CuGenDBv2

Gene ID	Tan0000403
Organism	Trichosanthes anguina (Snake gourd v1)
Description	F-box protein
Genome location	LG07:7750389..7754064
RNA-Seq Expression	Tan0000403
Synteny	Tan0000403
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579359.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]

7.9e-141

88.5

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Query:  DPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAH
        DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLLPEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAH
Subjt:  DPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAH

Query:  KRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIGNS
        KRRSKA QE KGS QLPQD LLHIF FLDIESLVSAGLVC SWN AADDEYLWQ QYTTFFGCSD   +PINDKD +D   S PHVDWKEAFK AY+GNS
Subjt:  KRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIGNS

Query:  LRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS
        L RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVL G++ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Subjt:  LRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS

KAG7016844.1 SPCC24B10.10c [Cucurbita argyrosperma subsp. argyrosperma]

1.6e-141

88.24

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Query:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV
        M+DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLLPEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMV
Subjt:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV

Query:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG
        AHKRRSKA QE KGS QLPQD LLHIF FLDIESLVSAGLVC SWN AADDEYLWQ QYTTFFGCSD   +PINDKD +D   S PHVDWKEAFK AY+G
Subjt:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG

Query:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS
        NSL RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVL G++ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Subjt:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS

XP_022922152.1 F-box protein At5g52880 isoform X1 [Cucurbita moschata]

1.6e-141

88.24

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Query:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV
        M+DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLLPEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMV
Subjt:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV

Query:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG
        AHKRRSKA QE KGS QLPQD LLHIF FLDIESLVSAGLVC SWN AADDEYLWQ QYTTFFGCSD   +PINDKD +D   S PHVDWKEAFK AY+G
Subjt:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG

Query:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS
        NSL RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVL G++ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Subjt:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS

XP_022973056.1 F-box protein At5g52880 isoform X1 [Cucurbita maxima]

2.5e-142

88.24

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Query:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV
        M+DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLLPEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMV
Subjt:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV

Query:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG
        AHKRRSKA QE KGS QLPQD LLHIF FLDIESLVSAGLVC SW+ AADDEYLWQ QYTTFFGCSD   +PIND+D +D   S PHVDWKEAFKRAY+G
Subjt:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG

Query:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS
        NSL RN YGRGYCKHCDTIVSFSTLRCPNDHGRNKN+QIKPLSINQVVEYVLNG +ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Subjt:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS

XP_038874449.1 F-box protein At5g52880 isoform X1 [Benincasa hispida]

1.8e-145

89.62

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Query:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV
        MSDPLERYQNLALTDSLAKSY YPLACKELSF+IRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSA SAAHLLAQGVEAALPKQKRNSAIVEFKKAMV
Subjt:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV

Query:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG
        AHKRRSKAHQEEKGS QLPQD LLHIF FLD++SLVSAGLVC SWNVAADDEYLWQLQYT FFGCSD+ SKPINDKD +DDF S  HVDWKE FK AYI 
Subjt:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG

Query:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS
        NSLRRNT GRGYC+HCDTIVS STLRCPNDHGRNKNKQIKPLSINQVVEYVLNGS ELIYSSDS+TDSDEVVISEFWA PKY G R P+
Subjt:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNE5 F-box domain-containing protein

8.6e-133

83.57

Show/hide

Query:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV
        MS+PLERY  L L D LAKSY YPLACKELSF+IRGAF KLPKNLQSLIY+HIITAFHLLPEMQTSSA SAA LLA+ VEAALPKQKRNS IVEFKKAMV
Subjt:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV

Query:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDF--TSMPHVDWKEAFKRAY
         HKRR+KAHQEEKGS QLPQD LLHIF F+D++SLVSAGLVC SWNVAA+DEYLWQLQYTTFF CSD+ SK INDKD  D F  +S P VDWKE FK+AY
Subjt:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDF--TSMPHVDWKEAFKRAY

Query:  IGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFG
        +GNSL RNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKN QIKPLSINQVVEYVLNG++ELIYSSDS+TDSDE VISEFWALPKY G
Subjt:  IGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFG

A0A1S3ATY4 F-box protein At5g52880 isoform X2

1.1e-116

83.79

Show/hide

Query:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV
        MS+PLERY  L+L DSL KSY YPLACKELSF+IRGAF KLPKNLQSLIYQHIITAFHLLPEMQTSSA SAA LLAQ VEAALPKQKRNS IVE+KKAMV
Subjt:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV

Query:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDF--TSMPHVDWKEAFKRAY
         HKRRSKAHQEEKGS QLPQD LLHIF FLD++SL SAGLVC SWNVAADDEYLWQLQYTTFFGC D+ SKPINDKD  DDF  +S PHVDWKE FK+AY
Subjt:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDF--TSMPHVDWKEAFKRAY

Query:  IGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYV
        +GNSL RNT GRGYCKHCDTIVSFSTLRC NDHGRNKNKQIKPLSINQ+V+ +
Subjt:  IGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYV

A0A1S3AUV1 F-box protein At5g52880 isoform X1

1.7e-136

85.42

Show/hide

Query:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV
        MS+PLERY  L+L DSL KSY YPLACKELSF+IRGAF KLPKNLQSLIYQHIITAFHLLPEMQTSSA SAA LLAQ VEAALPKQKRNS IVE+KKAMV
Subjt:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV

Query:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDF--TSMPHVDWKEAFKRAY
         HKRRSKAHQEEKGS QLPQD LLHIF FLD++SL SAGLVC SWNVAADDEYLWQLQYTTFFGC D+ SKPINDKD  DDF  +S PHVDWKE FK+AY
Subjt:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDF--TSMPHVDWKEAFKRAY

Query:  IGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRR
        +GNSL RNT GRGYCKHCDTIVSFSTLRC NDHGRNKNKQIKPLSINQVVEYVLNGS+ELIYSSDS+TDSDE VISEFWALPKY G R
Subjt:  IGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRR

A0A6J1E2E9 F-box protein At5g52880 isoform X1

7.7e-142

88.24

Show/hide

Query:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV
        M+DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLLPEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMV
Subjt:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV

Query:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG
        AHKRRSKA QE KGS QLPQD LLHIF FLDIESLVSAGLVC SWN AADDEYLWQ QYTTFFGCSD   +PINDKD +D   S PHVDWKEAFK AY+G
Subjt:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG

Query:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS
        NSL RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVL G++ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Subjt:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS

A0A6J1I7M6 F-box protein At5g52880 isoform X1

1.2e-142

88.24

Show/hide

Query:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV
        M+DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLLPEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMV
Subjt:  MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMV

Query:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG
        AHKRRSKA QE KGS QLPQD LLHIF FLDIESLVSAGLVC SW+ AADDEYLWQ QYTTFFGCSD   +PIND+D +D   S PHVDWKEAFKRAY+G
Subjt:  AHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIG

Query:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS
        NSL RN YGRGYCKHCDTIVSFSTLRCPNDHGRNKN+QIKPLSINQVVEYVLNG +ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Subjt:  NSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS

SwissProt top hits

e value

%identity

Alignment

Q5UPK8 Putative F-box protein L127

1.3e-05

42.86

Show/hide

Query:  LPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPI
        L ++ + HIFCFLD+ S +    VC  W   +DDE LW L Y  FFG +  I + I
Subjt:  LPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPI

Q969U6 F-box/WD repeat-containing protein 5

9.5e-04

26.14

Show/hide

Query:  EEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAY
        +E G+  LP   +  IF  L    +++AGLVC  W   + DE+LW+ Q+  ++  + ++ +                + W E F+R Y
Subjt:  EEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAY

Q9FLX3 F-box protein At5g52880

3.4e-54

45.71

Show/hide

Query:  LERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKR
        ++RYQNL + ++ +K+  YP AC ELS I+  A++  PKN+++LI+Q  ++AF LLP++ TS+AVSAA+LL + VEA LPKQK+N AIVEFK+A VA KR
Subjt:  LERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKR

Query:  RSKAHQEEKGSV-QLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYI-GNS
        RSK  +EE   +  LPQD L+HIF FL+I SLVS+  V  SWN A  +  LWQ Q+   F     I                  +DW+EAFK+AYI  NS
Subjt:  RSKAHQEEKGSV-QLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYI-GNS

Query:  LRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNK--NKQIKPLSINQVVEYVLNGSAELIYSSDSDTDS-DEVVISEFWAL
              GRGYC +CD+IV    LRC N   R K  NK +  ++ +QVV Y+L      I SSD +++S DE      W L
Subjt:  LRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNK--NKQIKPLSINQVVEYVLNGSAELIYSSDSDTDS-DEVVISEFWAL

Arabidopsis top hits

e value

%identity

Alignment

AT5G52880.1 F-box family protein

2.4e-55

45.71

Show/hide

Query:  LERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKR
        ++RYQNL + ++ +K+  YP AC ELS I+  A++  PKN+++LI+Q  ++AF LLP++ TS+AVSAA+LL + VEA LPKQK+N AIVEFK+A VA KR
Subjt:  LERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKR

