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Tan0000357 (gene) of Snake gourd v1 genome

Gene IDTan0000357
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionBromo domain-containing protein
Genome locationLG03:59131799..59136487
RNA-Seq ExpressionTan0000357
SyntenyTan0000357
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]2.2e-1564.56Show/hide
Query:  KKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQRLQESE
        +KLL+ K   S    Q+++G LDMNED+IFVQVFG EKHG VRGYG+GVTP ELF S+S V DLE  LNE E RL ESE
Subjt:  KKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQRLQESE

KAA0056079.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa]8.2e-1567.74Show/hide
Query:  NYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQ
        +Y  Q++DGTLDMN+D+IFVQ+ G EKH  VRGYG+GV  SELFGS+S V DLERRLNES++
Subjt:  NYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQ

KAF3956246.1 hypothetical protein CMV_018610 [Castanea mollissima]1.2e-1342.86Show/hide
Query:  NGQCMVKKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSAS-NVRDLERRLNESEQRLQESEQQR-------KIEV
        NGQ + +          N   Q+ +G L +++D++FV+VFG E+HGRVRGYG GVTP+ L+GS+S  + DLE+RL ESEQ+  ESE +R       K EV
Subjt:  NGQCMVKKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSAS-NVRDLERRLNESEQRLQESEQQR-------KIEV

Query:  QAFKD-------QIVELENHFEDRFKIMMAEMR
        +  K        Q+VE   HFE++    MAE R
Subjt:  QAFKD-------QIVELENHFEDRFKIMMAEMR

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]9.7e-1669.35Show/hide
Query:  NYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQ
        +Y  Q++DGTLDMN+D+IFVQ+FG EKH  VRGYG+GV  SELFGS+S V DLERRLNES++
Subjt:  NYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQ

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]3.7e-3162.7Show/hide
Query:  NGQCMVKKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQRLQESEQQRK-------IEVQ
        NG  + +   +K  +  +Y  Q++DGTLDMNEDE FV+VFG EKHG V GYG+GVTPSELFGS+S +RD ERRLNESEQRLQE EQQRK       +EV+
Subjt:  NGQCMVKKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQRLQESEQQRK-------IEVQ

Query:  AFKDQIVELENHFEDRFKIMMAEMRK
          K QI ELEN FEDRF+ MMAEM K
Subjt:  AFKDQIVELENHFEDRFKIMMAEMRK

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968284.7e-1669.35Show/hide
Query:  NYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQ
        +Y  Q++DGTLDMN+D+IFVQ+FG EKH  VRGYG+GV  SELFGS+S V DLERRLNES++
Subjt:  NYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQ

A0A2N9GVX9 Uncharacterized protein1.3e-1340Show/hide
Query:  NGQCMVKKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFG-SASNVRDLERRLNESEQRLQESEQQRKIEVQAFKDQI
        NGQ + +   +      N+  Q+  G+L M+EDE+FV+VFG E HGRVRGYG GVTP+EL+G S+S++RDL+R+L ESE++ +E++   + +++  +++ 
Subjt:  NGQCMVKKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFG-SASNVRDLERRLNESEQRLQESEQQRKIEVQAFKDQI

Query:  VELENHFEDRFKIMMAEMRK
         E + H     KI+ A++ +
Subjt:  VELENHFEDRFKIMMAEMRK

A0A2N9H9X0 Uncharacterized protein9.8e-1440Show/hide
Query:  NGQCMVKKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFG-SASNVRDLERRLNESEQRLQESEQQRKIEVQAFKDQI
        NGQ + +   +      N+  Q+ +G+L M EDE+FV+VFG E HGRVRGYG GVTP+EL+G S+S++RDL+R+L ESE++ +E++   + +++  +++ 
Subjt:  NGQCMVKKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFG-SASNVRDLERRLNESEQRLQESEQQRKIEVQAFKDQI

Query:  VELENHFEDRFKIMMAEMRK
         E + H     KI+ A++ +
Subjt:  VELENHFEDRFKIMMAEMRK

A0A5A7U8E9 Uncharacterized protein1.0e-1564.56Show/hide
Query:  KKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQRLQESE
        +KLL+ K   S    Q+++G LDMNED+IFVQVFG EKHG VRGYG+GVTP ELF S+S V DLE  LNE E RL ESE
Subjt:  KKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQRLQESE

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X24.0e-1567.74Show/hide
Query:  NYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQ
        +Y  Q++DGTLDMN+D+IFVQ+ G EKH  VRGYG+GV  SELFGS+S V DLERRLNES++
Subjt:  NYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNESEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30130.1 unknown protein1.3e-0785.19Show/hide
Query:  PWGERVSFVFNPNSDLVAKSLHVSPFM
        PWGERV+FVF+P SDLVAKSL VSPFM
Subjt:  PWGERVSFVFNPNSDLVAKSLHVSPFM

