; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0000373 (gene) of Snake gourd v1 genome

Gene IDTan0000373
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L22-2
Genome locationLG09:9410328..9412176
RNA-Seq ExpressionTan0000373
SyntenyTan0000373
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588488.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5191.13Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRNVY  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

KAG6590443.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]5.5e-5190.32Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRNVY  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

XP_004135607.1 60S ribosomal protein L22-2 [Cucumis sativus]5.5e-5190.32Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRNVY  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

XP_022146066.1 60S ribosomal protein L22-2 [Momordica charantia]2.5e-5191.13Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRNVY  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

XP_022961443.1 60S ribosomal protein L22-2-like [Cucurbita moschata]5.5e-5190.32Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRNVY  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

TrEMBL top hitse value%identityAlignment
A0A5A7U6J1 60S ribosomal protein L22-22.7e-5190.32Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRNVY  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

A0A6J1CY92 60S ribosomal protein L22-21.2e-5191.13Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRNVY  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

A0A6J1F0W8 60S ribosomal protein L22-21.2e-5191.13Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRNVY  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

A0A6J1HVX5 60S ribosomal protein L22-2-like2.7e-5190.32Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRNVY  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

A0A6J1I4P7 60S ribosomal protein L22-21.2e-5191.13Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRNVY  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

SwissProt top hitse value%identityAlignment
Q90YU6 60S ribosomal protein L223.6e-2958.4Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        + +    G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG L G  VS+ R KSKITVTSD  FSKRYLKYLTKKYLKK+N+RDWLRV+
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  AANKDR-NVYLTQVLQHCREREEED
        A  K+   +   Q+ Q   E E+ED
Subjt:  AANKDR-NVYLTQVLQHCREREEED

Q98TF8 60S ribosomal protein L223.6e-2958.4Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI
        + +  A G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG L G  V++ R KSKITVTS+  FSKRYLKYLTKKYLKK+N+RDWLRV+
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVI

Query:  AANKDR-NVYLTQVLQHCREREEED
        A +K+   +   Q+ Q   E EEED
Subjt:  AANKDR-NVYLTQVLQHCREREEED

Q9FE58 60S ribosomal protein L22-31.0e-4780.65Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRN+Y  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

Q9M9W1 60S ribosomal protein L22-21.3e-4780.65Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRN+Y  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

Q9SRX7 Putative 60S ribosomal protein L22-18.0e-3771.82Show/hide
Query:  MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG++VS+TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IAANKDRNVY
        IA+NKD+NVY
Subjt:  IAANKDRNVY

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family5.7e-3871.82Show/hide
Query:  MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG++VS+TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IAANKDRNVY
        IA+NKD+NVY
Subjt:  IAANKDRNVY

AT3G05560.1 Ribosomal L22e protein family9.4e-4980.65Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRN+Y  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

AT3G05560.2 Ribosomal L22e protein family9.4e-4980.65Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRN+Y  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

AT3G05560.3 Ribosomal L22e protein family9.4e-4980.65Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRN+Y  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED

AT5G27770.1 Ribosomal L22e protein family7.2e-4980.65Show/hide
Query:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYLTQVLQHC-REREEED
        ANKDRN+Y  +       E EEED
Subjt:  ANKDRNVYLTQVLQHC-REREEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCGAGGAGGTGCAGCCGGCCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCAGTGGAAGATAAGATTATGGACATTGCTTCTCTGGA
GAAGTTTCTTCTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACCCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAATT
TCTCCAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGGGATTGGCTACGAGTGATCGCTGCCAACAAAGATAGGAATGTTTACTTAACT
CAGGTACTTCAACATTGCCGCGAGAGGGAGGAAGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATTTAAATGGACCATTTCGTTTTATAAACCCTAGGTCATCCATTATATTTTCGTTTAGAACCCTAGGTCATTGGGCGGCCGTAAGCCTCAACTTCTCTGCAGCAACTGGG
TTTCCTTCTGATTGCAGAGATTTTTGATCGAAAATGAGTCGAGGAGGTGCAGCCGGCCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCAGT
GGAAGATAAGATTATGGACATTGCTTCTCTGGAGAAGTTTCTTCTGGAGAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACCCGTGAGA
AGAGTAAAATTACCGTCACTTCTGACAGTAATTTCTCCAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACACAATGTGCGGGATTGGCTACGAGTGATC
GCTGCCAACAAAGATAGGAATGTTTACTTAACTCAGGTACTTCAACATTGCCGCGAGAGGGAGGAAGAGGATTAA
Protein sequenceShow/hide protein sequence
MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYLT
QVLQHCREREEED