; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000330 (gene) of Snake gourd v1 genome

Gene IDTan0000330
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionC2H2-like zinc finger protein
Genome locationLG07:2738557..2739015
RNA-Seq ExpressionTan0000330
SyntenyTan0000330
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588875.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]2.6e-5877.5Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP
        MADPAIYDFLSQTTASNS PK TSRKS  QYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL    PPP   TT HH  +P 
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP

Query:  PAA---APFLDEHWFHQNNHYRGNTT----AASTSASPDDISPNADAAIDHVTIDLTLRL
          A   +   DEHWFHQNNHYRG TT    +AS SASP+D+SPNADAA++HVTIDLTLRL
Subjt:  PAA---APFLDEHWFHQNNHYRGNTT----AASTSASPDDISPNADAAIDHVTIDLTLRL

KAG7022634.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-5877.02Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP
        MADPAIYDFLSQTTASNS PK TSRKS  QYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL    PPP    T +H+LA P
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP

Query:  P----AAAPFLDEHWFHQNNHYRGNTT----AASTSASPDDISPNADAAIDHVTIDLTLRL
             A +   DEHWFHQNNHYRG TT    +AS SASP+D+SPNADAA++HVTIDLTLRL
Subjt:  P----AAAPFLDEHWFHQNNHYRGNTT----AASTSASPDDISPNADAAIDHVTIDLTLRL

XP_022928226.1 protein LATE FLOWERING-like [Cucurbita moschata]4.4e-5878.85Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP
        MADPAIYDFLSQTTASNS PK TSRKS  QYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL    PPP   TT HH  +P 
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP

Query:  PAA---APFLDEHWFHQNNHYRGNTTAASTSASPDDISPNADAAIDHVTIDLTLRL
          A   +   DEHWFHQNNHYRG TT A  SASP+D+SPNADAA++HVTIDLTLRL
Subjt:  PAA---APFLDEHWFHQNNHYRGNTTAASTSASPDDISPNADAAIDHVTIDLTLRL

XP_022989523.1 protein LATE FLOWERING-like [Cucurbita maxima]1.8e-5978.85Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP
        MADPAIYDFLSQTTASNS PK TSRKS  QYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK FTSEILHLGSL    PPP   TT HH  +P 
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP

Query:  PAA---APFLDEHWFHQNNHYRGNTTAASTSASPDDISPNADAAIDHVTIDLTLRL
          A   +   DEHWFHQNNHYRG TT AS SASP+D+SPNADAA++HVTIDLTLRL
Subjt:  PAA---APFLDEHWFHQNNHYRGNTTAASTSASPDDISPNADAAIDHVTIDLTLRL

XP_023530190.1 zinc finger protein 7-like [Cucurbita pepo subsp. pepo]1.4e-5977.91Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP
        MADPAIYDFLSQT ASNS PK TSRKS  QYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLH   PPP  TT  +H+LA P
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP

Query:  ----PAAAPFLDEHWFHQNNHYRGNTT------AASTSASPDDISPNADAAIDHVTIDLTLRL
            PA +P  DEHWFHQNNHYRG TT      +AS SASP+D+SPNADAA++HVTIDLTLRL
Subjt:  ----PAAAPFLDEHWFHQNNHYRGNTT------AASTSASPDDISPNADAAIDHVTIDLTLRL

TrEMBL top hitse value%identityAlignment
A0A6J1DQT0 zinc finger protein 66.5e-3963.92Show/hide
Query:  MADPAIYDFLSQTTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGS---LHQPSPPPLTTTTDHHYLA
        MADPAIYDFLSQTT     PK SRKS  QYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK F S++LH      L+ P PPP +        A
Subjt:  MADPAIYDFLSQTTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGS---LHQPSPPPLTTTTDHHYLA

Query:  PPPAAAPFLDEHW--FHQNNHYRGNTTAASTSASPDD-ISPNADAAIDHVTIDLTLRL
         P  AA FLDEHW   HQN+H      A S++++P+D +SPNAD A+++VTIDLTLRL
Subjt:  PPPAAAPFLDEHW--FHQNNHYRGNTTAASTSASPDD-ISPNADAAIDHVTIDLTLRL

A0A6J1EJQ6 protein LATE FLOWERING-like2.1e-5878.85Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP
        MADPAIYDFLSQTTASNS PK TSRKS  QYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL    PPP   TT HH  +P 
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP

Query:  PAA---APFLDEHWFHQNNHYRGNTTAASTSASPDDISPNADAAIDHVTIDLTLRL
          A   +   DEHWFHQNNHYRG TT A  SASP+D+SPNADAA++HVTIDLTLRL
Subjt:  PAA---APFLDEHWFHQNNHYRGNTTAASTSASPDDISPNADAAIDHVTIDLTLRL

A0A6J1F843 protein LATE FLOWERING-like1.1e-5473.21Show/hide
Query:  MADPAIYDFLSQ-TTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYL---
        MADPAIYDFL+Q TTASNSAPK SRK   QYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGSL  P PPP TTTT HH+L   
Subjt:  MADPAIYDFLSQ-TTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYL---

Query:  ---------APPPAAAPFLDEHWFHQNNHYRGNTT---AASTSASPDDISPNADAAIDHVTIDLTLRL
                  P PA A FL +HWF+Q NHY  NTT   +AS SASPD +SPNAD A++HVTIDLTLRL
Subjt:  ---------APPPAAAPFLDEHWFHQNNHYRGNTT---AASTSASPDDISPNADAAIDHVTIDLTLRL

A0A6J1J5R2 protein LATE FLOWERING-like3.9e-5271.69Show/hide
Query:  MADPAIYDFLSQ-TTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYL---
        MADPAIYDFL+Q TTASNSAPK SRK   QYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGSL    P P TTT  HH+L   
Subjt:  MADPAIYDFLSQ-TTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYL---

Query:  -------APPPAAAPFLDEHWFHQNNHYRGN---TTAASTSASPDDISPNADAAIDHVTIDLTLRL
                P PA A FL +HWF+Q NHY  N   TT AS SASPD +SPN D A++HVTIDLTLRL
Subjt:  -------APPPAAAPFLDEHWFHQNNHYRGN---TTAASTSASPDDISPNADAAIDHVTIDLTLRL

A0A6J1JQI7 protein LATE FLOWERING-like8.7e-6078.85Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP
        MADPAIYDFLSQTTASNS PK TSRKS  QYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK FTSEILHLGSL    PPP   TT HH  +P 
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPP

Query:  PAA---APFLDEHWFHQNNHYRGNTTAASTSASPDDISPNADAAIDHVTIDLTLRL
          A   +   DEHWFHQNNHYRG TT AS SASP+D+SPNADAA++HVTIDLTLRL
Subjt:  PAA---APFLDEHWFHQNNHYRGNTTAASTSASPDDISPNADAAIDHVTIDLTLRL

SwissProt top hitse value%identityAlignment
Q39263 Zinc finger protein 41.0e-0953.57Show/hide
Query:  TTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        +T+ +S P+  ++  P   S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  TTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

Q39266 Zinc finger protein 75.1e-0939.81Show/hide
Query:  KSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTD-----------HHYLAPPPAAAPFLDEHWFHQ
        KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +      P T T+            HH L+ P      L   + HQ
Subjt:  KSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTD-----------HHYLAPPPAAAPFLDEHWFHQ

Query:  NNHYRGNT
           Y GNT
Subjt:  NNHYRGNT

Q42485 Zinc finger protein 11.5e-0855.77Show/hide
Query:  SAPKTSRKSH--PQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK
        S+  TS   H   Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Subjt:  SAPKTSRKSH--PQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK

Q9FFX4 Zinc finger protein KNUCKLES2.2e-1247.42Show/hide
Query:  PAIYDFLSQTTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPPP
        P+   F+      +S+ + S  S    +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L   SPP L    ++ +L P P
Subjt:  PAIYDFLSQTTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPPP

Q9FKA9 Protein LATE FLOWERING1.2e-1046.67Show/hide
Query:  KTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSLHQPSPPPLTTTTDHH
        K + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++        P  L++ + HH
Subjt:  KTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSLHQPSPPPLTTTTDHH

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 73.6e-1039.81Show/hide
Query:  KSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTD-----------HHYLAPPPAAAPFLDEHWFHQ
        KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +      P T T+            HH L+ P      L   + HQ
Subjt:  KSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTD-----------HHYLAPPPAAAPFLDEHWFHQ

Query:  NNHYRGNT
           Y GNT
Subjt:  NNHYRGNT

AT1G66140.1 zinc finger protein 47.3e-1153.57Show/hide
Query:  TTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        +T+ +S P+  ++  P   S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  TTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

AT1G80730.1 zinc-finger protein 11.1e-0955.77Show/hide
Query:  SAPKTSRKSH--PQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK
        S+  TS   H   Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Subjt:  SAPKTSRKSH--PQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein1.6e-1347.42Show/hide
Query:  PAIYDFLSQTTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPPP
        P+   F+      +S+ + S  S    +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L   SPP L    ++ +L P P
Subjt:  PAIYDFLSQTTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPPP

AT5G48890.1 C2H2-like zinc finger protein8.7e-1246.67Show/hide
Query:  KTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSLHQPSPPPLTTTTDHH
        K + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++        P  L++ + HH
Subjt:  KTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSLHQPSPPPLTTTTDHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATCCTGCTATTTACGACTTCCTCAGCCAAACAACAGCTTCCAATTCTGCACCGAAAACCTCGAGAAAATCTCACCCTCAATACTCTTCCTCCCGCATTTTCCC
ATGCCTTTACTGCCCTCGCAAATTCTACACTTCTCAAGCCCTAGGCGGCCATCAGAATGCTCACAAGAGAGAACGAGCCGCCTCTCGTAAGGCCTTCACTTCTGAAATTC
TTCATCTCGGTTCGCTTCACCAGCCGTCGCCGCCGCCGCTGACGACGACCACTGATCACCACTATCTTGCACCGCCGCCTGCTGCGGCGCCGTTTCTCGACGAGCATTGG
TTCCATCAGAATAATCACTATCGAGGTAATACCACCGCGGCCTCCACCTCCGCCTCGCCGGACGATATCTCTCCGAACGCTGATGCAGCCATTGATCATGTAACCATCGA
TCTCACTCTTCGCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATCCTGCTATTTACGACTTCCTCAGCCAAACAACAGCTTCCAATTCTGCACCGAAAACCTCGAGAAAATCTCACCCTCAATACTCTTCCTCCCGCATTTTCCC
ATGCCTTTACTGCCCTCGCAAATTCTACACTTCTCAAGCCCTAGGCGGCCATCAGAATGCTCACAAGAGAGAACGAGCCGCCTCTCGTAAGGCCTTCACTTCTGAAATTC
TTCATCTCGGTTCGCTTCACCAGCCGTCGCCGCCGCCGCTGACGACGACCACTGATCACCACTATCTTGCACCGCCGCCTGCTGCGGCGCCGTTTCTCGACGAGCATTGG
TTCCATCAGAATAATCACTATCGAGGTAATACCACCGCGGCCTCCACCTCCGCCTCGCCGGACGATATCTCTCCGAACGCTGATGCAGCCATTGATCATGTAACCATCGA
TCTCACTCTTCGCTTATAA
Protein sequenceShow/hide protein sequence
MADPAIYDFLSQTTASNSAPKTSRKSHPQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLHQPSPPPLTTTTDHHYLAPPPAAAPFLDEHW
FHQNNHYRGNTTAASTSASPDDISPNADAAIDHVTIDLTLRL