AT1G30130.2 unknown protein1.3e-0785.19Show/hide
Query:  PWGERVSFVFNPNSDLVAKSLHVSPFM
        PWGERV+FVF+P SDLVAKSL VSPFM
Subjt:  PWGERVSFVFNPNSDLVAKSLHVSPFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATGGGGTGAGAGAGTCTCATTTGTTTTCAATCCAAATTCTGATTTAGTAGCTAAGTCGTTGCATGTCAGTCCTTTTATGTTCCAAGTTATACTCAATGGACAATG
CATGGTGAAGAAACTACTCAAGAAAAAATGTCGTAACTCAAATTATATGCCTCAAATGGTTGATGGTACACTTGACATGAACGAGGACGAGATTTTTGTGCAAGTTTTTG
GACAAGAGAAGCATGGACGTGTTCGTGGTTATGGGATAGGTGTTACTCCTTCTGAGTTGTTTGGATCAGCTTCCAATGTACGTGATCTTGAGCGTCGTCTTAATGAGTCA
GAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAATTGAGGTACAAGCCTTCAAAGATCAAATTGTTGAATTAGAAAATCATTTTGAGGATAGATTTAAAATAATGAT
GGCAGAGATGCGTAAAAATAGTAACATTTGTTACTAA
mRNA sequenceShow/hide mRNA sequence
GTAGTTATTTGGCAAGATATGGGCATTTTGGGGAAGACAAGTGGGCCTACGGTTTTGCAAAAAGAATATTTCGTATTTTTTGTGAGTCTTCTTCATCCTCTTCAACCGCT
TCATCCTCTTCAGCCGCCCTCCTTCGTTTCGAACCTAGTTTCGCGCCCCAGTGCAACTTGCCCATCGACCACACAACAACCAGCCGATACGTTCCGGTCTGACCAGCGTA
ACCTCGCAGATCTTTTCATCACCCGTCACCAGCCTTCAGCCGGAGTTTCGTCCGAACCGTCCGCGACCATGACCACACGCAGGAGTCTCGATCGCCGTCACGCTCGCAGT
CGCGACCCACTGTTGACCAACCGAGCTTCACCGAAATGACTTGTTAAAGCTTATGGCTAGAGAAATACTTATGGCTAGAGAAATACCTTTACAAGAAAGTCAGTGTGAAA
GAGTTGTCTTCTGACGATTCCGACCAGTGTGGAATATGAACAAAATCCATTGAGTTACTGCTACGAAATCGAAGACTCTGTGCAGCACTTGAAGAAGTGCATAGTTGAGG
TGACAAATATGCCATGGGGTGAGAGAGTCTCATTTGTTTTCAATCCAAATTCTGATTTAGTAGCTAAGTCGTTGCATGTCAGTCCTTTTATGTTCCAAGTTATACTCAAT
GGACAATGCATGGTGAAGAAACTACTCAAGAAAAAATGTCGTAACTCAAATTATATGCCTCAAATGGTTGATGGTACACTTGACATGAACGAGGACGAGATTTTTGTGCA
AGTTTTTGGACAAGAGAAGCATGGACGTGTTCGTGGTTATGGGATAGGTGTTACTCCTTCTGAGTTGTTTGGATCAGCTTCCAATGTACGTGATCTTGAGCGTCGTCTTA
ATGAGTCAGAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAATTGAGGTACAAGCCTTCAAAGATCAAATTGTTGAATTAGAAAATCATTTTGAGGATAGATTTAAA
ATAATGATGGCAGAGATGCGTAAAAATAGTAACATTTGTTACTAATTGATTGTGTAGTAGTTAAATGTTCTAGAACTTTTGTAGTTATTTTGTCTAAATTGTAGTTATTT
TGTCTATACAAAAACATTTATGAGATCATGTCAAAATTGTTAGCTACTTTCCGATATCTAATTTTACATTCATCTTAAACTATTTTAATAGTAGTTACTATTACCCTTGC
CTATTCTTTCTATTCCATATTCTTGCACCTGTAATTCAAGGAATTACAGGTAAATAGATCAGTAGAGA
Protein sequenceShow/hide protein sequence
MPWGERVSFVFNPNSDLVAKSLHVSPFMFQVILNGQCMVKKLLKKKCRNSNYMPQMVDGTLDMNEDEIFVQVFGQEKHGRVRGYGIGVTPSELFGSASNVRDLERRLNES
EQRLQESEQQRKIEVQAFKDQIVELENHFEDRFKIMMAEMRKNSNICY