCAAATATTGCACGCATCGACCCATCAAAATCTAGTGCTTCAAAGACTGCATCCTTAAGGCGACAAGTAGCAGCACCCCCAAATTCAAACGAGAAGAAA
TTAGAGAACACGACCCCCAAAACGGCCACTAAAATCAGCGCTAGACCATCTTCTTCCCCTCGTACAACCAAACCAATAAGTCAACCGACGGCTTCAAAGAGCAATAATGT
AAAAGGAGGAGCGATTGGCTGTGGTTCGAGATCCGATATTTGTGGTGCCAAAGCAAGCGGCGTTGCCAAGGATAGTTCTCCCAAGTATTTGCGGAGCGGTGGGTTGGGTC
CTCAGCAAGATGTGAATCAAAAACCTTATGCTGCTCTTGGTGATCCTCATGTTCGTCATCAGTTAAATCAGCTTTCTATTGACGTTAACGAGCTGCAAGTTGATCAAAAT
GAAGTTACAAGCTTCCCCATTGAGCCATTGCTCATAGACCTTGGCTCTCCTAAAAGGCGCGCACTTTACTGGCTGTCACATGCCAAACCGAATTCCAAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAAGAGGCATTATCAGTCCCCCAAGATCCCGATCTTCTCCCAGATCAGAAACCAGAGCACATAACAACAATGCAACCACCAATCCGCCGTCCAAACCCAATTACAT
GTCCCCATGTCGGCGGCCGACGACACCCGTCAATCCCAACGAGCTGCAACGAAGTCATAGAAAAGAAAAAATCACCCAATCCACCGCTATACGGCCAACCAAAATGAACA
AGGAGAGATCTTCAAATATTGCACGCATCGACCCATCAAAATCTAGTGCTTCAAAGACTGCATCCTTAAGGCGACAAGTAGCAGCACCCCCAAATTCAAACGAGAAGAAA
TTAGAGAACACGACCCCCAAAACGGCCACTAAAATCAGCGCTAGACCATCTTCTTCCCCTCGTACAACCAAACCAATAAGTCAACCGACGGCTTCAAAGAGCAATAATGT
AAAAGGAGGAGCGATTGGCTGTGGTTCGAGATCCGATATTTGTGGTGCCAAAGCAAGCGGCGTTGCCAAGGATAGTTCTCCCAAGTATTTGCGGAGCGGTGGGTTGGGTC
CTCAGCAAGATGTGAATCAAAAACCTTATGCTGCTCTTGGTGATCCTCATGTTCGTCATCAGTTAAATCAGCTTTCTATTGACGTTAACGAGCTGCAAGTTGATCAAAAT
GAAGTTACAAGCTTCCCCATTGAGCCATTGCTCATAGACCTTGGCTCTCCTAAAAGGCGCGCACTTTACTGGCTGTCACATGCCAAACCGAATTCCAAAGTTTAG
Protein sequenceShow/hide protein sequence
MLRGIISPPRSRSSPRSETRAHNNNATTNPPSKPNYMSPCRRPTTPVNPNELQRSHRKEKITQSTAIRPTKMNKERSSNIARIDPSKSSASKTASLRRQVAAPPNSNEKK
LENTTPKTATKISARPSSSPRTTKPISQPTASKSNNVKGGAIGCGSRSDICGAKASGVAKDSSPKYLRSGGLGPQQDVNQKPYAALGDPHVRHQLNQLSIDVNELQVDQN
EVTSFPIEPLLIDLGSPKRRALYWLSHAKPNSKV