Query:  RSKAHQEEKGSV-QLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYI-GNS
        RSK  +EE   +  LPQD L+HIF FL+I SLVS+  V  SWN A  +  LWQ Q+   F     I                  +DW+EAFK+AYI  NS
Subjt:  RSKAHQEEKGSV-QLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYI-GNS

Query:  LRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNK--NKQIKPLSINQVVEYVLNGSAELIYSSDSDTDS-DEVVISEFWAL
              GRGYC +CD+IV    LRC N   R K  NK +  ++ +QVV Y+L      I SSD +++S DE      W L
Subjt:  LRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNK--NKQIKPLSINQVVEYVLNGSAELIYSSDSDTDS-DEVVISEFWAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGGATCCATTAGAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTATCGCTACCCATTAGCTTGTAAGGAGCTAAGCTTCATTATCAGAGGCGC
TTTCAATAAACTCCCCAAAAATCTCCAATCCCTCATCTACCAACATATTATTACCGCCTTTCATCTCCTTCCGGAAATGCAGACGAGCTCGGCTGTTTCGGCTGCACATC
TCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATTGTAGAATTTAAAAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAG
GAAGAAAAAGGTTCTGTTCAACTGCCTCAAGATGCACTCCTCCACATCTTCTGCTTTCTAGATATCGAATCTTTAGTTTCGGCTGGGCTAGTCTGCTGGTCATGGAATGT
AGCAGCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATAACATCAGTAAACCCATTAATGATAAAGACGGCATGGATGACTTCACTA
GCATGCCTCATGTTGACTGGAAAGAGGCATTCAAGAGAGCATATATAGGTAATTCTTTGAGGAGAAACACATATGGAAGAGGATACTGCAAACACTGTGACACAATAGTT
TCCTTTAGTACCTTGAGATGTCCCAATGATCATGGAAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTTGTTGAATATGTGTTGAATGGTTCTGCAGA
ATTGATTTATTCTTCAGATAGTGATACTGATTCAGATGAAGTTGTAATTTCTGAGTTTTGGGCTCTTCCAAAGTATTTTGGCCGAAGGCACCCAAGTTCCTGA

mRNA sequence

Show/hide mRNA sequence

TTCTCCTTGTAATTATTCAGCAATCTTCCTTCAATTCGTTGTTCTCTGCTTCATCTTCATTTTTCTGTTTCCAGTTCCATTGCTCTGCTGCTCATTTCGATTCCCAATGT
CGGATCCATTAGAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTATCGCTACCCATTAGCTTGTAAGGAGCTAAGCTTCATTATCAGAGGCGCTTTC
AATAAACTCCCCAAAAATCTCCAATCCCTCATCTACCAACATATTATTACCGCCTTTCATCTCCTTCCGGAAATGCAGACGAGCTCGGCTGTTTCGGCTGCACATCTCCT
TGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATTGTAGAATTTAAAAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAG
AAAAAGGTTCTGTTCAACTGCCTCAAGATGCACTCCTCCACATCTTCTGCTTTCTAGATATCGAATCTTTAGTTTCGGCTGGGCTAGTCTGCTGGTCATGGAATGTAGCA
GCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATAACATCAGTAAACCCATTAATGATAAAGACGGCATGGATGACTTCACTAGCAT
GCCTCATGTTGACTGGAAAGAGGCATTCAAGAGAGCATATATAGGTAATTCTTTGAGGAGAAACACATATGGAAGAGGATACTGCAAACACTGTGACACAATAGTTTCCT
TTAGTACCTTGAGATGTCCCAATGATCATGGAAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTTGTTGAATATGTGTTGAATGGTTCTGCAGAATTG
ATTTATTCTTCAGATAGTGATACTGATTCAGATGAAGTTGTAATTTCTGAGTTTTGGGCTCTTCCAAAGTATTTTGGCCGAAGGCACCCAAGTTCCTGAGGCAAATTCAT
CGTTTATTGCTCGTCTTTTCACTCGTGACAATTGAATCCTTCTGTAAATAAGCGAAGTTATAAATACTAAAGGAGCAGATTGAAAGCTTTATTGTTGAAAAATATAATGT
AAAGAAATTCTATATAGGCAACTTTGATTGTGAAAATTATACCAATATCATTGAC

Protein sequence

Show/hide protein sequence

MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQ
EEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIV
SFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPSS

Tan0000403 (gene) of Snake gourd v1 genome