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Tan0000325 (gene) of Snake gourd v1 genome

Gene IDTan0000325
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein CASPARIAN STRIP INTEGRITY FACTOR 1
Genome locationLG05:13974814..13977878
RNA-Seq ExpressionTan0000325
SyntenyTan0000325
Gene Ontology termsGO:0010039 - response to iron ion (biological process)
GO:0010447 - response to acidic pH (biological process)
GO:0055072 - iron ion homeostasis (biological process)
GO:2000067 - regulation of root morphogenesis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0048226 - Casparian strip (cellular component)
InterPro domainsIPR038974 - Protein Casparian strip integrity factor 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460971.1 PREDICTED: uncharacterized protein LOC103499698 [Cucumis melo]7.5e-2981.32Show/hide
Query:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRG-EMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        M +KYKLSFIFILLLSTSFLS++   GRPSKLV E   NGGVV +DAK+K+RG EMEDIIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRG-EMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
XP_011649242.1 protein CASPARIAN STRIP INTEGRITY FACTOR 2 [Cucumis sativus]2.0e-2981.11Show/hide
Query:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        M +KYKLSFIFILLLSTSFLST+   GRPSKLV E    GGVV +D K+K+RGEME+IIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
Subjt:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
XP_022146128.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1 [Momordica charantia]7.7e-2673.03Show/hide
Query:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVV-QDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        M +KYK SF+F LL+STS LST +  GRPSKLV +A  GGVV QD ++K  GEMED IHERLLR NTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVV-QDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
XP_022986650.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Cucurbita maxima]7.7e-2670.65Show/hide
Query:  MGVMLIKYKLSFI-FILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        +G+M  KYKL F+ F LLLSTSF ST+   GRPSKLVHE  NG V +  K+ +R EMED +HERLLRVNTKDYGRYDPSP+FVKPPFKLIPN
Subjt:  MGVMLIKYKLSFI-FILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
XP_038902215.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Benincasa hispida]9.8e-2982.22Show/hide
Query:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        M +KYKLSFIFILLLSTSFLST+   GRPSKLV E   NGGVV +DAK+K+RGEMED IHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
TrEMBL top hitse value%identityAlignment
A0A0A0LJ22 Uncharacterized protein9.5e-3081.11Show/hide
Query:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        M +KYKLSFIFILLLSTSFLST+   GRPSKLV E    GGVV +D K+K+RGEME+IIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
Subjt:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
A0A1S3CEV9 uncharacterized protein LOC1034996983.6e-2981.32Show/hide
Query:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRG-EMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        M +KYKLSFIFILLLSTSFLS++   GRPSKLV E   NGGVV +DAK+K+RG EMEDIIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRG-EMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
A0A5A7TUS0 Uncharacterized protein3.6e-2981.32Show/hide
Query:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRG-EMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        M +KYKLSFIFILLLSTSFLS++   GRPSKLV E   NGGVV +DAK+K+RG EMEDIIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHE-ATNGGVV-QDAKKKSRG-EMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
A0A6J1CXR3 protein CASPARIAN STRIP INTEGRITY FACTOR 13.8e-2673.03Show/hide
Query:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVV-QDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        M +KYK SF+F LL+STS LST +  GRPSKLV +A  GGVV QD ++K  GEMED IHERLLR NTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVV-QDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
A0A6J1JEM0 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like3.8e-2670.65Show/hide
Query:  MGVMLIKYKLSFI-FILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        +G+M  KYKL F+ F LLLSTSF ST+   GRPSKLVHE  NG V +  K+ +R EMED +HERLLRVNTKDYGRYDPSP+FVKPPFKLIPN
Subjt:  MGVMLIKYKLSFI-FILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
SwissProt top hitse value%identityAlignment
O65684 Protein CASPARIAN STRIP INTEGRITY FACTOR 21.3e-0739.56Show/hide
Query:  MGVMLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MG++ +  KL FI  LL+S S  + + + GR S L++        Q+       E     HER+LR+N++DYG   P P  V+PPFKLIPN
Subjt:  MGVMLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
Q84MD2 Protein CASPARIAN STRIP INTEGRITY FACTOR 12.8e-1049.4Show/hide
Query:  KLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        KL FIF +++S S LS  +  GRPS  VH+  N  + ++  ++S  E     HERLLR+NTKDYG   PSP   +PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
Arabidopsis top hitse value%identityAlignment
AT2G16385.1 unknown protein2.0e-1149.4Show/hide
Query:  KLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        KL FIF +++S S LS  +  GRPS  VH+  N  + ++  ++S  E     HERLLR+NTKDYG   PSP   +PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
AT4G34600.1 unknown protein9.2e-0939.56Show/hide
Query:  MGVMLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
        MG++ +  KL FI  LL+S S  + + + GR S L++        Q+       E     HER+LR+N++DYG   P P  V+PPFKLIPN
Subjt:  MGVMLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTCATGCTTATCAAGTATAAGCTCAGCTTCATCTTCATCCTCCTTCTTTCAACCTCCTTTTTATCCACCGTTTACACGGAAGGTCGACCTTCTAAGTTAGTTCA
TGAGGCTACTAATGGTGGAGTTGTGCAGGATGCAAAGAAGAAGTCAAGAGGTGAAATGGAAGACATTATCCATGAAAGGCTTTTGAGGGTAAACACCAAAGACTATGGAA
GATATGATCCTTCTCCAGCTTTTGTGAAGCCTCCTTTCAAGCTCATCCCCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATTAAAGCAATTGATCAAATAATTCTTTATAATTAACAACCACCTTTTAGCTTATCTATAAGACCCCATCACTTTGTCCAATTCAATGTCCCTTAAATCATACATAAGAA
AGCATCATTTGGGTCTATGCTCTTTGGAAAAACATAAGAAGAAGAAGAAAAAAATCCAACTTTGAAAAACACACATCATTATTAAAGTTGTTTCTATAATATGGGAGTCA
TGCTTATCAAGTATAAGCTCAGCTTCATCTTCATCCTCCTTCTTTCAACCTCCTTTTTATCCACCGTTTACACGGAAGGTCGACCTTCTAAGTTAGTTCATGAGGCTACT
AATGGTGGAGTTGTGCAGGATGCAAAGAAGAAGTCAAGAGGTGAAATGGAAGACATTATCCATGAAAGGCTTTTGAGGGTAAACACCAAAGACTATGGAAGATATGATCC
TTCTCCAGCTTTTGTGAAGCCTCCTTTCAAGCTCATCCCCAACTGAATTATACTATATATTAAAAAAAAAAAAATCCATCACCAACATGGACTCTTTCACTCACTATCTT
AGCTTATAAATAAATAATCAGAAATATATATCATGTTTTTCATAGTATAATAAGTAAAACATATTATCATATTATATATATAGTGTATAATGGTTGTCACATATATGAAT
ATATATAAAGCTTGTAATGTTTTTAGCTTGAGTAGTGCTACTCTACTATTATATGTTTTGTGAACTTTGGAGTAGGGTATTTTATGATTTTAGTCTCTACATGTACTTTA
CTACTTTTAATATAATACTAAGTTTGTTCTTGATTTC
Protein sequenceShow/hide protein sequence
MGVMLIKYKLSFIFILLLSTSFLSTVYTEGRPSKLVHEATNGGVVQDAKKKSRGEMEDIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN