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Tan0000335 (gene) of Snake gourd v1 genome

Gene IDTan0000335
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCLAVATA3/ESR-RELATED 3
Genome locationLG01:108276270..108276663
RNA-Seq ExpressionTan0000335
SyntenyTan0000335
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55081.1 hypothetical protein Csa_012463 [Cucumis sativus]1.7e-1974.42Show/hide
Query:  CRVKLLFFYGLVVILLLCSSISESRLLIS-----SSSELVNKKNELFVKKNVKEILKVMIEEKEKLIGRHFVSKRLSPGGPDPRHH
        C VKL+ F+GLV+ILLLCSSISESRLL S     S S   NKKNELFV KN +E+LK +IEEKEKL GRHFVSKRLSPGGPDPRHH
Subjt:  CRVKLLFFYGLVVILLLCSSISESRLLIS-----SSSELVNKKNELFVKKNVKEILKVMIEEKEKLIGRHFVSKRLSPGGPDPRHH
TrEMBL top hitse value%identityAlignment
A0A0A0L4M1 Uncharacterized protein8.2e-2074.42Show/hide
Query:  CRVKLLFFYGLVVILLLCSSISESRLLIS-----SSSELVNKKNELFVKKNVKEILKVMIEEKEKLIGRHFVSKRLSPGGPDPRHH
        C VKL+ F+GLV+ILLLCSSISESRLL S     S S   NKKNELFV KN +E+LK +IEEKEKL GRHFVSKRLSPGGPDPRHH
Subjt:  CRVKLLFFYGLVVILLLCSSISESRLLIS-----SSSELVNKKNELFVKKNVKEILKVMIEEKEKLIGRHFVSKRLSPGGPDPRHH
SwissProt top hitse value%identityAlignment
Q3EDH8 CLAVATA3/ESR (CLE)-related protein 37.9e-0445.45Show/hide
Query:  LVVILLL-CSSISESRLLI-----SSSSELVNKKNELFVKKNVKEILKVMIEEKEKLIGRHFVSKRLSPGGPDPRHH
        LV++L+L  +S+ E R L+     S SS L   + ELF  + +KE +K   E +E ++G    SKRLSPGGPDPRHH
Subjt:  LVVILLL-CSSISESRLLI-----SSSSELVNKKNELFVKKNVKEILKVMIEEKEKLIGRHFVSKRLSPGGPDPRHH
Arabidopsis top hitse value%identityAlignment
AT1G06225.1 CLAVATA3/ESR-RELATED 35.6e-0545.45Show/hide
Query:  LVVILLL-CSSISESRLLI-----SSSSELVNKKNELFVKKNVKEILKVMIEEKEKLIGRHFVSKRLSPGGPDPRHH
        LV++L+L  +S+ E R L+     S SS L   + ELF  + +KE +K   E +E ++G    SKRLSPGGPDPRHH
Subjt:  LVVILLL-CSSISESRLLI-----SSSSELVNKKNELFVKKNVKEILKVMIEEKEKLIGRHFVSKRLSPGGPDPRHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTCGTGTAAAGTTGTTGTTTTTTTACGGCCTTGTGGTGATTTTGCTGTTGTGTTCTTCCATTTCTGAAAGCAGGTTGCTAATTTCTTCTTCATCTGAGTTAGT
GAATAAGAAAAATGAGTTATTTGTAAAGAAGAATGTGAAAGAAATCTTGAAGGTTATGATTGAAGAGAAAGAGAAGCTAATTGGAAGGCATTTTGTGTCAAAAAGACTCA
GCCCTGGAGGACCTGATCCACGCCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATTAAACTAGAATTTGTGTTTAATTAATGGCTTGTCGTGTAAAGTTGTTGTTTTTTTACGGCCTTGTGGTGATTTTGCTGTTGTGTTCTTCCATTTCTGAAAGCAGGTTG
CTAATTTCTTCTTCATCTGAGTTAGTGAATAAGAAAAATGAGTTATTTGTAAAGAAGAATGTGAAAGAAATCTTGAAGGTTATGATTGAAGAGAAAGAGAAGCTAATTGG
AAGGCATTTTGTGTCAAAAAGACTCAGCCCTGGAGGACCTGATCCACGCCATCATTGAACTTCTTTTTCTTCTCTGTGTATCTTTTCTTTTTTTCTTCTCCTTTTTTTTT
TTTTCATTTTGAGTGACTTTTTTGGTTTTGGTTCTAAGTTGTGACTTGAGAGAGAATAATCTTG
Protein sequenceShow/hide protein sequence
MACRVKLLFFYGLVVILLLCSSISESRLLISSSSELVNKKNELFVKKNVKEILKVMIEEKEKLIGRHFVSKRLSPGGPDPRHH