; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000329 (gene) of Snake gourd v1 genome

Gene IDTan0000329
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG10:4685173..4685518
RNA-Seq ExpressionTan0000329
SyntenyTan0000329
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022841874.1 uncharacterized protein LOC111365549 [Olea europaea var. sylvestris]3.7e-0442.62Show/hide
Query:  MVFRDWSGNLIVAASEPFNYKLDPFSAEATTLLQGLKMAEQLAINHLWVESDCELLVKIIH
        ++  D  G +I+AAS P N  L+P   EA  L++GL++   L I+HL VESDC  LV  ++
Subjt:  MVFRDWSGNLIVAASEPFNYKLDPFSAEATTLLQGLKMAEQLAINHLWVESDCELLVKIIH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTTCGTGACTGGAGCGGAAACCTCATAGTTGCAGCATCAGAGCCCTTTAATTACAAGCTTGACCCCTTCTCTGCCGAGGCAACAACTCTCCTTCAGGGGTTGAA
GATGGCCGAACAATTAGCGATTAATCACTTGTGGGTTGAGTCGGATTGTGAGCTGCTGGTGAAGATCATCCATGCGCATGGGTACCAACAATCTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATTTAAAGAAGACAAACGTCCTACCGTCGGCTCGGGGAATACAGAAATACAGAGGTGGAAGCCTCTTGCACACGATACCATCAAACTCAATGTGGTTGCAGCATGCCATC
CAACAAATTTGACCACCGGATTTGGAATGGTCTTTCGTGACTGGAGCGGAAACCTCATAGTTGCAGCATCAGAGCCCTTTAATTACAAGCTTGACCCCTTCTCTGCCGAG
GCAACAACTCTCCTTCAGGGGTTGAAGATGGCCGAACAATTAGCGATTAATCACTTGTGGGTTGAGTCGGATTGTGAGCTGCTGGTGAAGATCATCCATGCGCATGGGTA
CCAACAATCTCCATAG
Protein sequenceShow/hide protein sequence
MVFRDWSGNLIVAASEPFNYKLDPFSAEATTLLQGLKMAEQLAINHLWVESDCELLVKIIHAHGYQQSP